RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 ZNF622Q969S3 477 aaKnown RBP eCLIP24.86■■□□□ 1.57
CLN6-221ENST00000637494 DLEC1Q9Y238 1755 aa24.85■■□□□ 1.57
CLN6-221ENST00000637494 KIF6Q6ZMV9 814 aa24.85■■□□□ 1.57
CLN6-221ENST00000637494 NGEFQ8N5V2 710 aa24.85■■□□□ 1.57
CLN6-221ENST00000637494 RRP7AQ9Y3A4 280 aaKnown RBP24.85■■□□□ 1.57
CLN6-221ENST00000637494 SENP3-EIF4A1A0A087X0R7 540 aa24.84■■□□□ 1.57
CLN6-221ENST00000637494 CCDC24Q8N4L8 307 aa24.84■■□□□ 1.57
CLN6-221ENST00000637494 RNF181Q9P0P0 153 aa24.84■■□□□ 1.57
CLN6-221ENST00000637494 NIP7Q9Y221 180 aaKnown RBP eCLIP24.84■■□□□ 1.57
CLN6-221ENST00000637494 TPTE2Q6XPS3 522 aa24.83■■□□□ 1.57
CLN6-221ENST00000637494 MYL6BP14649 208 aa24.82■■□□□ 1.56
CLN6-221ENST00000637494 ADAMTS8Q9UP79 889 aa24.82■■□□□ 1.56
CLN6-221ENST00000637494 ERBB4Q15303 1308 aa24.82■■□□□ 1.56
CLN6-221ENST00000637494 GTF2E1P29083 439 aaPredicted RBP24.81■■□□□ 1.56
CLN6-221ENST00000637494 ERVV-1B6SEH8 477 aa24.8■■□□□ 1.56
CLN6-221ENST00000637494 CNKSR1Q969H4 720 aa24.8■■□□□ 1.56
CLN6-221ENST00000637494 ANKRD31Q8N7Z5 1873 aa24.79■■□□□ 1.56
CLN6-221ENST00000637494 FAM177BA6PVY3 158 aa24.78■■□□□ 1.56
CLN6-221ENST00000637494 EIF2S2P20042 333 aaKnown RBP24.78■■□□□ 1.56
CLN6-221ENST00000637494 STYK1Q6J9G0 422 aa24.78■■□□□ 1.56
CLN6-221ENST00000637494 MASTLQ96GX5 879 aa24.78■■□□□ 1.56
CLN6-221ENST00000637494 LAS1LQ9Y4W2 734 aaKnown RBP24.78■■□□□ 1.56
CLN6-221ENST00000637494 MAP3K15Q6ZN16 1313 aa24.78■■□□□ 1.56
CLN6-221ENST00000637494 LMNB1P20700 586 aa24.77■■□□□ 1.56
CLN6-221ENST00000637494 HLFQ16534 295 aa24.77■■□□□ 1.56
CLN6-221ENST00000637494 NYXQ9GZU5 481 aa24.77■■□□□ 1.56
CLN6-221ENST00000637494 KDM2BQ8NHM5 1336 aa24.77■■□□□ 1.56
CLN6-221ENST00000637494 SRGNP10124 158 aa24.76■■□□□ 1.55
CLN6-221ENST00000637494 RASSF7Q02833 373 aa24.76■■□□□ 1.55
CLN6-221ENST00000637494 C21orf2O43822 256 aa24.75■■□□□ 1.55
CLN6-221ENST00000637494 SOGA3Q5TF21 947 aa24.75■■□□□ 1.55
CLN6-221ENST00000637494 ZNF219Q9P2Y4 722 aaPredicted RBP24.75■■□□□ 1.55
CLN6-221ENST00000637494 ZC3H4Q9UPT8 1303 aaKnown RBP24.75■■□□□ 1.55
CLN6-221ENST00000637494 TTLL7Q6ZT98 887 aa24.74■■□□□ 1.55
CLN6-221ENST00000637494 ZBTB3Q9H5J0 574 aa24.74■■□□□ 1.55
CLN6-221ENST00000637494 TRIM35Q9UPQ4 493 aa24.74■■□□□ 1.55
CLN6-221ENST00000637494 COL11A2P13942 1736 aaPredicted RBP24.73■■□□□ 1.55
CLN6-221ENST00000637494 KIF3CO14782 793 aa24.73■■□□□ 1.55
CLN6-221ENST00000637494 NPR1P16066 1061 aa24.73■■□□□ 1.55
CLN6-221ENST00000637494 C16orf71Q8IYS4 520 aaPredicted RBP24.73■■□□□ 1.55
CLN6-221ENST00000637494 CHL1O00533 1208 aa24.72■■□□□ 1.55
CLN6-221ENST00000637494 PRPF40BQ6NWY9 871 aaKnown RBP24.72■■□□□ 1.55
CLN6-221ENST00000637494 SBF1O95248 1867 aa24.71■■□□□ 1.55
CLN6-221ENST00000637494 CALD1Q05682 793 aaKnown RBP24.71■■□□□ 1.55
CLN6-221ENST00000637494 GIGYF2Q6Y7W6 1299 aaKnown RBP24.7■■□□□ 1.54
CLN6-221ENST00000637494 NMRK2Q9NPI5 230 aa24.7■■□□□ 1.54
CLN6-221ENST00000637494 NFKBIEO00221 500 aa24.69■■□□□ 1.54
CLN6-221ENST00000637494 TOMM70O94826 608 aa24.69■■□□□ 1.54
CLN6-221ENST00000637494 GPTP24298 496 aa24.69■■□□□ 1.54
CLN6-221ENST00000637494 NECTIN2Q92692 538 aa24.69■■□□□ 1.54
CLN6-221ENST00000637494 NUP98P52948 1817 aa24.69■■□□□ 1.54
CLN6-221ENST00000637494 KLRG2A4D1S0 409 aaPredicted RBP24.68■■□□□ 1.54
CLN6-221ENST00000637494 ALDH1B1P30837 517 aa24.68■■□□□ 1.54
CLN6-221ENST00000637494 PPP1R42Q7Z4L9 355 aa24.68■■□□□ 1.54
CLN6-221ENST00000637494 CFAP44Q96MT7 982 aa24.68■■□□□ 1.54
CLN6-221ENST00000637494 TAOK3Q9H2K8 898 aa24.68■■□□□ 1.54
CLN6-221ENST00000637494 IBTKQ9P2D0 1353 aaPredicted RBP24.67■■□□□ 1.54
CLN6-221ENST00000637494 ZNF316A6NFI3 1004 aaPredicted RBP24.67■■□□□ 1.54
CLN6-221ENST00000637494 APAF1O14727 1248 aa24.67■■□□□ 1.54
CLN6-221ENST00000637494 PDIA6Q15084 440 aa24.67■■□□□ 1.54
CLN6-221ENST00000637494 PARP10Q53GL7 1025 aa24.67■■□□□ 1.54
CLN6-221ENST00000637494 HOXB7P09629 217 aa24.66■■□□□ 1.54
CLN6-221ENST00000637494 NUTM1Q86Y26 1132 aa24.66■■□□□ 1.54
CLN6-221ENST00000637494 DDX21Q9NR30 783 aaKnown RBP eCLIP24.66■■□□□ 1.54
CLN6-221ENST00000637494 CACNA1SQ13698 1873 aa24.66■■□□□ 1.54
CLN6-221ENST00000637494 LTBP3Q9NS15 1303 aa24.65■■□□□ 1.54
CLN6-221ENST00000637494 ARFGEF2Q9Y6D5 1785 aa24.65■■□□□ 1.54
CLN6-221ENST00000637494 HSPA6P17066 643 aa24.65■■□□□ 1.54
CLN6-221ENST00000637494 AIMP1Q12904 312 aaKnown RBP24.65■■□□□ 1.54
CLN6-221ENST00000637494 ERFEQ4G0M1 354 aa24.65■■□□□ 1.54
CLN6-221ENST00000637494 CCDC93Q567U6 631 aa24.65■■□□□ 1.54
CLN6-221ENST00000637494 HSP90AB3PQ58FF7 597 aa24.65■■□□□ 1.54
CLN6-221ENST00000637494 HDGFL1Q5TGJ6 251 aa24.65■■□□□ 1.54
CLN6-221ENST00000637494 DPY19L2Q6NUT2 758 aa24.65■■□□□ 1.54
CLN6-221ENST00000637494 ZNF34Q8IZ26 560 aa24.65■■□□□ 1.54
CLN6-221ENST00000637494 ANXA1P04083 346 aa24.64■■□□□ 1.54
CLN6-221ENST00000637494 COPS6Q7L5N1 327 aa24.64■■□□□ 1.54
CLN6-221ENST00000637494 RPGRQ92834 1020 aaKnown RBP24.64■■□□□ 1.54
CLN6-221ENST00000637494 RRAGCQ9HB90 399 aa24.64■■□□□ 1.54
CLN6-221ENST00000637494 UBN2Q6ZU65 1347 aa24.63■■□□□ 1.53
CLN6-221ENST00000637494 SLX4Q8IY92 1834 aa24.63■■□□□ 1.53
CLN6-221ENST00000637494 TNRC6CQ9HCJ0 1690 aaKnown RBP24.63■■□□□ 1.53
CLN6-221ENST00000637494 GLTPD2A6NH11 291 aa24.63■■□□□ 1.53
CLN6-221ENST00000637494 ANP32CO43423 234 aa24.63■■□□□ 1.53
CLN6-221ENST00000637494 GNAI1P63096 354 aa24.63■■□□□ 1.53
CLN6-221ENST00000637494 PROSER3Q2NL68 480 aa24.63■■□□□ 1.53
CLN6-221ENST00000637494 SUSD4Q5VX71 490 aa24.63■■□□□ 1.53
CLN6-221ENST00000637494 LRP10Q7Z4F1 713 aa24.63■■□□□ 1.53
CLN6-221ENST00000637494 XAGE3Q8WTP9 111 aa24.63■■□□□ 1.53
CLN6-221ENST00000637494 TIAM2Q8IVF5 1701 aa24.62■■□□□ 1.53
CLN6-221ENST00000637494 PRELPP51888 382 aa24.62■■□□□ 1.53
CLN6-221ENST00000637494 KRT24Q2M2I5 525 aa24.62■■□□□ 1.53
CLN6-221ENST00000637494 IFT57Q9NWB7 429 aa24.62■■□□□ 1.53
CLN6-221ENST00000637494 FER1L6Q2WGJ9 1857 aa24.62■■□□□ 1.53
CLN6-221ENST00000637494 RTKN2Q8IZC4 609 aa24.61■■□□□ 1.53
CLN6-221ENST00000637494 RBM46Q8TBY0 533 aaKnown RBP24.61■■□□□ 1.53
CLN6-221ENST00000637494 UTP14AQ9BVJ6 771 aaKnown RBP24.61■■□□□ 1.53
CLN6-221ENST00000637494 MBIPQ9NS73 344 aa24.61■■□□□ 1.53
CLN6-221ENST00000637494 DBF4Q9UBU7 674 aaPredicted RBP24.61■■□□□ 1.53
CLN6-221ENST00000637494 ABCC12Q96J65 1359 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms