RNA–Protein interactions for RNA: ENST00000636769.1

SCN2A-213, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-213ENST00000636769 KDM4AO75164 1064 aa7.02□□□□□ -1.29
SCN2A-213ENST00000636769 INTS4Q96HW7 963 aaKnown RBP7.02□□□□□ -1.29
SCN2A-213ENST00000636769 PRIM1P49642 420 aaKnown RBP7.02□□□□□ -1.29
SCN2A-213ENST00000636769 ZNF445P59923 1031 aa7.02□□□□□ -1.29
SCN2A-213ENST00000636769 CCDC102BQ68D86 513 aa7.02□□□□□ -1.29
SCN2A-213ENST00000636769 TBC1D9Q6ZT07 1266 aa7.02□□□□□ -1.29
SCN2A-213ENST00000636769 RNF168Q8IYW5 571 aaPredicted RBP7.02□□□□□ -1.29
SCN2A-213ENST00000636769 JADE2Q9NQC1 790 aa7.02□□□□□ -1.29
SCN2A-213ENST00000636769 AQRO60306 1485 aaKnown RBP eCLIP7.02□□□□□ -1.29
SCN2A-213ENST00000636769 CLNS1AP54105 237 aaKnown RBP7.02□□□□□ -1.29
SCN2A-213ENST00000636769 KRT83P78385 493 aa7.02□□□□□ -1.29
SCN2A-213ENST00000636769 AIMP1Q12904 312 aaKnown RBP7.02□□□□□ -1.29
SCN2A-213ENST00000636769 CCDC184Q52MB2 194 aa7.02□□□□□ -1.29
SCN2A-213ENST00000636769 ZNF622Q969S3 477 aaKnown RBP eCLIP7.02□□□□□ -1.29
SCN2A-213ENST00000636769 TTC12Q9H892 705 aaPredicted RBP7.02□□□□□ -1.29
SCN2A-213ENST00000636769 RBM27Q9P2N5 1060 aaKnown RBP7.02□□□□□ -1.29
SCN2A-213ENST00000636769 NPHP3Q7Z494 1330 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 KIF4AO95239 1232 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 BANK1Q8NDB2 785 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 NECTIN2Q92692 538 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 DMTNQ08495 405 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 C8orf34Q49A92 452 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 AEBP2Q6ZN18 517 aaPredicted RBP7.01□□□□□ -1.29
SCN2A-213ENST00000636769 MIPOL1Q8TD10 442 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 AFAP1L1Q8TED9 768 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 PLVAPQ9BX97 442 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 GGNBP2Q9H3C7 697 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 SAMD15Q9P1V8 674 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 GRIN2BQ13224 1484 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 PRPHP41219 470 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 UBASH3AP57075 661 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 DHX37Q8IY37 1157 aaKnown RBP7.01□□□□□ -1.29
SCN2A-213ENST00000636769 GOPCQ9HD26 462 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 GJB2P29033 226 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 VAV2P52735 878 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 FAM184BQ9ULE4 1060 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 EFCAB5A4FU69 1503 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 TACC1O75410 805 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 MAP3K9P80192 1104 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 PRPF40BQ6NWY9 871 aaKnown RBP7.01□□□□□ -1.29
SCN2A-213ENST00000636769 CROCCP2Q86T23 111 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 AACSQ86V21 672 aa7.01□□□□□ -1.29
SCN2A-213ENST00000636769 GNL3LQ9NVN8 582 aaKnown RBP7.01□□□□□ -1.29
SCN2A-213ENST00000636769 SRGAP3O43295 1099 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 BMP15O95972 392 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 SH2D4BQ5SQS7 431 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 TTC39AQ5SRH9 613 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 KCNG4Q8TDN1 519 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 VCXQ9H320 206 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 RMND1Q9NWS8 449 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 RASAL2Q9UJF2 1139 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 ANO6Q4KMQ2 910 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 KRT86O43790 486 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 GIGYF1O75420 1035 aaPredicted RBP7□□□□□ -1.29
SCN2A-213ENST00000636769 CACNA2D3Q8IZS8 1091 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 SCLT1Q96NL6 688 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 UBAC1Q9BSL1 405 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 TOP2BQ02880 1626 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 SETDB1Q15047 1291 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 HDGFL1Q5TGJ6 251 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 CPLX4Q7Z7G2 160 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 TMX3Q96JJ7 454 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 RAB34Q9BZG1 259 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 EFCC1Q9HA90 598 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 SYT1P21579 422 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 UBE4AQ14139 1066 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 TSNAXIP1Q2TAA8 658 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 AP1ARQ63HQ0 302 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7□□□□□ -1.29
SCN2A-213ENST00000636769 SMC6Q96SB8 1091 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 FEZ2Q9UHY8 353 aaPredicted RBP7□□□□□ -1.29
SCN2A-213ENST00000636769 USH1CQ9Y6N9 552 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 PPFIA3O75145 1194 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 SEPT11Q9NVA2 429 aaKnown RBP7□□□□□ -1.29
SCN2A-213ENST00000636769 NCOA1Q15788 1441 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 KIAA0753Q2KHM9 967 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 C20orf194Q5TEA3 1177 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 DUSP27Q5VZP5 1158 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 SELENOOQ9BVL4 669 aa7□□□□□ -1.29
SCN2A-213ENST00000636769 CCDC38Q502W7 563 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 TTC22Q5TAA0 569 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 ATL3Q6DD88 541 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 GIMAP6Q6P9H5 292 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 ZNF830Q96NB3 372 aaPredicted RBP6.99□□□□□ -1.29
SCN2A-213ENST00000636769 CCDC172P0C7W6 258 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 KLHL34Q8N239 644 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 DRC1Q96MC2 740 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 TRIM7Q9C029 511 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 NOL3O60936 208 aaKnown RBP6.99□□□□□ -1.29
SCN2A-213ENST00000636769 ATP11AP98196 1134 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 TYRO3Q06418 890 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 USP48Q86UV5 1035 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 CCDC110Q8TBZ0 833 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 AMPD3Q01432 767 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 MLECQ14165 292 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 TDRD12Q587J7 1177 aaKnown RBP6.99□□□□□ -1.29
SCN2A-213ENST00000636769 LARP1Q6PKG0 1096 aaKnown RBP6.99□□□□□ -1.29
SCN2A-213ENST00000636769 ARHGAP45Q92619 1136 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 LRRC27Q9C0I9 530 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 FYB1O15117 783 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms