RNA–Protein interactions for RNA: ENST00000627200.1

CHD2-210, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-210ENST00000627200 NEFMP07197 916 aa12.46□□□□□ -0.41
CHD2-210ENST00000627200 LMNB1P20700 586 aa12.46□□□□□ -0.41
CHD2-210ENST00000627200 PDE6BP35913 854 aa12.46□□□□□ -0.41
CHD2-210ENST00000627200 ST5P78524 1137 aa12.46□□□□□ -0.41
CHD2-210ENST00000627200 FER1L6Q2WGJ9 1857 aa12.46□□□□□ -0.42
CHD2-210ENST00000627200 KDM2BQ8NHM5 1336 aa12.45□□□□□ -0.42
CHD2-210ENST00000627200 EIF4A1P60842 406 aaKnown RBP12.45□□□□□ -0.42
CHD2-210ENST00000627200 DDX10Q13206 875 aaKnown RBP12.45□□□□□ -0.42
CHD2-210ENST00000627200 HLFQ16534 295 aa12.45□□□□□ -0.42
CHD2-210ENST00000627200 NBPF5PQ86XG9 351 aaPredicted RBP12.45□□□□□ -0.42
CHD2-210ENST00000627200 NGEFQ8N5V2 710 aa12.45□□□□□ -0.42
CHD2-210ENST00000627200 RRAGCQ9HB90 399 aa12.45□□□□□ -0.42
CHD2-210ENST00000627200 NIP7Q9Y221 180 aaKnown RBP eCLIP12.45□□□□□ -0.42
CHD2-210ENST00000627200 SRGNP10124 158 aa12.44□□□□□ -0.42
CHD2-210ENST00000627200 PRPF40BQ6NWY9 871 aaKnown RBP12.44□□□□□ -0.42
CHD2-210ENST00000627200 ZNF652Q9Y2D9 606 aa12.44□□□□□ -0.42
CHD2-210ENST00000627200 WDR90Q96KV7 1748 aa12.44□□□□□ -0.42
CHD2-210ENST00000627200 ABCC12Q96J65 1359 aa12.43□□□□□ -0.42
CHD2-210ENST00000627200 MYL6BP14649 208 aa12.43□□□□□ -0.42
CHD2-210ENST00000627200 HTRA3P83110 453 aa12.43□□□□□ -0.42
CHD2-210ENST00000627200 STYK1Q6J9G0 422 aa12.43□□□□□ -0.42
CHD2-210ENST00000627200 CLEC4GQ6UXB4 293 aa12.43□□□□□ -0.42
CHD2-210ENST00000627200 TTLL7Q6ZT98 887 aa12.43□□□□□ -0.42
CHD2-210ENST00000627200 C16orf71Q8IYS4 520 aaPredicted RBP12.43□□□□□ -0.42
CHD2-210ENST00000627200 PNISRQ8TF01 805 aaKnown RBP12.43□□□□□ -0.42
CHD2-210ENST00000627200 RRP7AQ9Y3A4 280 aaKnown RBP12.43□□□□□ -0.42
CHD2-210ENST00000627200 ZC3H4Q9UPT8 1303 aaKnown RBP12.42□□□□□ -0.42
CHD2-210ENST00000627200 NUP98P52948 1817 aa12.42□□□□□ -0.42
CHD2-210ENST00000627200 RALBP1Q15311 655 aa12.42□□□□□ -0.42
CHD2-210ENST00000627200 OLFM4Q6UX06 510 aa12.42□□□□□ -0.42
CHD2-210ENST00000627200 CCDC146Q8IYE0 955 aa12.42□□□□□ -0.42
CHD2-210ENST00000627200 RBM46Q8TBY0 533 aaKnown RBP12.42□□□□□ -0.42
CHD2-210ENST00000627200 MASTLQ96GX5 879 aa12.42□□□□□ -0.42
CHD2-210ENST00000627200 PDZRN3Q9UPQ7 1066 aa12.42□□□□□ -0.42
CHD2-210ENST00000627200 DICER1Q9UPY3 1922 aaKnown RBP12.41□□□□□ -0.42
CHD2-210ENST00000627200 GLTPD2A6NH11 291 aa12.41□□□□□ -0.42
CHD2-210ENST00000627200 APLP1P51693 650 aa12.41□□□□□ -0.42
CHD2-210ENST00000627200 RIPK4P57078 832 aa12.41□□□□□ -0.42
CHD2-210ENST00000627200 NUTM1Q86Y26 1132 aa12.41□□□□□ -0.42
CHD2-210ENST00000627200 CNKSR1Q969H4 720 aa12.41□□□□□ -0.42
CHD2-210ENST00000627200 TAOK3Q9H2K8 898 aa12.41□□□□□ -0.42
CHD2-210ENST00000627200 ZBTB3Q9H5J0 574 aa12.41□□□□□ -0.42
CHD2-210ENST00000627200 TSPYL4Q9UJ04 414 aa12.41□□□□□ -0.42
CHD2-210ENST00000627200 MAP3K15Q6ZN16 1313 aa12.4□□□□□ -0.42
CHD2-210ENST00000627200 UBN2Q6ZU65 1347 aa12.4□□□□□ -0.42
CHD2-210ENST00000627200 MYBBP1AQ9BQG0 1328 aaKnown RBP12.4□□□□□ -0.42
CHD2-210ENST00000627200 GPTP24298 496 aa12.4□□□□□ -0.42
CHD2-210ENST00000627200 TMPOP42166 694 aaKnown RBP12.4□□□□□ -0.42
CHD2-210ENST00000627200 ERFEQ4G0M1 354 aa12.4□□□□□ -0.42
CHD2-210ENST00000627200 SLC51AQ86UW1 340 aa12.4□□□□□ -0.42
CHD2-210ENST00000627200 LTBP3Q9NS15 1303 aa12.39□□□□□ -0.43
CHD2-210ENST00000627200 ANXA1P04083 346 aa12.39□□□□□ -0.43
CHD2-210ENST00000627200 NPR1P16066 1061 aa12.39□□□□□ -0.43
CHD2-210ENST00000627200 NEUROD2Q15784 382 aa12.39□□□□□ -0.43
CHD2-210ENST00000627200 PROSER3Q2NL68 480 aa12.39□□□□□ -0.43
CHD2-210ENST00000627200 TPTE2Q6XPS3 522 aa12.39□□□□□ -0.43
CHD2-210ENST00000627200 KIF6Q6ZMV9 814 aa12.39□□□□□ -0.43
CHD2-210ENST00000627200 C7orf43Q8WVR3 580 aa12.39□□□□□ -0.43
CHD2-210ENST00000627200 PNNQ9H307 717 aaKnown RBP12.39□□□□□ -0.43
CHD2-210ENST00000627200 KLRG2A4D1S0 409 aaPredicted RBP12.38□□□□□ -0.43
CHD2-210ENST00000627200 POTECB2RU33 542 aa12.38□□□□□ -0.43
CHD2-210ENST00000627200 RGL2O15211 777 aa12.38□□□□□ -0.43
CHD2-210ENST00000627200 EIF2S2P20042 333 aaKnown RBP12.38□□□□□ -0.43
CHD2-210ENST00000627200 KRT24Q2M2I5 525 aa12.38□□□□□ -0.43
CHD2-210ENST00000627200 LRP10Q7Z4F1 713 aa12.38□□□□□ -0.43
CHD2-210ENST00000627200 DNAJC5GQ8N7S2 189 aa12.38□□□□□ -0.43
CHD2-210ENST00000627200 ERVV-1B6SEH8 477 aa12.37□□□□□ -0.43
CHD2-210ENST00000627200 VEGFAP15692 232 aaPredicted RBP12.37□□□□□ -0.43
CHD2-210ENST00000627200 GTF2E1P29083 439 aaPredicted RBP12.37□□□□□ -0.43
CHD2-210ENST00000627200 FSTL1Q12841 308 aa12.37□□□□□ -0.43
CHD2-210ENST00000627200 PDIA6Q15084 440 aa12.37□□□□□ -0.43
CHD2-210ENST00000627200 CCDC93Q567U6 631 aa12.37□□□□□ -0.43
CHD2-210ENST00000627200 NECTIN2Q92692 538 aa12.37□□□□□ -0.43
CHD2-210ENST00000627200 SNED1Q8TER0 1413 aa12.37□□□□□ -0.43
CHD2-210ENST00000627200 DDNO94850 711 aaPredicted RBP12.36□□□□□ -0.43
CHD2-210ENST00000627200 SUSD4Q5VX71 490 aa12.36□□□□□ -0.43
CHD2-210ENST00000627200 C3orf67Q6ZVT6 689 aa12.36□□□□□ -0.43
CHD2-210ENST00000627200 SMC1BQ8NDV3 1235 aa12.36□□□□□ -0.43
CHD2-210ENST00000627200 ZNF277Q9NRM2 450 aaPredicted RBP12.36□□□□□ -0.43
CHD2-210ENST00000627200 ERBB4Q15303 1308 aa12.36□□□□□ -0.43
CHD2-210ENST00000627200 ZNF541Q9H0D2 1346 aa12.36□□□□□ -0.43
CHD2-210ENST00000627200 COL4A5P29400 1685 aa12.35□□□□□ -0.43
CHD2-210ENST00000627200 IBTKQ9P2D0 1353 aaPredicted RBP12.35□□□□□ -0.43
CHD2-210ENST00000627200 NTSR2O95665 410 aa12.35□□□□□ -0.43
CHD2-210ENST00000627200 POTEIP0CG38 1075 aa12.35□□□□□ -0.43
CHD2-210ENST00000627200 POTEJP0CG39 1038 aa12.35□□□□□ -0.43
CHD2-210ENST00000627200 CRY2Q49AN0 593 aa12.35□□□□□ -0.43
CHD2-210ENST00000627200 SOGA3Q5TF21 947 aa12.35□□□□□ -0.43
CHD2-210ENST00000627200 ZNF34Q8IZ26 560 aa12.35□□□□□ -0.43
CHD2-210ENST00000627200 ADAMTS8Q9UP79 889 aa12.35□□□□□ -0.43
CHD2-210ENST00000627200 TRIM35Q9UPQ4 493 aa12.35□□□□□ -0.43
CHD2-210ENST00000627200 ANKRD36CQ5JPF3 1778 aa12.35□□□□□ -0.43
CHD2-210ENST00000627200 FKBP4Q02790 459 aaKnown RBP eCLIP12.34□□□□□ -0.43
CHD2-210ENST00000627200 LMOD3Q0VAK6 560 aa12.34□□□□□ -0.43
CHD2-210ENST00000627200 WDR43Q15061 677 aaKnown RBP eCLIP12.34□□□□□ -0.43
CHD2-210ENST00000627200 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
CHD2-210ENST00000627200 GIGYF2Q6Y7W6 1299 aaKnown RBP12.34□□□□□ -0.43
CHD2-210ENST00000627200 ZNF428Q96B54 188 aa12.34□□□□□ -0.43
CHD2-210ENST00000627200 RUNDC1Q96C34 613 aa12.34□□□□□ -0.43
CHD2-210ENST00000627200 NYXQ9GZU5 481 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms