RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 RGL2O15211 777 aa27.07■■□□□ 1.92
SF1-221ENST00000633899 YBX3P16989 372 aaKnown RBP eCLIP27.07■■□□□ 1.923e-8■■□□□ 11.9
SF1-221ENST00000633899 HDGFL1Q5TGJ6 251 aa27.07■■□□□ 1.92
SF1-221ENST00000633899 DPEP1P16444 411 aa27.06■■□□□ 1.92
SF1-221ENST00000633899 DUSP27Q5VZP5 1158 aa27.06■■□□□ 1.92
SF1-221ENST00000633899 MAP3K15Q6ZN16 1313 aa27.05■■□□□ 1.92
SF1-221ENST00000633899 BRCA1P38398 1863 aaKnown RBP27.04■■□□□ 1.92
SF1-221ENST00000633899 ERVV-1B6SEH8 477 aa27.04■■□□□ 1.92
SF1-221ENST00000633899 TTLL7Q6ZT98 887 aa27.04■■□□□ 1.92
SF1-221ENST00000633899 NIP7Q9Y221 180 aaKnown RBP eCLIP27.04■■□□□ 1.92
SF1-221ENST00000633899 ANXA1P04083 346 aa27.03■■□□□ 1.92
SF1-221ENST00000633899 YY1P25490 414 aa27.03■■□□□ 1.92
SF1-221ENST00000633899 CNBD1Q8NA66 436 aa27.03■■□□□ 1.92
SF1-221ENST00000633899 ZBTB3Q9H5J0 574 aa27.03■■□□□ 1.92
SF1-221ENST00000633899 ST5P78524 1137 aa27.02■■□□□ 1.92
SF1-221ENST00000633899 HLFQ16534 295 aa27.02■■□□□ 1.92
SF1-221ENST00000633899 PROSER3Q2NL68 480 aa27.02■■□□□ 1.92
SF1-221ENST00000633899 NBPF5PQ86XG9 351 aaPredicted RBP27.02■■□□□ 1.92
SF1-221ENST00000633899 DDX21Q9NR30 783 aaKnown RBP eCLIP27.02■■□□□ 1.92
SF1-221ENST00000633899 IL16Q14005 1332 aa27.01■■□□□ 1.91
SF1-221ENST00000633899 PDIA6Q15084 440 aa27.01■■□□□ 1.91
SF1-221ENST00000633899 PRR5LQ6MZQ0 368 aa27.01■■□□□ 1.91
SF1-221ENST00000633899 CHPF2Q9P2E5 772 aa27.01■■□□□ 1.91
SF1-221ENST00000633899 BCS1LQ9Y276 419 aa27.01■■□□□ 1.91
SF1-221ENST00000633899 CCER2I3L3R5 266 aa27■■□□□ 1.91
SF1-221ENST00000633899 ELL2O00472 640 aaPredicted RBP27■■□□□ 1.91
SF1-221ENST00000633899 CHRNA5P30532 468 aa27■■□□□ 1.91
SF1-221ENST00000633899 TSR2Q969E8 191 aaKnown RBP27■■□□□ 1.91
SF1-221ENST00000633899 PIM2Q9P1W9 311 aa27■■□□□ 1.91
SF1-221ENST00000633899 DBF4Q9UBU7 674 aaPredicted RBP27■■□□□ 1.91
SF1-221ENST00000633899 ANKRD31Q8N7Z5 1873 aa27■■□□□ 1.91
SF1-221ENST00000633899 GOLGB1Q14789 3259 aaKnown RBP26.99■■□□□ 1.91
SF1-221ENST00000633899 AIMP1Q12904 312 aaKnown RBP26.99■■□□□ 1.91
SF1-221ENST00000633899 DLEC1Q9Y238 1755 aa26.99■■□□□ 1.91
SF1-221ENST00000633899 DIEXFQ68CQ4 756 aaKnown RBP26.98■■□□□ 1.91
SF1-221ENST00000633899 WDR63Q8IWG1 891 aa26.98■■□□□ 1.91
SF1-221ENST00000633899 XAGE3Q8WTP9 111 aa26.98■■□□□ 1.91
SF1-221ENST00000633899 CHMP4AQ9BY43 222 aa26.98■■□□□ 1.91
SF1-221ENST00000633899 FAM177BA6PVY3 158 aa26.97■■□□□ 1.91
SF1-221ENST00000633899 PDE6BP35913 854 aa26.97■■□□□ 1.91
SF1-221ENST00000633899 COPS6Q7L5N1 327 aa26.97■■□□□ 1.91
SF1-221ENST00000633899 LRP10Q7Z4F1 713 aa26.97■■□□□ 1.91
SF1-221ENST00000633899 C2CD5Q86YS7 1000 aa26.97■■□□□ 1.91
SF1-221ENST00000633899 CCDC24Q8N4L8 307 aa26.97■■□□□ 1.91
SF1-221ENST00000633899 ATP10DQ9P241 1426 aa26.97■■□□□ 1.91
SF1-221ENST00000633899 ARFGEF1Q9Y6D6 1849 aa26.97■■□□□ 1.91
SF1-221ENST00000633899 H0YIN7 160 aa26.96■■□□□ 1.91
SF1-221ENST00000633899 GTF2E1P29083 439 aaPredicted RBP26.96■■□□□ 1.91
SF1-221ENST00000633899 DALRD3Q5D0E6 543 aaKnown RBP26.96■■□□□ 1.91
SF1-221ENST00000633899 TPTE2Q6XPS3 522 aa26.96■■□□□ 1.91
SF1-221ENST00000633899 C8orf58Q8NAV2 365 aa26.96■■□□□ 1.91
SF1-221ENST00000633899 BRIP1Q9BX63 1249 aa26.96■■□□□ 1.91
SF1-221ENST00000633899 PDZRN3Q9UPQ7 1066 aa26.96■■□□□ 1.91
SF1-221ENST00000633899 ANKRD36CQ5JPF3 1778 aa26.96■■□□□ 1.91
SF1-221ENST00000633899 UTRNP46939 3433 aa26.95■■□□□ 1.91
SF1-221ENST00000633899 KCNA3P22001 575 aa26.95■■□□□ 1.9
SF1-221ENST00000633899 GIGYF2Q6Y7W6 1299 aaKnown RBP26.95■■□□□ 1.9
SF1-221ENST00000633899 HYPKQ9NX55 129 aa26.95■■□□□ 1.9
SF1-221ENST00000633899 GPTP24298 496 aa26.94■■□□□ 1.9
SF1-221ENST00000633899 NYXQ9GZU5 481 aa26.94■■□□□ 1.9
SF1-221ENST00000633899 HSP90AB3PQ58FF7 597 aa26.92■■□□□ 1.9
SF1-221ENST00000633899 CCDC30Q5VVM6 783 aa26.92■■□□□ 1.9
SF1-221ENST00000633899 COL11A2P13942 1736 aaPredicted RBP26.92■■□□□ 1.9
SF1-221ENST00000633899 FANCIQ9NVI1 1328 aa26.91■■□□□ 1.9
SF1-221ENST00000633899 TWISTNBQ3B726 338 aaPredicted RBP26.9■■□□□ 1.9
SF1-221ENST00000633899 TSPYL6Q8N831 410 aa26.9■■□□□ 1.9
SF1-221ENST00000633899 ZNF622Q969S3 477 aaKnown RBP eCLIP26.9■■□□□ 1.91e-14■□□□□ 11.2
SF1-221ENST00000633899 CACNA1SQ13698 1873 aa26.89■■□□□ 1.9
SF1-221ENST00000633899 GOLGA2Q08379 1002 aa26.89■■□□□ 1.9
SF1-221ENST00000633899 PARP10Q53GL7 1025 aa26.89■■□□□ 1.9
SF1-221ENST00000633899 ZNF34Q8IZ26 560 aa26.89■■□□□ 1.9
SF1-221ENST00000633899 MYH16Q9H6N6 1097 aa26.89■■□□□ 1.9
SF1-221ENST00000633899 ARHGAP27Q6ZUM4 889 aa26.88■■□□□ 1.89
SF1-221ENST00000633899 PPP1R42Q7Z4L9 355 aa26.88■■□□□ 1.89
SF1-221ENST00000633899 TTLL6Q8N841 843 aa26.88■■□□□ 1.89
SF1-221ENST00000633899 STK31Q9BXU1 1019 aa26.88■■□□□ 1.89
SF1-221ENST00000633899 UBN2Q6ZU65 1347 aa26.88■■□□□ 1.89
SF1-221ENST00000633899 IBTKQ9P2D0 1353 aaPredicted RBP26.87■■□□□ 1.89
SF1-221ENST00000633899 ARFGEF2Q9Y6D5 1785 aa26.87■■□□□ 1.89
SF1-221ENST00000633899 ANKRD13DQ6ZTN6 518 aa26.87■■□□□ 1.89
SF1-221ENST00000633899 PLBD2Q8NHP8 589 aa26.87■■□□□ 1.89
SF1-221ENST00000633899 NUTM1Q86Y26 1132 aa26.86■■□□□ 1.89
SF1-221ENST00000633899 TCIRG1Q13488 830 aa26.85■■□□□ 1.89
SF1-221ENST00000633899 SUSD4Q5VX71 490 aa26.85■■□□□ 1.89
SF1-221ENST00000633899 RIC3Q7Z5B4 369 aa26.84■■□□□ 1.89
SF1-221ENST00000633899 MASTLQ96GX5 879 aa26.84■■□□□ 1.89
SF1-221ENST00000633899 ERFEQ4G0M1 354 aa26.83■■□□□ 1.89
SF1-221ENST00000633899 STYK1Q6J9G0 422 aa26.83■■□□□ 1.89
SF1-221ENST00000633899 CNKSR1Q969H4 720 aa26.83■■□□□ 1.89
SF1-221ENST00000633899 UTP14AQ9BVJ6 771 aaKnown RBP26.83■■□□□ 1.89
SF1-221ENST00000633899 PHAXQ9H814 394 aaKnown RBP26.83■■□□□ 1.89
SF1-221ENST00000633899 CACNA1FO60840 1977 aa26.83■■□□□ 1.89
SF1-221ENST00000633899 TNRC6CQ9HCJ0 1690 aaKnown RBP26.82■■□□□ 1.88
SF1-221ENST00000633899 DDX58O95786 925 aaKnown RBP26.82■■□□□ 1.88
SF1-221ENST00000633899 SRGNP10124 158 aa26.82■■□□□ 1.88
SF1-221ENST00000633899 EXOSC9Q06265 439 aaKnown RBP26.82■■□□□ 1.88
SF1-221ENST00000633899 MIER1Q8N108 512 aa26.82■■□□□ 1.88
SF1-221ENST00000633899 ABCC12Q96J65 1359 aa26.82■■□□□ 1.88
SF1-221ENST00000633899 NTSR2O95665 410 aa26.81■■□□□ 1.88
SF1-221ENST00000633899 SPINK5Q9NQ38 1064 aaPredicted RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms