RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 A6NJY4 79 aa7.69□□□□□ -1.18
VBP1-204ENST00000625964 FAM229AH3BQW9 127 aa7.69□□□□□ -1.18
VBP1-204ENST00000625964 MAP7D1Q3KQU3 841 aa7.69□□□□□ -1.18
VBP1-204ENST00000625964 IQSEC3Q9UPP2 1182 aaPredicted RBP7.69□□□□□ -1.18
VBP1-204ENST00000625964 NID1P14543 1247 aa7.68□□□□□ -1.18
VBP1-204ENST00000625964 NRG1Q02297 640 aaPredicted RBP7.68□□□□□ -1.18
VBP1-204ENST00000625964 NEUROD1Q13562 356 aa7.68□□□□□ -1.18
VBP1-204ENST00000625964 GRIK4Q16099 956 aa7.68□□□□□ -1.18
VBP1-204ENST00000625964 CABP1Q9NZU7 370 aa7.68□□□□□ -1.18
VBP1-204ENST00000625964 STARD13Q9Y3M8 1113 aa7.68□□□□□ -1.18
VBP1-204ENST00000625964 GPC6Q9Y625 555 aaPredicted RBP7.68□□□□□ -1.18
VBP1-204ENST00000625964 ALBP02768 609 aa7.67□□□□□ -1.18
VBP1-204ENST00000625964 TXNRD3Q86VQ6 643 aa7.67□□□□□ -1.18
VBP1-204ENST00000625964 ELNP15502 786 aa7.66□□□□□ -1.18
VBP1-204ENST00000625964 MBTPS1Q14703 1052 aa7.66□□□□□ -1.18
VBP1-204ENST00000625964 PRM3Q9NNZ6 103 aa7.66□□□□□ -1.18
VBP1-204ENST00000625964 SERTAD1Q9UHV2 236 aa7.66□□□□□ -1.18
VBP1-204ENST00000625964 TRAPPC3LQ5T215 181 aa7.65□□□□□ -1.18
VBP1-204ENST00000625964 LENG1Q96BZ8 264 aaPredicted RBP7.65□□□□□ -1.18
VBP1-204ENST00000625964 NEUROD4Q9HD90 331 aa7.65□□□□□ -1.18
VBP1-204ENST00000625964 TMEM229AB2RXF0 380 aa7.64□□□□□ -1.19
VBP1-204ENST00000625964 C20orf204Q6ZNR8 217 aa7.64□□□□□ -1.19
VBP1-204ENST00000625964 BACH1O14867 736 aa7.63□□□□□ -1.19
VBP1-204ENST00000625964 ADH7P40394 386 aa7.63□□□□□ -1.19
VBP1-204ENST00000625964 NEUROD2Q15784 382 aa7.63□□□□□ -1.19
VBP1-204ENST00000625964 LILRB5O75023 590 aa7.62□□□□□ -1.19
VBP1-204ENST00000625964 COBLO75128 1261 aa7.62□□□□□ -1.19
VBP1-204ENST00000625964 SELPP16109 830 aa7.62□□□□□ -1.19
VBP1-204ENST00000625964 RAC1P63000 192 aa7.62□□□□□ -1.19
VBP1-204ENST00000625964 C8orf86Q6ZUL3 223 aa7.62□□□□□ -1.19
VBP1-204ENST00000625964 TXLNAP40222 546 aa7.62□□□□□ -1.19
VBP1-204ENST00000625964 LRRC69Q6ZNQ3 347 aa7.62□□□□□ -1.19
VBP1-204ENST00000625964 TP53INP1Q96A56 240 aa7.62□□□□□ -1.19
VBP1-204ENST00000625964 SLC30A3Q99726 388 aa7.62□□□□□ -1.19
VBP1-204ENST00000625964 SNRKQ9NRH2 765 aa7.62□□□□□ -1.19
VBP1-204ENST00000625964 USP3Q9Y6I4 520 aa7.62□□□□□ -1.19
VBP1-204ENST00000625964 A0A0A0MRY4 1105 aa7.61□□□□□ -1.19
VBP1-204ENST00000625964 EML1O00423 815 aa7.61□□□□□ -1.19
VBP1-204ENST00000625964 SPEM2Q0P670 501 aa7.61□□□□□ -1.19
VBP1-204ENST00000625964 SFSWAPQ12872 951 aaKnown RBP7.61□□□□□ -1.19
VBP1-204ENST00000625964 TEAD4Q15561 434 aa7.61□□□□□ -1.19
VBP1-204ENST00000625964 MCTP1Q6DN14 999 aa7.61□□□□□ -1.19
VBP1-204ENST00000625964 PLPP7Q8NBV4 271 aa7.61□□□□□ -1.19
VBP1-204ENST00000625964 RNF112Q9ULX5 631 aa7.61□□□□□ -1.19
VBP1-204ENST00000625964 L3MBTL2Q969R5 705 aa7.6□□□□□ -1.19
VBP1-204ENST00000625964 SSBP4Q9BWG4 385 aaPredicted RBP7.6□□□□□ -1.19
VBP1-204ENST00000625964 KRTAP4-9Q9BYQ8 210 aa7.6□□□□□ -1.19
VBP1-204ENST00000625964 SCHIP1Q9P0W5 487 aaPredicted RBP7.6□□□□□ -1.19
VBP1-204ENST00000625964 KRTAP4-2Q9BYR5 136 aa7.59□□□□□ -1.19
VBP1-204ENST00000625964 PARP3Q9Y6F1 533 aa7.59□□□□□ -1.19
VBP1-204ENST00000625964 PAX4O43316 350 aa7.58□□□□□ -1.2
VBP1-204ENST00000625964 NOS2P35228 1153 aa7.58□□□□□ -1.2
VBP1-204ENST00000625964 TXKP42681 527 aa7.58□□□□□ -1.2
VBP1-204ENST00000625964 BRPF1P55201 1214 aaPredicted RBP7.58□□□□□ -1.2
VBP1-204ENST00000625964 KCNQ4P56696 695 aa7.58□□□□□ -1.2
VBP1-204ENST00000625964 IL27Q8NEV9 243 aa7.57□□□□□ -1.2
VBP1-204ENST00000625964 ZDHHC1Q8WTX9 485 aa7.57□□□□□ -1.2
VBP1-204ENST00000625964 C7orf43Q8WVR3 580 aa7.57□□□□□ -1.2
VBP1-204ENST00000625964 EFCC1Q9HA90 598 aa7.57□□□□□ -1.2
VBP1-204ENST00000625964 TBC1D2BQ9UPU7 963 aa7.57□□□□□ -1.2
VBP1-204ENST00000625964 PCDHGA11Q9Y5H2 935 aa7.57□□□□□ -1.2
VBP1-204ENST00000625964 COL17A1Q9UMD9 1497 aaPredicted RBP7.57□□□□□ -1.2
VBP1-204ENST00000625964 SLC51AQ86UW1 340 aa7.57□□□□□ -1.2
VBP1-204ENST00000625964 ANKIB1Q9P2G1 1089 aa7.57□□□□□ -1.2
VBP1-204ENST00000625964 IRF5Q13568 498 aa7.56□□□□□ -1.2
VBP1-204ENST00000625964 USP21Q9UK80 565 aa7.56□□□□□ -1.2
VBP1-204ENST00000625964 KCNH4Q9UQ05 1017 aa7.56□□□□□ -1.2
VBP1-204ENST00000625964 LZTS3O60299 673 aaPredicted RBP7.55□□□□□ -1.2
VBP1-204ENST00000625964 SOX11P35716 441 aa7.55□□□□□ -1.2
VBP1-204ENST00000625964 BRD7Q9NPI1 651 aa7.55□□□□□ -1.2
VBP1-204ENST00000625964 C1orf53Q5VUE5 145 aa7.54□□□□□ -1.2
VBP1-204ENST00000625964 SHISA2Q6UWI4 295 aa7.54□□□□□ -1.2
VBP1-204ENST00000625964 ILDR2Q71H61 639 aa7.54□□□□□ -1.2
VBP1-204ENST00000625964 FMR1NBQ8N0W7 255 aaPredicted RBP7.54□□□□□ -1.2
VBP1-204ENST00000625964 RHPN1Q8TCX5 695 aa7.54□□□□□ -1.2
VBP1-204ENST00000625964 ZNF232Q9UNY5 417 aa7.54□□□□□ -1.2
VBP1-204ENST00000625964 YBX3P16989 372 aaKnown RBP eCLIP7.53□□□□□ -1.24e-7■□□□□ 10.1
VBP1-204ENST00000625964 WASHC4Q2M389 1173 aa7.53□□□□□ -1.2
VBP1-204ENST00000625964 JPH1Q9HDC5 661 aaPredicted RBP7.53□□□□□ -1.2
VBP1-204ENST00000625964 SERTM1A2A2V5 107 aa7.52□□□□□ -1.2
VBP1-204ENST00000625964 SEMA3FQ13275 785 aa7.52□□□□□ -1.2
VBP1-204ENST00000625964 EML3Q32P44 896 aa7.52□□□□□ -1.2
VBP1-204ENST00000625964 DTWD1Q8N5C7 304 aa7.52□□□□□ -1.2
VBP1-204ENST00000625964 CEP63Q96MT8 703 aa7.52□□□□□ -1.2
VBP1-204ENST00000625964 FMNL2Q96PY5 1086 aa7.52□□□□□ -1.2
VBP1-204ENST00000625964 ZNF358Q9NW07 568 aa7.52□□□□□ -1.2
VBP1-204ENST00000625964 NOD1Q9Y239 953 aa7.52□□□□□ -1.2
VBP1-204ENST00000625964 VAC14Q08AM6 782 aa7.52□□□□□ -1.21
VBP1-204ENST00000625964 RAB44Q7Z6P3 723 aaPredicted RBP7.52□□□□□ -1.21
VBP1-204ENST00000625964 SLC9A9Q8IVB4 645 aa7.52□□□□□ -1.21
VBP1-204ENST00000625964 KRTAP17-1Q9BYP8 105 aa7.52□□□□□ -1.21
VBP1-204ENST00000625964 UBE2OQ9C0C9 1292 aaKnown RBP7.52□□□□□ -1.21
VBP1-204ENST00000625964 SLC6A14Q9UN76 642 aa7.52□□□□□ -1.21
VBP1-204ENST00000625964 EPHA4P54764 986 aa7.51□□□□□ -1.21
VBP1-204ENST00000625964 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.51□□□□□ -1.21
VBP1-204ENST00000625964 PCMTD2Q9NV79 361 aa7.51□□□□□ -1.21
VBP1-204ENST00000625964 AFF1P51825 1210 aaKnown RBP7.5□□□□□ -1.21
VBP1-204ENST00000625964 WFDC12Q8WWY7 111 aa7.5□□□□□ -1.21
VBP1-204ENST00000625964 BHMTQ93088 406 aa7.5□□□□□ -1.21
VBP1-204ENST00000625964 HIRAP54198 1017 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms