RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 WNK3Q9BYP7 1800 aa12.66□□□□□ -0.38
SOX2-OT-244ENST00000627738 ERVV-2B6SEH9 535 aa12.65□□□□□ -0.38
SOX2-OT-244ENST00000627738 EXOC5O00471 708 aa12.65□□□□□ -0.38
SOX2-OT-244ENST00000627738 MEX3CQ5U5Q3 659 aaKnown RBP12.65□□□□□ -0.38
SOX2-OT-244ENST00000627738 CCDC30Q5VVM6 783 aa12.65□□□□□ -0.38
SOX2-OT-244ENST00000627738 ZNF790Q6PG37 636 aa12.65□□□□□ -0.38
SOX2-OT-244ENST00000627738 FNBP4Q8N3X1 1017 aaPredicted RBP12.65□□□□□ -0.38
SOX2-OT-244ENST00000627738 NECTIN2Q92692 538 aa12.65□□□□□ -0.38
SOX2-OT-244ENST00000627738 BCL9LQ86UU0 1499 aa12.65□□□□□ -0.38
SOX2-OT-244ENST00000627738 HOXB7P09629 217 aa12.64□□□□□ -0.39
SOX2-OT-244ENST00000627738 MVPQ14764 893 aaKnown RBP12.64□□□□□ -0.39
SOX2-OT-244ENST00000627738 HDGFL1Q5TGJ6 251 aa12.64□□□□□ -0.39
SOX2-OT-244ENST00000627738 TMEM57Q8N5G2 664 aa12.64□□□□□ -0.39
SOX2-OT-244ENST00000627738 STK31Q9BXU1 1019 aa12.64□□□□□ -0.39
SOX2-OT-244ENST00000627738 API5Q9BZZ5 524 aaKnown RBP12.64□□□□□ -0.39
SOX2-OT-244ENST00000627738 GIGYF1O75420 1035 aaPredicted RBP12.63□□□□□ -0.39
SOX2-OT-244ENST00000627738 EIF2S2P20042 333 aaKnown RBP12.63□□□□□ -0.39
SOX2-OT-244ENST00000627738 VPS72Q15906 364 aa12.63□□□□□ -0.39
SOX2-OT-244ENST00000627738 BARGINQ6ZT62 677 aa12.63□□□□□ -0.39
SOX2-OT-244ENST00000627738 G2E3Q7L622 706 aa12.63□□□□□ -0.39
SOX2-OT-244ENST00000627738 USP21Q9UK80 565 aa12.63□□□□□ -0.39
SOX2-OT-244ENST00000627738 HEG1Q9ULI3 1381 aa12.63□□□□□ -0.39
SOX2-OT-244ENST00000627738 TNS2Q63HR2 1409 aa12.62□□□□□ -0.39
SOX2-OT-244ENST00000627738 DDB1Q16531 1140 aa12.62□□□□□ -0.39
SOX2-OT-244ENST00000627738 ITPRIPQ8IWB1 547 aa12.62□□□□□ -0.39
SOX2-OT-244ENST00000627738 TTC5Q8N0Z6 440 aa12.62□□□□□ -0.39
SOX2-OT-244ENST00000627738 ABCC4O15439 1325 aa12.62□□□□□ -0.39
SOX2-OT-244ENST00000627738 PTPRCP08575 1304 aa12.62□□□□□ -0.39
SOX2-OT-244ENST00000627738 PRAMEF22A3QJZ6 481 aa12.61□□□□□ -0.39
SOX2-OT-244ENST00000627738 FAM205CA6NFA0 338 aa12.61□□□□□ -0.39
SOX2-OT-244ENST00000627738 SPNS2Q8IVW8 549 aa12.61□□□□□ -0.39
SOX2-OT-244ENST00000627738 CHMP4AQ9BY43 222 aa12.61□□□□□ -0.39
SOX2-OT-244ENST00000627738 DDX19BQ9UMR2 479 aa12.61□□□□□ -0.39
SOX2-OT-244ENST00000627738 TOGARAM1Q9Y4F4 1720 aa12.61□□□□□ -0.39
SOX2-OT-244ENST00000627738 PDE4AP27815 886 aa12.6□□□□□ -0.39
SOX2-OT-244ENST00000627738 AAMPQ13685 434 aa12.6□□□□□ -0.39
SOX2-OT-244ENST00000627738 ZNF496Q96IT1 587 aaPredicted RBP12.6□□□□□ -0.39
SOX2-OT-244ENST00000627738 LARP6Q9BRS8 491 aaKnown RBP12.6□□□□□ -0.39
SOX2-OT-244ENST00000627738 TMOD3Q9NYL9 352 aa12.6□□□□□ -0.39
SOX2-OT-244ENST00000627738 RGS12O14924 1447 aa12.6□□□□□ -0.39
SOX2-OT-244ENST00000627738 FLIIQ13045 1269 aa12.59□□□□□ -0.39
SOX2-OT-244ENST00000627738 MMRN1Q13201 1228 aa12.59□□□□□ -0.39
SOX2-OT-244ENST00000627738 FAM98CQ17RN3 349 aaKnown RBP12.59□□□□□ -0.39
SOX2-OT-244ENST00000627738 FMNL2Q96PY5 1086 aa12.59□□□□□ -0.39
SOX2-OT-244ENST00000627738 CHPF2Q9P2E5 772 aa12.59□□□□□ -0.39
SOX2-OT-244ENST00000627738 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.59□□□□□ -0.39
SOX2-OT-244ENST00000627738 AFF2P51816 1311 aa12.59□□□□□ -0.39
SOX2-OT-244ENST00000627738 SNRPA1P09661 255 aaKnown RBP12.58□□□□□ -0.4
SOX2-OT-244ENST00000627738 F6X3S4 739 aa12.57□□□□□ -0.4
SOX2-OT-244ENST00000627738 ANXA1P04083 346 aa12.57□□□□□ -0.4
SOX2-OT-244ENST00000627738 FKBP5Q13451 457 aaPredicted RBP12.57□□□□□ -0.4
SOX2-OT-244ENST00000627738 MARCH10Q8NA82 808 aaPredicted RBP12.57□□□□□ -0.4
SOX2-OT-244ENST00000627738 PIGBQ92521 554 aa12.57□□□□□ -0.4
SOX2-OT-244ENST00000627738 HS3ST6Q96QI5 342 aa12.57□□□□□ -0.4
SOX2-OT-244ENST00000627738 PHAXQ9H814 394 aaKnown RBP12.57□□□□□ -0.4
SOX2-OT-244ENST00000627738 DBF4Q9UBU7 674 aaPredicted RBP12.57□□□□□ -0.4
SOX2-OT-244ENST00000627738 PAPPAQ13219 1627 aa12.57□□□□□ -0.4
SOX2-OT-244ENST00000627738 CACNA1FO60840 1977 aa12.57□□□□□ -0.4
SOX2-OT-244ENST00000627738 C5P01031 1676 aa12.57□□□□□ -0.4
SOX2-OT-244ENST00000627738 POTEB3A0JP26 581 aa12.56□□□□□ -0.4
SOX2-OT-244ENST00000627738 ZBTB7BO15156 539 aaPredicted RBP12.56□□□□□ -0.4
SOX2-OT-244ENST00000627738 PROSER3Q2NL68 480 aa12.56□□□□□ -0.4
SOX2-OT-244ENST00000627738 INTS3Q68E01 1043 aaKnown RBP12.56□□□□□ -0.4
SOX2-OT-244ENST00000627738 POTEBQ6S5H4 581 aa12.56□□□□□ -0.4
SOX2-OT-244ENST00000627738 KCNV2Q8TDN2 545 aa12.56□□□□□ -0.4
SOX2-OT-244ENST00000627738 PCDHB15Q9Y5E8 787 aa12.56□□□□□ -0.4
SOX2-OT-244ENST00000627738 USP16Q9Y5T5 823 aa12.56□□□□□ -0.4
SOX2-OT-244ENST00000627738 KCPQ6ZWJ8 1503 aa12.56□□□□□ -0.4
SOX2-OT-244ENST00000627738 GLI3P10071 1580 aa12.56□□□□□ -0.4
SOX2-OT-244ENST00000627738 ITGB4P16144 1822 aa12.55□□□□□ -0.4
SOX2-OT-244ENST00000627738 A0A0G2JS52 829 aa12.55□□□□□ -0.4
SOX2-OT-244ENST00000627738 MYT1Q01538 1121 aa12.55□□□□□ -0.4
SOX2-OT-244ENST00000627738 SLC4A10Q6U841 1118 aa12.55□□□□□ -0.4
SOX2-OT-244ENST00000627738 SYTL4Q96C24 671 aaPredicted RBP12.55□□□□□ -0.4
SOX2-OT-244ENST00000627738 GJD4Q96KN9 370 aaPredicted RBP12.55□□□□□ -0.4
SOX2-OT-244ENST00000627738 CHMP4BQ9H444 224 aaKnown RBP12.55□□□□□ -0.4
SOX2-OT-244ENST00000627738 ZBTB40Q9NUA8 1239 aa12.55□□□□□ -0.4
SOX2-OT-244ENST00000627738 UBR2Q8IWV8 1755 aa12.55□□□□□ -0.4
SOX2-OT-244ENST00000627738 KDM2BQ8NHM5 1336 aa12.55□□□□□ -0.4
SOX2-OT-244ENST00000627738 BCL9O00512 1426 aa12.54□□□□□ -0.4
SOX2-OT-244ENST00000627738 DOT1LQ8TEK3 1739 aa12.54□□□□□ -0.4
SOX2-OT-244ENST00000627738 PTCD1O75127 700 aaKnown RBP12.54□□□□□ -0.4
SOX2-OT-244ENST00000627738 PRIM1P49642 420 aaKnown RBP12.54□□□□□ -0.4
SOX2-OT-244ENST00000627738 PDIA6Q15084 440 aa12.54□□□□□ -0.4
SOX2-OT-244ENST00000627738 CENPQQ7L2Z9 268 aaPredicted RBP12.54□□□□□ -0.4
SOX2-OT-244ENST00000627738 DDX21Q9NR30 783 aaKnown RBP eCLIP12.54□□□□□ -0.4
SOX2-OT-244ENST00000627738 ATG3Q9NT62 314 aa12.54□□□□□ -0.4
SOX2-OT-244ENST00000627738 TRPC5Q9UL62 973 aaPredicted RBP12.54□□□□□ -0.4
SOX2-OT-244ENST00000627738 ASAP1Q9ULH1 1129 aa12.54□□□□□ -0.4
SOX2-OT-244ENST00000627738 ATRNO75882 1429 aa12.54□□□□□ -0.4
SOX2-OT-244ENST00000627738 IGHDP01880 384 aa12.53□□□□□ -0.4
SOX2-OT-244ENST00000627738 PRKCSHP14314 528 aaPredicted RBP12.53□□□□□ -0.4
SOX2-OT-244ENST00000627738 HOXB3P14651 431 aaPredicted RBP12.53□□□□□ -0.4
SOX2-OT-244ENST00000627738 CCT4P50991 539 aaKnown RBP12.53□□□□□ -0.4
SOX2-OT-244ENST00000627738 E2F4Q16254 413 aa12.53□□□□□ -0.4
SOX2-OT-244ENST00000627738 ZNF710Q8N1W2 664 aa12.53□□□□□ -0.4
SOX2-OT-244ENST00000627738 ACSBG1Q96GR2 724 aa12.53□□□□□ -0.4
SOX2-OT-244ENST00000627738 HYPKQ9NX55 129 aa12.53□□□□□ -0.4
SOX2-OT-244ENST00000627738 THSD7AQ9UPZ6 1657 aa12.52□□□□□ -0.4
SOX2-OT-244ENST00000627738 LAMB4A4D0S4 1761 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms