RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 NIFKQ9BYG3 293 aaKnown RBP11.6□□□□□ -0.55
SMARCA2-239ENST00000635388 PARP3Q9Y6F1 533 aa11.6□□□□□ -0.55
SMARCA2-239ENST00000635388 ABL1P00519 1130 aa11.59□□□□□ -0.55
SMARCA2-239ENST00000635388 MTMR3Q13615 1198 aa11.59□□□□□ -0.55
SMARCA2-239ENST00000635388 MYO19Q96H55 970 aa11.59□□□□□ -0.55
SMARCA2-239ENST00000635388 ANO2Q9NQ90 1003 aa11.59□□□□□ -0.55
SMARCA2-239ENST00000635388 CCDC9Q9Y3X0 531 aaKnown RBP11.59□□□□□ -0.55
SMARCA2-239ENST00000635388 SOS2Q07890 1332 aaPredicted RBP11.59□□□□□ -0.55
SMARCA2-239ENST00000635388 AXIN1O15169 862 aa11.58□□□□□ -0.56
SMARCA2-239ENST00000635388 MFAP1P55081 439 aaKnown RBP11.58□□□□□ -0.56
SMARCA2-239ENST00000635388 VTI1AQ96AJ9 217 aa11.58□□□□□ -0.56
SMARCA2-239ENST00000635388 GRIN2AQ12879 1464 aa11.57□□□□□ -0.56
SMARCA2-239ENST00000635388 H3BRB1 525 aa11.57□□□□□ -0.56
SMARCA2-239ENST00000635388 TNFRSF10BO14763 440 aa11.57□□□□□ -0.56
SMARCA2-239ENST00000635388 COX20Q5RI15 118 aa11.57□□□□□ -0.56
SMARCA2-239ENST00000635388 C16orf46Q6P387 395 aa11.57□□□□□ -0.56
SMARCA2-239ENST00000635388 TUT1Q9H6E5 874 aaKnown RBP11.57□□□□□ -0.56
SMARCA2-239ENST00000635388 LRFN2Q9ULH4 789 aa11.57□□□□□ -0.56
SMARCA2-239ENST00000635388 CHMP3Q9Y3E7 222 aa11.57□□□□□ -0.56
SMARCA2-239ENST00000635388 NPR3P17342 541 aa11.56□□□□□ -0.56
SMARCA2-239ENST00000635388 TXLNAP40222 546 aa11.56□□□□□ -0.56
SMARCA2-239ENST00000635388 PLA2G4AP47712 749 aa11.56□□□□□ -0.56
SMARCA2-239ENST00000635388 SCARF1Q14162 830 aa11.56□□□□□ -0.56
SMARCA2-239ENST00000635388 LAPTM4AQ15012 233 aa11.56□□□□□ -0.56
SMARCA2-239ENST00000635388 GNASQ5JWF2 1037 aa11.56□□□□□ -0.56
SMARCA2-239ENST00000635388 ALDH16A1Q8IZ83 802 aa11.56□□□□□ -0.56
SMARCA2-239ENST00000635388 ZFP42Q96MM3 310 aa11.56□□□□□ -0.56
SMARCA2-239ENST00000635388 AAASQ9NRG9 546 aa11.56□□□□□ -0.56
SMARCA2-239ENST00000635388 ZNF232Q9UNY5 417 aa11.56□□□□□ -0.56
SMARCA2-239ENST00000635388 FHAD1B1AJZ9 1412 aa11.55□□□□□ -0.56
SMARCA2-239ENST00000635388 TTLL8A6PVC2 850 aa11.55□□□□□ -0.56
SMARCA2-239ENST00000635388 ST8SIA5O15466 376 aa11.55□□□□□ -0.56
SMARCA2-239ENST00000635388 FKBP4Q02790 459 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMARCA2-239ENST00000635388 SF3B2Q13435 895 aaKnown RBP11.55□□□□□ -0.56
SMARCA2-239ENST00000635388 NBPF10Q6P3W6 841 aaKnown RBP11.55□□□□□ -0.56
SMARCA2-239ENST00000635388 HCN4Q9Y3Q4 1203 aa11.55□□□□□ -0.56
SMARCA2-239ENST00000635388 ARAP1Q96P48 1450 aa11.55□□□□□ -0.56
SMARCA2-239ENST00000635388 CEP170Q5SW79 1584 aa11.54□□□□□ -0.56
SMARCA2-239ENST00000635388 GTF2E1P29083 439 aaPredicted RBP11.54□□□□□ -0.56
SMARCA2-239ENST00000635388 POU4F2Q12837 409 aa11.54□□□□□ -0.56
SMARCA2-239ENST00000635388 CCDC27Q2M243 656 aa11.54□□□□□ -0.56
SMARCA2-239ENST00000635388 LYSMD3Q7Z3D4 306 aa11.54□□□□□ -0.56
SMARCA2-239ENST00000635388 C7orf43Q8WVR3 580 aa11.54□□□□□ -0.56
SMARCA2-239ENST00000635388 PHACTR1Q9C0D0 580 aa11.54□□□□□ -0.56
SMARCA2-239ENST00000635388 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.54□□□□□ -0.56
SMARCA2-239ENST00000635388 ARHGAP4P98171 946 aa11.53□□□□□ -0.56
SMARCA2-239ENST00000635388 RTN1Q16799 776 aa11.53□□□□□ -0.56
SMARCA2-239ENST00000635388 WDR44Q5JSH3 913 aa11.53□□□□□ -0.56
SMARCA2-239ENST00000635388 FAM26DQ5JW98 314 aa11.53□□□□□ -0.56
SMARCA2-239ENST00000635388 PRICKLE2Q7Z3G6 844 aa11.53□□□□□ -0.56
SMARCA2-239ENST00000635388 NGLY1Q96IV0 654 aa11.53□□□□□ -0.56
SMARCA2-239ENST00000635388 ATP13A2Q9NQ11 1180 aa11.53□□□□□ -0.56
SMARCA2-239ENST00000635388 DACH1Q9UI36 760 aa11.53□□□□□ -0.56
SMARCA2-239ENST00000635388 DNMT3LQ9UJW3 386 aa11.53□□□□□ -0.56
SMARCA2-239ENST00000635388 CUL7Q14999 1698 aa11.52□□□□□ -0.56
SMARCA2-239ENST00000635388 PHKA2P46019 1235 aa11.52□□□□□ -0.57
SMARCA2-239ENST00000635388 C1orf53Q5VUE5 145 aa11.52□□□□□ -0.57
SMARCA2-239ENST00000635388 GLYCTKQ8IVS8 523 aa11.52□□□□□ -0.57
SMARCA2-239ENST00000635388 ZDHHC3Q9NYG2 299 aa11.52□□□□□ -0.57
SMARCA2-239ENST00000635388 ATP4AP20648 1035 aa11.51□□□□□ -0.57
SMARCA2-239ENST00000635388 MPSTP25325 297 aa11.51□□□□□ -0.57
SMARCA2-239ENST00000635388 RGS22Q8NE09 1264 aa11.51□□□□□ -0.57
SMARCA2-239ENST00000635388 KLRG1Q96E93 195 aa11.51□□□□□ -0.57
SMARCA2-239ENST00000635388 NUP160Q12769 1436 aa11.51□□□□□ -0.57
SMARCA2-239ENST00000635388 RHOQP17081 205 aa11.5□□□□□ -0.57
SMARCA2-239ENST00000635388 FIGNL2A6NMB9 653 aa11.49□□□□□ -0.57
SMARCA2-239ENST00000635388 NOM1Q5C9Z4 860 aaKnown RBP11.49□□□□□ -0.57
SMARCA2-239ENST00000635388 KIF27Q86VH2 1401 aa11.49□□□□□ -0.57
SMARCA2-239ENST00000635388 SHROOM2Q13796 1616 aa11.49□□□□□ -0.57
SMARCA2-239ENST00000635388 DGKZQ13574 1117 aa11.48□□□□□ -0.57
SMARCA2-239ENST00000635388 NBPF1Q3BBV0 1214 aa11.48□□□□□ -0.57
SMARCA2-239ENST00000635388 DNAJC14Q6Y2X3 702 aaPredicted RBP11.48□□□□□ -0.57
SMARCA2-239ENST00000635388 KLK14Q9P0G3 267 aa11.48□□□□□ -0.57
SMARCA2-239ENST00000635388 STIM2Q9P246 746 aa11.48□□□□□ -0.57
SMARCA2-239ENST00000635388 BIN2Q9UBW5 565 aaPredicted RBP11.48□□□□□ -0.57
SMARCA2-239ENST00000635388 RUSC2Q8N2Y8 1516 aa11.48□□□□□ -0.57
SMARCA2-239ENST00000635388 CYB5RLQ6IPT4 315 aa11.47□□□□□ -0.57
SMARCA2-239ENST00000635388 IRX2Q9BZI1 471 aaPredicted RBP11.47□□□□□ -0.57
SMARCA2-239ENST00000635388 BCS1LQ9Y276 419 aa11.47□□□□□ -0.57
SMARCA2-239ENST00000635388 FAM13AO94988 1023 aa11.46□□□□□ -0.57
SMARCA2-239ENST00000635388 C11orf91Q3C1V1 193 aa11.46□□□□□ -0.57
SMARCA2-239ENST00000635388 ETFBKMTQ8IXQ9 262 aa11.46□□□□□ -0.57
SMARCA2-239ENST00000635388 SENP3-EIF4A1A0A087X0R7 540 aa11.45□□□□□ -0.58
SMARCA2-239ENST00000635388 A0A1B0GTH6 734 aa11.45□□□□□ -0.58
SMARCA2-239ENST00000635388 ZBTB39O15060 712 aa11.45□□□□□ -0.58
SMARCA2-239ENST00000635388 RHPN1Q8TCX5 695 aa11.45□□□□□ -0.58
SMARCA2-239ENST00000635388 AIDAQ96BJ3 306 aa11.45□□□□□ -0.58
SMARCA2-239ENST00000635388 TIMMDC1Q9NPL8 285 aa11.45□□□□□ -0.58
SMARCA2-239ENST00000635388 ERCC6L2Q5T890 1561 aa11.45□□□□□ -0.58
SMARCA2-239ENST00000635388 LCE2BO14633 110 aa11.44□□□□□ -0.58
SMARCA2-239ENST00000635388 BRD2P25440 801 aaKnown RBP11.44□□□□□ -0.58
SMARCA2-239ENST00000635388 EIF1AXP47813 144 aaKnown RBP11.44□□□□□ -0.58
SMARCA2-239ENST00000635388 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.44□□□□□ -0.584e-6■□□□□ 10.9
SMARCA2-239ENST00000635388 GPC6Q9Y625 555 aaPredicted RBP11.44□□□□□ -0.58
SMARCA2-239ENST00000635388 SOBPA7XYQ1 873 aa11.43□□□□□ -0.58
SMARCA2-239ENST00000635388 MSX1P28360 303 aa11.43□□□□□ -0.58
SMARCA2-239ENST00000635388 ABTB2Q8N961 1025 aa11.43□□□□□ -0.58
SMARCA2-239ENST00000635388 FZD6O60353 706 aa11.42□□□□□ -0.58
SMARCA2-239ENST00000635388 TATP17735 454 aaPredicted RBP11.42□□□□□ -0.58
SMARCA2-239ENST00000635388 MARSP56192 900 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms