RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 NPHP1O15259 732 aa15.93■□□□□ 0.14
UBR1-212ENST00000627960 LMOD3Q0VAK6 560 aa15.93■□□□□ 0.14
UBR1-212ENST00000627960 NBPF5PQ86XG9 351 aaPredicted RBP15.93■□□□□ 0.14
UBR1-212ENST00000627960 PRKRIP1Q9H875 184 aaPredicted RBP15.93■□□□□ 0.14
UBR1-212ENST00000627960 BABAM1Q9NWV8 329 aa15.93■□□□□ 0.14
UBR1-212ENST00000627960 TSPYL4Q9UJ04 414 aa15.93■□□□□ 0.14
UBR1-212ENST00000627960 WDR43Q15061 677 aaKnown RBP eCLIP15.92■□□□□ 0.14
UBR1-212ENST00000627960 HLFQ16534 295 aa15.92■□□□□ 0.14
UBR1-212ENST00000627960 CCDC146Q8IYE0 955 aa15.92■□□□□ 0.14
UBR1-212ENST00000627960 RUNDC1Q96C34 613 aa15.92■□□□□ 0.14
UBR1-212ENST00000627960 NIP7Q9Y221 180 aaKnown RBP eCLIP15.92■□□□□ 0.14
UBR1-212ENST00000627960 RRP7AQ9Y3A4 280 aaKnown RBP15.92■□□□□ 0.14
UBR1-212ENST00000627960 CACNA1SQ13698 1873 aa15.92■□□□□ 0.14
UBR1-212ENST00000627960 SRGNP10124 158 aa15.91■□□□□ 0.14
UBR1-212ENST00000627960 RASSF7Q02833 373 aa15.91■□□□□ 0.14
UBR1-212ENST00000627960 TPTE2Q6XPS3 522 aa15.91■□□□□ 0.14
UBR1-212ENST00000627960 NGEFQ8N5V2 710 aa15.91■□□□□ 0.14
UBR1-212ENST00000627960 ADAMTS8Q9UP79 889 aa15.91■□□□□ 0.14
UBR1-212ENST00000627960 SLX4Q8IY92 1834 aa15.91■□□□□ 0.14
UBR1-212ENST00000627960 FER1L6Q2WGJ9 1857 aa15.91■□□□□ 0.14
UBR1-212ENST00000627960 ARFGEF2Q9Y6D5 1785 aa15.9■□□□□ 0.14
UBR1-212ENST00000627960 ERVV-1B6SEH8 477 aa15.9■□□□□ 0.14
UBR1-212ENST00000627960 LMNB1P20700 586 aa15.9■□□□□ 0.14
UBR1-212ENST00000627960 PRELPP51888 382 aa15.9■□□□□ 0.14
UBR1-212ENST00000627960 NEUROD2Q15784 382 aa15.9■□□□□ 0.14
UBR1-212ENST00000627960 STYK1Q6J9G0 422 aa15.9■□□□□ 0.14
UBR1-212ENST00000627960 CNKSR1Q969H4 720 aa15.9■□□□□ 0.14
UBR1-212ENST00000627960 NMRK2Q9NPI5 230 aa15.9■□□□□ 0.14
UBR1-212ENST00000627960 C21orf2O43822 256 aa15.89■□□□□ 0.13
UBR1-212ENST00000627960 MYL6BP14649 208 aa15.89■□□□□ 0.13
UBR1-212ENST00000627960 TTLL7Q6ZT98 887 aa15.89■□□□□ 0.13
UBR1-212ENST00000627960 MASTLQ96GX5 879 aa15.89■□□□□ 0.13
UBR1-212ENST00000627960 ERBB4Q15303 1308 aa15.89■□□□□ 0.13
UBR1-212ENST00000627960 MAP3K15Q6ZN16 1313 aa15.89■□□□□ 0.13
UBR1-212ENST00000627960 DICER1Q9UPY3 1922 aaKnown RBP15.88■□□□□ 0.13
UBR1-212ENST00000627960 FAM177BA6PVY3 158 aa15.88■□□□□ 0.13
UBR1-212ENST00000627960 NFKBIEO00221 500 aa15.88■□□□□ 0.13
UBR1-212ENST00000627960 KIF6Q6ZMV9 814 aa15.88■□□□□ 0.13
UBR1-212ENST00000627960 ZNF219Q9P2Y4 722 aaPredicted RBP15.88■□□□□ 0.13
UBR1-212ENST00000627960 TRIM35Q9UPQ4 493 aa15.88■□□□□ 0.13
UBR1-212ENST00000627960 KDM2BQ8NHM5 1336 aa15.88■□□□□ 0.13
UBR1-212ENST00000627960 ZC3H4Q9UPT8 1303 aaKnown RBP15.88■□□□□ 0.13
UBR1-212ENST00000627960 KLRG2A4D1S0 409 aaPredicted RBP15.87■□□□□ 0.13
UBR1-212ENST00000627960 TOMM70O94826 608 aa15.87■□□□□ 0.13
UBR1-212ENST00000627960 TIAM2Q8IVF5 1701 aa15.86■□□□□ 0.13
UBR1-212ENST00000627960 CHL1O00533 1208 aa15.86■□□□□ 0.13
UBR1-212ENST00000627960 HSPA6P17066 643 aa15.86■□□□□ 0.13
UBR1-212ENST00000627960 EIF2S2P20042 333 aaKnown RBP15.86■□□□□ 0.13
UBR1-212ENST00000627960 PDIA6Q15084 440 aa15.86■□□□□ 0.13
UBR1-212ENST00000627960 PRPF40BQ6NWY9 871 aaKnown RBP15.86■□□□□ 0.13
UBR1-212ENST00000627960 TNRC6CQ9HCJ0 1690 aaKnown RBP15.86■□□□□ 0.13
UBR1-212ENST00000627960 NPR1P16066 1061 aa15.85■□□□□ 0.13
UBR1-212ENST00000627960 GTF2E1P29083 439 aaPredicted RBP15.85■□□□□ 0.13
UBR1-212ENST00000627960 ZEB1P37275 1124 aaPredicted RBP15.85■□□□□ 0.13
UBR1-212ENST00000627960 LRP10Q7Z4F1 713 aa15.85■□□□□ 0.13
UBR1-212ENST00000627960 NYXQ9GZU5 481 aa15.85■□□□□ 0.13
UBR1-212ENST00000627960 ZBTB3Q9H5J0 574 aa15.85■□□□□ 0.13
UBR1-212ENST00000627960 RRAGCQ9HB90 399 aa15.85■□□□□ 0.13
UBR1-212ENST00000627960 SOGA3Q5TF21 947 aa15.84■□□□□ 0.13
UBR1-212ENST00000627960 ZNF34Q8IZ26 560 aa15.84■□□□□ 0.13
UBR1-212ENST00000627960 LAS1LQ9Y4W2 734 aaKnown RBP15.84■□□□□ 0.13
UBR1-212ENST00000627960 LTBP3Q9NS15 1303 aa15.84■□□□□ 0.13
UBR1-212ENST00000627960 GLTPD2A6NH11 291 aa15.83■□□□□ 0.12
UBR1-212ENST00000627960 PROSER3Q2NL68 480 aa15.83■□□□□ 0.12
UBR1-212ENST00000627960 GIGYF2Q6Y7W6 1299 aaKnown RBP15.83■□□□□ 0.12
UBR1-212ENST00000627960 C16orf71Q8IYS4 520 aaPredicted RBP15.83■□□□□ 0.12
UBR1-212ENST00000627960 RBM46Q8TBY0 533 aaKnown RBP15.83■□□□□ 0.12
UBR1-212ENST00000627960 C7orf43Q8WVR3 580 aa15.83■□□□□ 0.12
UBR1-212ENST00000627960 TAOK3Q9H2K8 898 aa15.83■□□□□ 0.12
UBR1-212ENST00000627960 ANXA1P04083 346 aa15.82■□□□□ 0.12
UBR1-212ENST00000627960 GPTP24298 496 aa15.82■□□□□ 0.12
UBR1-212ENST00000627960 ERFEQ4G0M1 354 aa15.82■□□□□ 0.12
UBR1-212ENST00000627960 SUSD4Q5VX71 490 aa15.82■□□□□ 0.12
UBR1-212ENST00000627960 NUTM1Q86Y26 1132 aa15.82■□□□□ 0.12
UBR1-212ENST00000627960 NECTIN2Q92692 538 aa15.82■□□□□ 0.12
UBR1-212ENST00000627960 UBN2Q6ZU65 1347 aa15.82■□□□□ 0.12
UBR1-212ENST00000627960 IBTKQ9P2D0 1353 aaPredicted RBP15.82■□□□□ 0.12
UBR1-212ENST00000627960 ALDH1B1P30837 517 aa15.81■□□□□ 0.12
UBR1-212ENST00000627960 KRT24Q2M2I5 525 aa15.81■□□□□ 0.12
UBR1-212ENST00000627960 ABCC12Q96J65 1359 aa15.81■□□□□ 0.12
UBR1-212ENST00000627960 ANKRD36CQ5JPF3 1778 aa15.8■□□□□ 0.12
UBR1-212ENST00000627960 CEP350Q5VT06 3117 aa15.8■□□□□ 0.12
UBR1-212ENST00000627960 CRY2Q49AN0 593 aa15.8■□□□□ 0.12
UBR1-212ENST00000627960 CCDC93Q567U6 631 aa15.8■□□□□ 0.12
UBR1-212ENST00000627960 COPS6Q7L5N1 327 aa15.8■□□□□ 0.12
UBR1-212ENST00000627960 CFAP44Q96MT7 982 aa15.8■□□□□ 0.12
UBR1-212ENST00000627960 DDX21Q9NR30 783 aaKnown RBP eCLIP15.8■□□□□ 0.12
UBR1-212ENST00000627960 RIC1Q4ADV7 1423 aa15.79■□□□□ 0.12
UBR1-212ENST00000627960 APAF1O14727 1248 aa15.79■□□□□ 0.12
UBR1-212ENST00000627960 NTSR2O95665 410 aa15.79■□□□□ 0.12
UBR1-212ENST00000627960 PARP10Q53GL7 1025 aa15.79■□□□□ 0.12
UBR1-212ENST00000627960 PPP1R42Q7Z4L9 355 aa15.79■□□□□ 0.12
UBR1-212ENST00000627960 WDR90Q96KV7 1748 aa15.78■□□□□ 0.12
UBR1-212ENST00000627960 HOXB7P09629 217 aa15.78■□□□□ 0.12
UBR1-212ENST00000627960 VEGFAP15692 232 aaPredicted RBP15.78■□□□□ 0.12
UBR1-212ENST00000627960 HOXA10P31260 410 aaPredicted RBP15.78■□□□□ 0.12
UBR1-212ENST00000627960 APLP1P51693 650 aa15.78■□□□□ 0.12
UBR1-212ENST00000627960 AIMP1Q12904 312 aaKnown RBP15.78■□□□□ 0.12
UBR1-212ENST00000627960 DPY19L2Q6NUT2 758 aa15.78■□□□□ 0.12
UBR1-212ENST00000627960 XAGE3Q8WTP9 111 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms