RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 ANKIB1Q9P2G1 1089 aa16.65■□□□□ 0.26
GABRB3-219ENST00000636466 MAGEC2Q9UBF1 373 aaPredicted RBP16.65■□□□□ 0.26
GABRB3-219ENST00000636466 TTC21AQ8NDW8 1320 aa16.65■□□□□ 0.26
GABRB3-219ENST00000636466 ANKRD18BA2A2Z9 1011 aa16.65■□□□□ 0.26
GABRB3-219ENST00000636466 POLR3DP05423 398 aaPredicted RBP16.65■□□□□ 0.26
GABRB3-219ENST00000636466 MICU3Q86XE3 530 aa16.65■□□□□ 0.26
GABRB3-219ENST00000636466 TRIM35Q9UPQ4 493 aa16.65■□□□□ 0.26
GABRB3-219ENST00000636466 STX6O43752 255 aa16.65■□□□□ 0.26
GABRB3-219ENST00000636466 CFAP100Q494V2 611 aa16.65■□□□□ 0.26
GABRB3-219ENST00000636466 BRF1Q92994 677 aa16.65■□□□□ 0.26
GABRB3-219ENST00000636466 ZPR1O75312 459 aa16.64■□□□□ 0.25
GABRB3-219ENST00000636466 ISM2Q6H9L7 571 aa16.64■□□□□ 0.25
GABRB3-219ENST00000636466 DDX17Q92841 729 aaKnown RBP16.64■□□□□ 0.25
GABRB3-219ENST00000636466 MAP3K12Q12852 859 aa16.64■□□□□ 0.25
GABRB3-219ENST00000636466 PATL2C9JE40 543 aaKnown RBP16.64■□□□□ 0.25
GABRB3-219ENST00000636466 IFIT3O14879 490 aaKnown RBP16.64■□□□□ 0.25
GABRB3-219ENST00000636466 SH2B1Q9NRF2 756 aaPredicted RBP16.64■□□□□ 0.25
GABRB3-219ENST00000636466 COL17A1Q9UMD9 1497 aaPredicted RBP16.64■□□□□ 0.25
GABRB3-219ENST00000636466 DNMT1P26358 1616 aaKnown RBP16.64■□□□□ 0.25
GABRB3-219ENST00000636466 CAVIN4Q5BKX8 364 aa16.64■□□□□ 0.25
GABRB3-219ENST00000636466 TANGO6Q9C0B7 1094 aa16.63■□□□□ 0.25
GABRB3-219ENST00000636466 SCAND2PQ9GZW5 306 aaPredicted RBP16.63■□□□□ 0.25
GABRB3-219ENST00000636466 PPFIBP1Q86W92 1011 aa16.63■□□□□ 0.25
GABRB3-219ENST00000636466 MKNK2Q9HBH9 465 aa16.63■□□□□ 0.25
GABRB3-219ENST00000636466 GRM8O00222 908 aa16.63■□□□□ 0.25
GABRB3-219ENST00000636466 NOL7Q9UMY1 257 aaKnown RBP16.63■□□□□ 0.25
GABRB3-219ENST00000636466 CEP85Q6P2H3 762 aa16.62■□□□□ 0.25
GABRB3-219ENST00000636466 ZSCAN30Q86W11 494 aa16.62■□□□□ 0.25
GABRB3-219ENST00000636466 CCDC112Q8NEF3 446 aa16.62■□□□□ 0.25
GABRB3-219ENST00000636466 PIK3C2GO75747 1445 aa16.62■□□□□ 0.25
GABRB3-219ENST00000636466 USP16Q9Y5T5 823 aa16.62■□□□□ 0.25
GABRB3-219ENST00000636466 SHANK2Q9UPX8 1470 aa16.62■□□□□ 0.25
GABRB3-219ENST00000636466 ZCRB1Q8TBF4 217 aaKnown RBP16.62■□□□□ 0.25
GABRB3-219ENST00000636466 FLT4P35916 1363 aa16.62■□□□□ 0.25
GABRB3-219ENST00000636466 HOXC9P31274 260 aa16.62■□□□□ 0.25
GABRB3-219ENST00000636466 HMGN5P82970 282 aaKnown RBP16.62■□□□□ 0.25
GABRB3-219ENST00000636466 ATP8B2P98198 1209 aa16.62■□□□□ 0.25
GABRB3-219ENST00000636466 HSP90B2PQ58FF3 399 aa16.61■□□□□ 0.25
GABRB3-219ENST00000636466 ESYT1Q9BSJ8 1104 aa16.61■□□□□ 0.25
GABRB3-219ENST00000636466 LGR6Q9HBX8 967 aa16.61■□□□□ 0.25
GABRB3-219ENST00000636466 ZNF652Q9Y2D9 606 aa16.61■□□□□ 0.25
GABRB3-219ENST00000636466 IL13P35225 146 aa16.61■□□□□ 0.25
GABRB3-219ENST00000636466 NEK1Q96PY6 1258 aa16.61■□□□□ 0.25
GABRB3-219ENST00000636466 UQCRHLA0A096LP55 91 aa16.61■□□□□ 0.25
GABRB3-219ENST00000636466 UQCRHP07919 91 aa16.61■□□□□ 0.25
GABRB3-219ENST00000636466 HSP90AB3PQ58FF7 597 aa16.61■□□□□ 0.25
GABRB3-219ENST00000636466 DZIP1Q86YF9 867 aaKnown RBP16.61■□□□□ 0.25
GABRB3-219ENST00000636466 MPHOSPH10O00566 681 aaKnown RBP16.6■□□□□ 0.25
GABRB3-219ENST00000636466 CCDC183Q5T5S1 534 aa16.6■□□□□ 0.25
GABRB3-219ENST00000636466 AKAP4Q5JQC9 854 aa16.6■□□□□ 0.25
GABRB3-219ENST00000636466 ZGPATQ8N5A5 531 aaKnown RBP16.6■□□□□ 0.25
GABRB3-219ENST00000636466 SMARCE1Q969G3 411 aa16.6■□□□□ 0.25
GABRB3-219ENST00000636466 RUFY1Q96T51 708 aa16.6■□□□□ 0.25
GABRB3-219ENST00000636466 DCTPP1Q9H773 170 aa16.6■□□□□ 0.25
GABRB3-219ENST00000636466 ZBTB7BO15156 539 aaPredicted RBP16.6■□□□□ 0.25
GABRB3-219ENST00000636466 HCLS1P14317 486 aaPredicted RBP16.6■□□□□ 0.25
GABRB3-219ENST00000636466 CPA1P15085 419 aa16.6■□□□□ 0.25
GABRB3-219ENST00000636466 GIMAP6Q6P9H5 292 aa16.6■□□□□ 0.25
GABRB3-219ENST00000636466 KSR2Q6VAB6 950 aa16.6■□□□□ 0.25
GABRB3-219ENST00000636466 SMC5Q8IY18 1101 aa16.6■□□□□ 0.25
GABRB3-219ENST00000636466 HELBQ8NG08 1087 aaPredicted RBP16.6■□□□□ 0.25
GABRB3-219ENST00000636466 RBM8AQ9Y5S9 174 aaKnown RBP16.6■□□□□ 0.25
GABRB3-219ENST00000636466 SLC12A7Q9Y666 1083 aa16.6■□□□□ 0.25
GABRB3-219ENST00000636466 CHST3Q7LGC8 479 aa16.6■□□□□ 0.25
GABRB3-219ENST00000636466 ORC3Q9UBD5 711 aaPredicted RBP16.6■□□□□ 0.25
GABRB3-219ENST00000636466 ARHGEF12Q9NZN5 1544 aa16.59■□□□□ 0.25
GABRB3-219ENST00000636466 FSIP1Q8NA03 581 aa16.59■□□□□ 0.25
GABRB3-219ENST00000636466 ABCC1P33527 1531 aa16.59■□□□□ 0.25
GABRB3-219ENST00000636466 SLC5A1P13866 664 aa16.59■□□□□ 0.25
GABRB3-219ENST00000636466 TEX35Q5T0J7 233 aa16.59■□□□□ 0.25
GABRB3-219ENST00000636466 PLEKHM2Q8IWE5 1019 aa16.59■□□□□ 0.25
GABRB3-219ENST00000636466 KLHDC4Q8TBB5 520 aa16.59■□□□□ 0.25
GABRB3-219ENST00000636466 GOLGA8AA7E2F4 631 aa16.58■□□□□ 0.25
GABRB3-219ENST00000636466 LTKP29376 864 aa16.58■□□□□ 0.25
GABRB3-219ENST00000636466 NPHP3Q7Z494 1330 aa16.58■□□□□ 0.25
GABRB3-219ENST00000636466 PUS7Q96PZ0 661 aaKnown RBP16.58■□□□□ 0.25
GABRB3-219ENST00000636466 C19orf44Q9H6X5 657 aa16.58■□□□□ 0.25
GABRB3-219ENST00000636466 C6orf229H3BNL8 230 aa16.58■□□□□ 0.24
GABRB3-219ENST00000636466 DEF6Q9H4E7 631 aa16.58■□□□□ 0.24
GABRB3-219ENST00000636466 TRMT1LQ7Z2T5 733 aaKnown RBP16.57■□□□□ 0.24
GABRB3-219ENST00000636466 ZNHIT6Q9NWK9 470 aaKnown RBP16.57■□□□□ 0.24
GABRB3-219ENST00000636466 FBXO3Q9UK99 471 aa16.57■□□□□ 0.24
GABRB3-219ENST00000636466 TBX22Q9Y458 520 aa16.57■□□□□ 0.24
GABRB3-219ENST00000636466 STIM1Q13586 685 aa16.57■□□□□ 0.24
GABRB3-219ENST00000636466 CTCFLQ8NI51 663 aaPredicted RBP16.57■□□□□ 0.24
GABRB3-219ENST00000636466 TRMT1Q9NXH9 659 aaKnown RBP16.57■□□□□ 0.24
GABRB3-219ENST00000636466 ODF2Q5BJF6 829 aa16.57■□□□□ 0.24
GABRB3-219ENST00000636466 IQCA1Q86XH1 822 aa16.57■□□□□ 0.24
GABRB3-219ENST00000636466 ABCA5Q8WWZ7 1642 aa16.57■□□□□ 0.24
GABRB3-219ENST00000636466 NOM1Q5C9Z4 860 aaKnown RBP16.57■□□□□ 0.24
GABRB3-219ENST00000636466 CNPY2Q9Y2B0 182 aa16.57■□□□□ 0.24
GABRB3-219ENST00000636466 ADGRL2O95490 1459 aa16.56■□□□□ 0.24
GABRB3-219ENST00000636466 TMEM67Q5HYA8 995 aa16.56■□□□□ 0.24
GABRB3-219ENST00000636466 LINS1Q8NG48 757 aa16.56■□□□□ 0.24
GABRB3-219ENST00000636466 VAT1LQ9HCJ6 419 aa16.56■□□□□ 0.24
GABRB3-219ENST00000636466 KDM6BO15054 1643 aa16.56■□□□□ 0.24
GABRB3-219ENST00000636466 HMGB1P09429 215 aaKnown RBP16.55■□□□□ 0.24
GABRB3-219ENST00000636466 CPLX3Q8WVH0 158 aa16.55■□□□□ 0.24
GABRB3-219ENST00000636466 WASF1Q92558 559 aa16.55■□□□□ 0.24
GABRB3-219ENST00000636466 CEP170Q5SW79 1584 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms