RNA–Protein interactions for RNA: ENST00000635614.1

CD55-211, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 1,145 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-211ENST00000635614 PELP1Q8IZL8 1130 aaKnown RBP13.77□□□□□ -0.21
CD55-211ENST00000635614 IL17REQ8NFR9 667 aa13.77□□□□□ -0.21
CD55-211ENST00000635614 FMNL2Q96PY5 1086 aa13.77□□□□□ -0.21
CD55-211ENST00000635614 CHD4Q14839 1912 aa13.76□□□□□ -0.21
CD55-211ENST00000635614 MAPK8IP3Q9UPT6 1336 aa13.76□□□□□ -0.21
CD55-211ENST00000635614 BTBD11A6QL63 1104 aa13.76□□□□□ -0.21
CD55-211ENST00000635614 MMP10P09238 476 aa13.76□□□□□ -0.21
CD55-211ENST00000635614 TGFB2P61812 414 aa13.76□□□□□ -0.21
CD55-211ENST00000635614 DDX10Q13206 875 aaKnown RBP13.76□□□□□ -0.21
CD55-211ENST00000635614 SLC39A6Q13433 755 aa13.76□□□□□ -0.21
CD55-211ENST00000635614 PHACTR3Q96KR7 559 aa13.76□□□□□ -0.21
CD55-211ENST00000635614 CEMIPQ8WUJ3 1361 aa13.75□□□□□ -0.21
CD55-211ENST00000635614 CYP19A1P11511 503 aaPredicted RBP13.75□□□□□ -0.21
CD55-211ENST00000635614 ATN1P54259 1190 aaPredicted RBP13.75□□□□□ -0.21
CD55-211ENST00000635614 DNAJC10Q8IXB1 793 aa13.75□□□□□ -0.21
CD55-211ENST00000635614 PNISRQ8TF01 805 aaKnown RBP13.75□□□□□ -0.21
CD55-211ENST00000635614 ARIH1Q9Y4X5 557 aaPredicted RBP13.75□□□□□ -0.21
CD55-211ENST00000635614 GYS1P13807 737 aa13.74□□□□□ -0.21
CD55-211ENST00000635614 CAMK2BQ13554 666 aa13.74□□□□□ -0.21
CD55-211ENST00000635614 INTS5Q6P9B9 1019 aaKnown RBP13.74□□□□□ -0.21
CD55-211ENST00000635614 AMIGO3Q86WK7 504 aa13.74□□□□□ -0.21
CD55-211ENST00000635614 HEG1Q9ULI3 1381 aa13.73□□□□□ -0.21
CD55-211ENST00000635614 MYBBP1AQ9BQG0 1328 aaKnown RBP13.73□□□□□ -0.21
CD55-211ENST00000635614 USP42Q9H9J4 1324 aaKnown RBP13.73□□□□□ -0.21
CD55-211ENST00000635614 MYH14Q7Z406 1995 aaKnown RBP13.73□□□□□ -0.21
CD55-211ENST00000635614 ATMINO43313 823 aaPredicted RBP13.73□□□□□ -0.21
CD55-211ENST00000635614 TAF7Q15545 349 aaPredicted RBP13.73□□□□□ -0.21
CD55-211ENST00000635614 ASTLQ6HA08 431 aaPredicted RBP13.73□□□□□ -0.21
CD55-211ENST00000635614 NLGN2Q8NFZ4 835 aa13.73□□□□□ -0.21
CD55-211ENST00000635614 SOS1Q07889 1333 aaPredicted RBP13.72□□□□□ -0.21
CD55-211ENST00000635614 DPY19L2Q6NUT2 758 aa13.72□□□□□ -0.21
CD55-211ENST00000635614 PDCD7Q8N8D1 485 aaKnown RBP13.72□□□□□ -0.21
CD55-211ENST00000635614 ZNF496Q96IT1 587 aaPredicted RBP13.72□□□□□ -0.21
CD55-211ENST00000635614 NARFQ9UHQ1 456 aa13.72□□□□□ -0.21
CD55-211ENST00000635614 TJP1Q07157 1748 aa13.72□□□□□ -0.21
CD55-211ENST00000635614 UBR2Q8IWV8 1755 aa13.71□□□□□ -0.21
CD55-211ENST00000635614 KCPQ6ZWJ8 1503 aa13.71□□□□□ -0.21
CD55-211ENST00000635614 TULP1O00294 542 aaPredicted RBP13.71□□□□□ -0.21
CD55-211ENST00000635614 SNRPA1P09661 255 aaKnown RBP13.71□□□□□ -0.21
CD55-211ENST00000635614 LMOD3Q0VAK6 560 aa13.71□□□□□ -0.21
CD55-211ENST00000635614 SMIM5Q71RC9 77 aa13.71□□□□□ -0.21
CD55-211ENST00000635614 GPHNQ9NQX3 736 aaPredicted RBP13.71□□□□□ -0.21
CD55-211ENST00000635614 COL15A1P39059 1388 aa13.71□□□□□ -0.22
CD55-211ENST00000635614 TESPA1A2RU30 521 aaPredicted RBP13.7□□□□□ -0.22
CD55-211ENST00000635614 IL6STP40189 918 aaPredicted RBP13.7□□□□□ -0.22
CD55-211ENST00000635614 IRX5P78411 483 aaPredicted RBP13.7□□□□□ -0.22
CD55-211ENST00000635614 NFE2L2Q16236 605 aa13.7□□□□□ -0.22
CD55-211ENST00000635614 IER5LQ5T953 404 aa13.7□□□□□ -0.22
CD55-211ENST00000635614 SIPA1L3O60292 1781 aaPredicted RBP13.69□□□□□ -0.22
CD55-211ENST00000635614 SEMA3EO15041 775 aa13.69□□□□□ -0.22
CD55-211ENST00000635614 CANXP27824 592 aaKnown RBP13.69□□□□□ -0.22
CD55-211ENST00000635614 WDR43Q15061 677 aaKnown RBP eCLIP13.69□□□□□ -0.22
CD55-211ENST00000635614 MCM10Q7L590 875 aa13.69□□□□□ -0.22
CD55-211ENST00000635614 ZBTB1Q9Y2K1 713 aa13.69□□□□□ -0.22
CD55-211ENST00000635614 EIF5P55010 431 aaKnown RBP13.68□□□□□ -0.22
CD55-211ENST00000635614 USPL1Q5W0Q7 1092 aa13.68□□□□□ -0.22
CD55-211ENST00000635614 MICALL2Q8IY33 904 aa13.68□□□□□ -0.22
CD55-211ENST00000635614 PLEKHF1Q96S99 279 aa13.68□□□□□ -0.22
CD55-211ENST00000635614 PDZRN3Q9UPQ7 1066 aa13.68□□□□□ -0.22
CD55-211ENST00000635614 C4AP0C0L4 1744 aa13.67□□□□□ -0.22
CD55-211ENST00000635614 TM4SF1P30408 202 aa13.67□□□□□ -0.22
CD55-211ENST00000635614 PPP1R15BQ5SWA1 713 aa13.67□□□□□ -0.22
CD55-211ENST00000635614 BABAM1Q9NWV8 329 aa13.67□□□□□ -0.22
CD55-211ENST00000635614 SRP68Q9UHB9 627 aaKnown RBP13.67□□□□□ -0.22
CD55-211ENST00000635614 KIF13BQ9NQT8 1826 aa13.67□□□□□ -0.22
CD55-211ENST00000635614 YBX3P16989 372 aaKnown RBP eCLIP13.66□□□□□ -0.22
CD55-211ENST00000635614 OCEL1Q9H607 264 aa13.66□□□□□ -0.22
CD55-211ENST00000635614 PIM2Q9P1W9 311 aa13.66□□□□□ -0.22
CD55-211ENST00000635614 ZNF652Q9Y2D9 606 aa13.66□□□□□ -0.22
CD55-211ENST00000635614 C10orf71Q711Q0 1435 aa13.65□□□□□ -0.22
CD55-211ENST00000635614 CLEC4GQ6UXB4 293 aa13.65□□□□□ -0.22
CD55-211ENST00000635614 ZNF784Q8NCA9 323 aaPredicted RBP13.65□□□□□ -0.22
CD55-211ENST00000635614 ZNF330Q9Y3S2 320 aaPredicted RBP13.65□□□□□ -0.22
CD55-211ENST00000635614 POLRMTO00411 1230 aaKnown RBP13.64□□□□□ -0.23
CD55-211ENST00000635614 NPHP1O15259 732 aa13.64□□□□□ -0.23
CD55-211ENST00000635614 RIPK4P57078 832 aa13.64□□□□□ -0.23
CD55-211ENST00000635614 DCTN1Q14203 1278 aa13.64□□□□□ -0.23
CD55-211ENST00000635614 PRKRIP1Q9H875 184 aaPredicted RBP13.64□□□□□ -0.23
CD55-211ENST00000635614 A0A0G2JLW4 131 aa13.63□□□□□ -0.23
CD55-211ENST00000635614 SERPINB2P05120 415 aa13.63□□□□□ -0.23
CD55-211ENST00000635614 NFIXQ14938 502 aa13.63□□□□□ -0.23
CD55-211ENST00000635614 RUNDC1Q96C34 613 aa13.63□□□□□ -0.23
CD55-211ENST00000635614 SETDB2Q96T68 719 aa13.63□□□□□ -0.23
CD55-211ENST00000635614 TMEM121BQ9BXQ6 578 aaPredicted RBP13.63□□□□□ -0.23
CD55-211ENST00000635614 BCS1LQ9Y276 419 aa13.63□□□□□ -0.23
CD55-211ENST00000635614 USP16Q9Y5T5 823 aa13.63□□□□□ -0.23
CD55-211ENST00000635614 DLG5Q8TDM6 1919 aa13.62□□□□□ -0.23
CD55-211ENST00000635614 A1BGP04217 495 aa13.62□□□□□ -0.23
CD55-211ENST00000635614 DALRD3Q5D0E6 543 aaKnown RBP13.62□□□□□ -0.23
CD55-211ENST00000635614 DZIP3Q86Y13 1208 aaKnown RBP13.62□□□□□ -0.23
CD55-211ENST00000635614 PXDNLA1KZ92 1463 aa13.61□□□□□ -0.23
CD55-211ENST00000635614 CARMIL3Q8ND23 1372 aa13.61□□□□□ -0.23
CD55-211ENST00000635614 H0YIN7 160 aa13.61□□□□□ -0.23
CD55-211ENST00000635614 KCNQ3O43525 872 aa13.61□□□□□ -0.23
CD55-211ENST00000635614 GABBR2O75899 941 aa13.61□□□□□ -0.23
CD55-211ENST00000635614 DPEP1P16444 411 aa13.61□□□□□ -0.23
CD55-211ENST00000635614 PDE6BP35913 854 aa13.61□□□□□ -0.23
CD55-211ENST00000635614 TMPOP42166 694 aaKnown RBP13.61□□□□□ -0.23
CD55-211ENST00000635614 DDR1Q08345 913 aa13.61□□□□□ -0.23
CD55-211ENST00000635614 TSPYL4Q9UJ04 414 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms