RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 HDGFL1Q5TGJ6 251 aa16.27■□□□□ 0.2
CLN6-225ENST00000638144 ZBTB3Q9H5J0 574 aa16.27■□□□□ 0.2
CLN6-225ENST00000638144 ANKRD31Q8N7Z5 1873 aa16.27■□□□□ 0.19
CLN6-225ENST00000638144 A0A0G2JLW4 131 aa16.26■□□□□ 0.19
CLN6-225ENST00000638144 YBX3P16989 372 aaKnown RBP eCLIP16.26■□□□□ 0.191e-7■■□□□ 13.8
CLN6-225ENST00000638144 C8orf58Q8NAV2 365 aa16.26■□□□□ 0.19
CLN6-225ENST00000638144 CHPF2Q9P2E5 772 aa16.26■□□□□ 0.19
CLN6-225ENST00000638144 DCAF8L1A6NGE4 600 aa16.25■□□□□ 0.19
CLN6-225ENST00000638144 FAM177BA6PVY3 158 aa16.25■□□□□ 0.19
CLN6-225ENST00000638144 CCER2I3L3R5 266 aa16.25■□□□□ 0.19
CLN6-225ENST00000638144 DPEP1P16444 411 aa16.25■□□□□ 0.19
CLN6-225ENST00000638144 KIF6Q6ZMV9 814 aa16.25■□□□□ 0.19
CLN6-225ENST00000638144 LRP10Q7Z4F1 713 aa16.25■□□□□ 0.19
CLN6-225ENST00000638144 TSPYL6Q8N831 410 aa16.25■□□□□ 0.19
CLN6-225ENST00000638144 BRCA1P38398 1863 aaKnown RBP16.25■□□□□ 0.19
CLN6-225ENST00000638144 ERBB4Q15303 1308 aa16.24■□□□□ 0.19
CLN6-225ENST00000638144 CHRNA5P30532 468 aa16.24■□□□□ 0.19
CLN6-225ENST00000638144 AIMP1Q12904 312 aaKnown RBP16.24■□□□□ 0.19
CLN6-225ENST00000638144 SPINK5Q9NQ38 1064 aaPredicted RBP16.24■□□□□ 0.19
CLN6-225ENST00000638144 MAP3K15Q6ZN16 1313 aa16.23■□□□□ 0.19
CLN6-225ENST00000638144 FANCIQ9NVI1 1328 aa16.23■□□□□ 0.19
CLN6-225ENST00000638144 COL11A2P13942 1736 aaPredicted RBP16.23■□□□□ 0.19
CLN6-225ENST00000638144 XAGE3Q8WTP9 111 aa16.23■□□□□ 0.19
CLN6-225ENST00000638144 SETDB2Q96T68 719 aa16.23■□□□□ 0.19
CLN6-225ENST00000638144 NIP7Q9Y221 180 aaKnown RBP eCLIP16.23■□□□□ 0.19
CLN6-225ENST00000638144 ZNF652Q9Y2D9 606 aa16.23■□□□□ 0.19
CLN6-225ENST00000638144 TCERG1O14776 1098 aaKnown RBP16.22■□□□□ 0.19
CLN6-225ENST00000638144 GPTP24298 496 aa16.22■□□□□ 0.19
CLN6-225ENST00000638144 PRR5LQ6MZQ0 368 aa16.22■□□□□ 0.19
CLN6-225ENST00000638144 COPS6Q7L5N1 327 aa16.22■□□□□ 0.19
CLN6-225ENST00000638144 ZNF428Q96B54 188 aa16.22■□□□□ 0.19
CLN6-225ENST00000638144 ANKRD36CQ5JPF3 1778 aa16.21■□□□□ 0.19
CLN6-225ENST00000638144 NPHP1O15259 732 aa16.21■□□□□ 0.19
CLN6-225ENST00000638144 HOXB7P09629 217 aa16.21■□□□□ 0.19
CLN6-225ENST00000638144 CLEC4GQ6UXB4 293 aa16.21■□□□□ 0.19
CLN6-225ENST00000638144 DDX21Q9NR30 783 aaKnown RBP eCLIP16.21■□□□□ 0.19
CLN6-225ENST00000638144 DLEC1Q9Y238 1755 aa16.21■□□□□ 0.18
CLN6-225ENST00000638144 IL16Q14005 1332 aa16.2■□□□□ 0.18
CLN6-225ENST00000638144 NBPF5PQ86XG9 351 aaPredicted RBP16.2■□□□□ 0.18
CLN6-225ENST00000638144 CNBD1Q8NA66 436 aa16.2■□□□□ 0.18
CLN6-225ENST00000638144 CACNA1SQ13698 1873 aa16.2■□□□□ 0.18
CLN6-225ENST00000638144 UBN2Q6ZU65 1347 aa16.19■□□□□ 0.18
CLN6-225ENST00000638144 CHD4Q14839 1912 aa16.19■□□□□ 0.18
CLN6-225ENST00000638144 ARFGEF2Q9Y6D5 1785 aa16.19■□□□□ 0.18
CLN6-225ENST00000638144 TNRC6CQ9HCJ0 1690 aaKnown RBP16.19■□□□□ 0.18
CLN6-225ENST00000638144 ERVV-1B6SEH8 477 aa16.19■□□□□ 0.18
CLN6-225ENST00000638144 KCNA3P22001 575 aa16.19■□□□□ 0.18
CLN6-225ENST00000638144 TGFB2P61812 414 aa16.19■□□□□ 0.18
CLN6-225ENST00000638144 NCBP3Q53F19 620 aaKnown RBP16.19■□□□□ 0.18
CLN6-225ENST00000638144 WDR63Q8IWG1 891 aa16.19■□□□□ 0.18
CLN6-225ENST00000638144 BCS1LQ9Y276 419 aa16.19■□□□□ 0.18
CLN6-225ENST00000638144 ATP10DQ9P241 1426 aa16.19■□□□□ 0.18
CLN6-225ENST00000638144 TWISTNBQ3B726 338 aaPredicted RBP16.18■□□□□ 0.18
CLN6-225ENST00000638144 PHAXQ9H814 394 aaKnown RBP16.18■□□□□ 0.18
CLN6-225ENST00000638144 DBF4Q9UBU7 674 aaPredicted RBP16.18■□□□□ 0.18
CLN6-225ENST00000638144 ZNF521Q96K83 1311 aa16.18■□□□□ 0.18
CLN6-225ENST00000638144 ABCC12Q96J65 1359 aa16.17■□□□□ 0.18
CLN6-225ENST00000638144 EXOSC9Q06265 439 aaKnown RBP16.17■□□□□ 0.18
CLN6-225ENST00000638144 GIGYF2Q6Y7W6 1299 aaKnown RBP16.17■□□□□ 0.18
CLN6-225ENST00000638144 NUTM1Q86Y26 1132 aa16.17■□□□□ 0.18
CLN6-225ENST00000638144 C2CD5Q86YS7 1000 aa16.17■□□□□ 0.18
CLN6-225ENST00000638144 ST5P78524 1137 aa16.16■□□□□ 0.18
CLN6-225ENST00000638144 ARFGEF1Q9Y6D6 1849 aa16.16■□□□□ 0.18
CLN6-225ENST00000638144 SUSD4Q5VX71 490 aa16.15■□□□□ 0.18
CLN6-225ENST00000638144 ZNF34Q8IZ26 560 aa16.15■□□□□ 0.18
CLN6-225ENST00000638144 HYPKQ9NX55 129 aa16.15■□□□□ 0.18
CLN6-225ENST00000638144 RGL2O15211 777 aa16.14■□□□□ 0.17
CLN6-225ENST00000638144 YY1P25490 414 aa16.14■□□□□ 0.17
CLN6-225ENST00000638144 GOLGA2Q08379 1002 aa16.14■□□□□ 0.17
CLN6-225ENST00000638144 ERFEQ4G0M1 354 aa16.14■□□□□ 0.17
CLN6-225ENST00000638144 CCDC30Q5VVM6 783 aa16.14■□□□□ 0.17
CLN6-225ENST00000638144 BRIP1Q9BX63 1249 aa16.14■□□□□ 0.17
CLN6-225ENST00000638144 PIM2Q9P1W9 311 aa16.14■□□□□ 0.17
CLN6-225ENST00000638144 H0YIN7 160 aa16.13■□□□□ 0.17
CLN6-225ENST00000638144 GTF2E1P29083 439 aaPredicted RBP16.13■□□□□ 0.17
CLN6-225ENST00000638144 DALRD3Q5D0E6 543 aaKnown RBP16.13■□□□□ 0.17
CLN6-225ENST00000638144 TPTE2Q6XPS3 522 aa16.13■□□□□ 0.17
CLN6-225ENST00000638144 ANKRD13DQ6ZTN6 518 aa16.13■□□□□ 0.17
CLN6-225ENST00000638144 ZNF622Q969S3 477 aaKnown RBP eCLIP16.13■□□□□ 0.17
CLN6-225ENST00000638144 CDCA7LQ96GN5 454 aa16.13■□□□□ 0.17
CLN6-225ENST00000638144 MYH16Q9H6N6 1097 aa16.13■□□□□ 0.17
CLN6-225ENST00000638144 ATP5J2-PTCD1G3V325 749 aa16.12■□□□□ 0.17
CLN6-225ENST00000638144 GRIN3BO60391 1043 aa16.12■□□□□ 0.17
CLN6-225ENST00000638144 NTSR2O95665 410 aa16.12■□□□□ 0.17
CLN6-225ENST00000638144 PDE6BP35913 854 aa16.12■□□□□ 0.17
CLN6-225ENST00000638144 G2E3Q7L622 706 aa16.12■□□□□ 0.17
CLN6-225ENST00000638144 PLBD2Q8NHP8 589 aa16.12■□□□□ 0.17
CLN6-225ENST00000638144 STK31Q9BXU1 1019 aa16.12■□□□□ 0.17
CLN6-225ENST00000638144 ZNF219Q9P2Y4 722 aaPredicted RBP16.12■□□□□ 0.17
CLN6-225ENST00000638144 SLX4Q8IY92 1834 aa16.11■□□□□ 0.17
CLN6-225ENST00000638144 VAMP4O75379 141 aa16.11■□□□□ 0.17
CLN6-225ENST00000638144 TCIRG1Q13488 830 aa16.11■□□□□ 0.17
CLN6-225ENST00000638144 SYNE4Q8N205 404 aa16.11■□□□□ 0.17
CLN6-225ENST00000638144 LAMB2P55268 1798 aa16.1■□□□□ 0.17
CLN6-225ENST00000638144 ARHGAP27Q6ZUM4 889 aa16.1■□□□□ 0.17
CLN6-225ENST00000638144 C3orf67Q6ZVT6 689 aa16.1■□□□□ 0.17
CLN6-225ENST00000638144 RIC3Q7Z5B4 369 aa16.1■□□□□ 0.17
CLN6-225ENST00000638144 NLRP10Q86W26 655 aa16.1■□□□□ 0.17
CLN6-225ENST00000638144 NYXQ9GZU5 481 aa16.1■□□□□ 0.17
CLN6-225ENST00000638144 IBTKQ9P2D0 1353 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 203.6 ms