RNA–Protein interactions for RNA: ENST00000635991.1

CRNDE-213, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-213ENST00000635991 RBCK1Q9BYM8 510 aa8.35□□□□□ -1.07
CRNDE-213ENST00000635991 NPM2Q86SE8 214 aaKnown RBP8.34□□□□□ -1.07
CRNDE-213ENST00000635991 RGL4Q8IZJ4 473 aa8.34□□□□□ -1.07
CRNDE-213ENST00000635991 AIDAQ96BJ3 306 aa8.34□□□□□ -1.07
CRNDE-213ENST00000635991 IFT43Q96FT9 208 aa8.34□□□□□ -1.07
CRNDE-213ENST00000635991 ZFP42Q96MM3 310 aa8.34□□□□□ -1.07
CRNDE-213ENST00000635991 BRPF3Q9ULD4 1205 aa8.34□□□□□ -1.07
CRNDE-213ENST00000635991 NACADO15069 1562 aa8.34□□□□□ -1.07
CRNDE-213ENST00000635991 TGFBR3LH3BV60 316 aa8.33□□□□□ -1.08
CRNDE-213ENST00000635991 ATP4AP20648 1035 aa8.33□□□□□ -1.08
CRNDE-213ENST00000635991 PHKA2P46019 1235 aa8.33□□□□□ -1.08
CRNDE-213ENST00000635991 COL19A1Q14993 1142 aa8.33□□□□□ -1.08
CRNDE-213ENST00000635991 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.33□□□□□ -1.08
CRNDE-213ENST00000635991 C7orf43Q8WVR3 580 aa8.33□□□□□ -1.08
CRNDE-213ENST00000635991 TIMMDC1Q9NPL8 285 aa8.33□□□□□ -1.08
CRNDE-213ENST00000635991 FAM13BQ9NYF5 915 aa8.33□□□□□ -1.08
CRNDE-213ENST00000635991 KLK14Q9P0G3 267 aa8.33□□□□□ -1.08
CRNDE-213ENST00000635991 ANKIB1Q9P2G1 1089 aa8.33□□□□□ -1.08
CRNDE-213ENST00000635991 USP5P45974 858 aa8.32□□□□□ -1.08
CRNDE-213ENST00000635991 ETFBKMTQ8IXQ9 262 aa8.32□□□□□ -1.08
CRNDE-213ENST00000635991 FOXD4L4Q8WXT5 416 aaPredicted RBP8.32□□□□□ -1.08
CRNDE-213ENST00000635991 ATP13A2Q9NQ11 1180 aa8.32□□□□□ -1.08
CRNDE-213ENST00000635991 AAASQ9NRG9 546 aa8.32□□□□□ -1.08
CRNDE-213ENST00000635991 DYRK1BQ9Y463 629 aa8.32□□□□□ -1.08
CRNDE-213ENST00000635991 CECR2Q9BXF3 1484 aa8.32□□□□□ -1.08
CRNDE-213ENST00000635991 ANKRD33BA6NCL7 494 aa8.31□□□□□ -1.08
CRNDE-213ENST00000635991 FZD6O60353 706 aa8.31□□□□□ -1.08
CRNDE-213ENST00000635991 PDE3BQ13370 1112 aa8.31□□□□□ -1.08
CRNDE-213ENST00000635991 BICDL1Q6ZP65 573 aa8.31□□□□□ -1.08
CRNDE-213ENST00000635991 NPAS4Q8IUM7 802 aa8.31□□□□□ -1.08
CRNDE-213ENST00000635991 DNMT3LQ9UJW3 386 aa8.31□□□□□ -1.08
CRNDE-213ENST00000635991 RHOQP17081 205 aa8.3□□□□□ -1.08
CRNDE-213ENST00000635991 MZF1P28698 734 aaPredicted RBP8.3□□□□□ -1.08
CRNDE-213ENST00000635991 ZAP70P43403 619 aa8.3□□□□□ -1.08
CRNDE-213ENST00000635991 AAMPQ13685 434 aa8.3□□□□□ -1.08
CRNDE-213ENST00000635991 TREML1Q86YW5 311 aa8.3□□□□□ -1.08
CRNDE-213ENST00000635991 SUSD3Q96L08 255 aa8.3□□□□□ -1.08
CRNDE-213ENST00000635991 DMRTB1Q96MA1 342 aa8.3□□□□□ -1.08
CRNDE-213ENST00000635991 CRISPLD1Q9H336 500 aa8.3□□□□□ -1.08
CRNDE-213ENST00000635991 RBM47A0AV96 593 aaKnown RBP8.29□□□□□ -1.08
CRNDE-213ENST00000635991 FIGNL2A6NMB9 653 aa8.29□□□□□ -1.08
CRNDE-213ENST00000635991 ZBTB39O15060 712 aa8.29□□□□□ -1.08
CRNDE-213ENST00000635991 RPLP1P05386 114 aaKnown RBP8.29□□□□□ -1.08
CRNDE-213ENST00000635991 PCSK2P16519 638 aa8.29□□□□□ -1.08
CRNDE-213ENST00000635991 MSX1P28360 303 aa8.29□□□□□ -1.08
CRNDE-213ENST00000635991 LBRQ14739 615 aaKnown RBP8.29□□□□□ -1.08
CRNDE-213ENST00000635991 FAM26DQ5JW98 314 aa8.29□□□□□ -1.08
CRNDE-213ENST00000635991 SENP2Q9HC62 589 aa8.29□□□□□ -1.08
CRNDE-213ENST00000635991 NEUROD4Q9HD90 331 aa8.29□□□□□ -1.08
CRNDE-213ENST00000635991 BCS1LQ9Y276 419 aa8.29□□□□□ -1.08
CRNDE-213ENST00000635991 MAN1A2O60476 641 aa8.28□□□□□ -1.08
CRNDE-213ENST00000635991 F11P03951 625 aa8.28□□□□□ -1.08
CRNDE-213ENST00000635991 EHHADHQ08426 723 aa8.28□□□□□ -1.08
CRNDE-213ENST00000635991 ARSJQ5FYB0 599 aaPredicted RBP8.28□□□□□ -1.08
CRNDE-213ENST00000635991 TMC7Q7Z402 723 aa8.28□□□□□ -1.08
CRNDE-213ENST00000635991 GJD3Q8N144 294 aa8.28□□□□□ -1.08
CRNDE-213ENST00000635991 KIFC2Q96AC6 838 aa8.28□□□□□ -1.08
CRNDE-213ENST00000635991 ZIC5Q96T25 663 aa8.28□□□□□ -1.08
CRNDE-213ENST00000635991 FAM129BQ96TA1 746 aa8.28□□□□□ -1.08
CRNDE-213ENST00000635991 CCDC87Q9NVE4 849 aa8.28□□□□□ -1.08
CRNDE-213ENST00000635991 MICAL2O94851 1124 aa8.27□□□□□ -1.09
CRNDE-213ENST00000635991 NLRP8Q86W28 1048 aa8.27□□□□□ -1.09
CRNDE-213ENST00000635991 PGBD3Q8N328 593 aa8.27□□□□□ -1.09
CRNDE-213ENST00000635991 ALKBH8Q96BT7 664 aaKnown RBP8.27□□□□□ -1.09
CRNDE-213ENST00000635991 DMGDHQ9UI17 866 aaKnown RBP8.27□□□□□ -1.09
CRNDE-213ENST00000635991 A0A1W2PNR3 127 aa8.26□□□□□ -1.09
CRNDE-213ENST00000635991 ST8SIA5O15466 376 aa8.26□□□□□ -1.09
CRNDE-213ENST00000635991 TREHO43280 583 aa8.26□□□□□ -1.09
CRNDE-213ENST00000635991 PDGFAP04085 211 aa8.26□□□□□ -1.09
CRNDE-213ENST00000635991 RANGAP1P46060 587 aaPredicted RBP8.26□□□□□ -1.09
CRNDE-213ENST00000635991 ARSDP51689 593 aa8.26□□□□□ -1.09
CRNDE-213ENST00000635991 SAMD5Q5TGI4 173 aa8.26□□□□□ -1.09
CRNDE-213ENST00000635991 ATCAYQ86WG3 371 aa8.26□□□□□ -1.09
CRNDE-213ENST00000635991 PIK3R5Q8WYR1 880 aa8.26□□□□□ -1.09
CRNDE-213ENST00000635991 HSH2DQ96JZ2 352 aa8.26□□□□□ -1.09
CRNDE-213ENST00000635991 BCL2L13Q9BXK5 485 aa8.26□□□□□ -1.09
CRNDE-213ENST00000635991 IRX2Q9BZI1 471 aaPredicted RBP8.26□□□□□ -1.09
CRNDE-213ENST00000635991 POLIQ9UNA4 740 aa8.26□□□□□ -1.09
CRNDE-213ENST00000635991 SENP3-EIF4A1A0A087X0R7 540 aa8.25□□□□□ -1.09
CRNDE-213ENST00000635991 EPB42P16452 691 aa8.25□□□□□ -1.09
CRNDE-213ENST00000635991 IDH3AP50213 366 aa8.25□□□□□ -1.09
CRNDE-213ENST00000635991 DNM1Q05193 864 aaKnown RBP8.25□□□□□ -1.09
CRNDE-213ENST00000635991 FMR1Q06787 632 aaKnown RBP eCLIP8.25□□□□□ -1.09
CRNDE-213ENST00000635991 EFHC2Q5JST6 749 aa8.25□□□□□ -1.09
CRNDE-213ENST00000635991 BTLAQ7Z6A9 289 aa8.25□□□□□ -1.09
CRNDE-213ENST00000635991 TMC1Q8TDI8 760 aa8.25□□□□□ -1.09
CRNDE-213ENST00000635991 EDEM1Q92611 657 aa8.25□□□□□ -1.09
CRNDE-213ENST00000635991 C11orf16Q9NQ32 467 aa8.25□□□□□ -1.09
CRNDE-213ENST00000635991 GJA3Q9Y6H8 435 aa8.25□□□□□ -1.09
CRNDE-213ENST00000635991 IGHA2P01877 340 aa8.24□□□□□ -1.09
CRNDE-213ENST00000635991 INPP5BP32019 993 aa8.24□□□□□ -1.09
CRNDE-213ENST00000635991 FGD1P98174 961 aa8.24□□□□□ -1.09
CRNDE-213ENST00000635991 ZNF280CQ8ND82 737 aa8.24□□□□□ -1.09
CRNDE-213ENST00000635991 RBM25P49756 843 aaKnown RBP8.23□□□□□ -1.09
CRNDE-213ENST00000635991 TYRO3Q06418 890 aa8.23□□□□□ -1.09
CRNDE-213ENST00000635991 ZNF326Q5BKZ1 582 aaKnown RBP8.23□□□□□ -1.09
CRNDE-213ENST00000635991 FIGNL1Q6PIW4 674 aa8.23□□□□□ -1.09
CRNDE-213ENST00000635991 LRRC69Q6ZNQ3 347 aa8.23□□□□□ -1.09
CRNDE-213ENST00000635991 FBXO33Q7Z6M2 555 aa8.23□□□□□ -1.09
CRNDE-213ENST00000635991 TTC16Q8NEE8 873 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms