RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 STIM1Q13586 685 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 TAF7Q15545 349 aaPredicted RBP6.58□□□□□ -1.36
ERCC6-213ENST00000624341 PIBF1Q8WXW3 757 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 CTNNA3Q9UI47 895 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 KRT18P05783 430 aaKnown RBP6.58□□□□□ -1.36
ERCC6-213ENST00000624341 PRIM1P49642 420 aaKnown RBP6.58□□□□□ -1.36
ERCC6-213ENST00000624341 CCDC57Q2TAC2 916 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 KIF4BQ2VIQ3 1234 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 TTC22Q5TAA0 569 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 NACAP1Q9BZK3 213 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 ZHX3Q9H4I2 956 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 TTC12Q9H892 705 aaPredicted RBP6.58□□□□□ -1.36
ERCC6-213ENST00000624341 SPINK5Q9NQ38 1064 aaPredicted RBP6.58□□□□□ -1.36
ERCC6-213ENST00000624341 CTDP1Q9Y5B0 961 aaPredicted RBP6.58□□□□□ -1.36
ERCC6-213ENST00000624341 ABCC5O15440 1437 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 ABCC11Q96J66 1382 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 ZSCAN12O43309 604 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 CDKL5O76039 1030 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 TOP1P11387 765 aaKnown RBP6.58□□□□□ -1.36
ERCC6-213ENST00000624341 NUCB1Q02818 461 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 NOLC1Q14978 699 aaKnown RBP eCLIP6.58□□□□□ -1.36
ERCC6-213ENST00000624341 WAPLQ7Z5K2 1190 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 MYO6Q9UM54 1294 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 RPRD2Q5VT52 1461 aaKnown RBP6.58□□□□□ -1.36
ERCC6-213ENST00000624341 LTBP4Q8N2S1 1624 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 DUOX2Q9NRD8 1548 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 SDSP20132 328 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 EIF5P55010 431 aaKnown RBP6.57□□□□□ -1.36
ERCC6-213ENST00000624341 CCT2P78371 535 aaKnown RBP6.57□□□□□ -1.36
ERCC6-213ENST00000624341 IKQ13123 557 aaPredicted RBP6.57□□□□□ -1.36
ERCC6-213ENST00000624341 HDAC1Q13547 482 aaPredicted RBP6.57□□□□□ -1.36
ERCC6-213ENST00000624341 NME9Q86XW9 330 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 CPLX3Q8WVH0 158 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 PRIMPOLQ96LW4 560 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 CRACR2AQ9BSW2 395 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 SLC52A1Q9NWF4 448 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 CCDC61Q9Y6R9 512 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 ADGRF5Q8IZF2 1346 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 GNAT3A8MTJ3 354 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 IDH1O75874 414 aaKnown RBP6.57□□□□□ -1.36
ERCC6-213ENST00000624341 UBE2HP62256 183 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 KIAA1328Q86T90 577 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 FSIP1Q8NA03 581 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 SLC26A8Q96RN1 970 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 DDX19AQ9NUU7 478 aaKnown RBP6.57□□□□□ -1.36
ERCC6-213ENST00000624341 FAM83GA6ND36 823 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 TATP17735 454 aaPredicted RBP6.57□□□□□ -1.36
ERCC6-213ENST00000624341 IBSPP21815 317 aaPredicted RBP6.57□□□□□ -1.36
ERCC6-213ENST00000624341 KIF6Q6ZMV9 814 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 TMC6Q7Z403 805 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 TAX1BP1Q86VP1 789 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 CCDC82Q8N4S0 544 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 NUDT16Q96DE0 195 aaKnown RBP6.57□□□□□ -1.36
ERCC6-213ENST00000624341 RRAGDQ9NQL2 400 aaPredicted RBP6.57□□□□□ -1.36
ERCC6-213ENST00000624341 ZKSCAN5Q9Y2L8 839 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 PLEKHH1Q9ULM0 1364 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 RLBP1P12271 317 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 ISM2Q6H9L7 571 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 C8orf76Q96K31 380 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 CALCOCO1Q9P1Z2 691 aa6.57□□□□□ -1.36
ERCC6-213ENST00000624341 NOL7Q9UMY1 257 aaKnown RBP6.57□□□□□ -1.36
ERCC6-213ENST00000624341 CALRP27797 417 aaKnown RBP6.56□□□□□ -1.36
ERCC6-213ENST00000624341 CASQ1P31415 396 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 CABP4P57796 275 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 IMMTQ16891 758 aaKnown RBP6.56□□□□□ -1.36
ERCC6-213ENST00000624341 UVSSAQ2YD98 709 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 THEMISQ8N1K5 641 aaPredicted RBP6.56□□□□□ -1.36
ERCC6-213ENST00000624341 LUC7LQ9NQ29 371 aaKnown RBP6.56□□□□□ -1.36
ERCC6-213ENST00000624341 U3KPZ7 1027 aaPredicted RBP6.56□□□□□ -1.36
ERCC6-213ENST00000624341 DEPDC5O75140 1603 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 ATF3P18847 181 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 FBLN1P23142 703 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 TDO2P48775 406 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 MEX3CQ5U5Q3 659 aaKnown RBP6.56□□□□□ -1.36
ERCC6-213ENST00000624341 JAKMIP3Q5VZ66 844 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 UBAC1Q9BSL1 405 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 CNPY2Q9Y2B0 182 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 KIF5CO60282 957 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 IGSF3O75054 1194 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 ERLIN2O94905 339 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 SSBP05455 408 aaKnown RBP eCLIP6.56□□□□□ -1.36
ERCC6-213ENST00000624341 SLC3A2P08195 630 aaKnown RBP6.56□□□□□ -1.36
ERCC6-213ENST00000624341 CCDC186Q7Z3E2 898 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 USP48Q86UV5 1035 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 C16orf71Q8IYS4 520 aaPredicted RBP6.56□□□□□ -1.36
ERCC6-213ENST00000624341 NECAB1Q8N987 351 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 ZSWIM4Q9H7M6 989 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 MBIPQ9NS73 344 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 UNC13BO14795 1591 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 SPATA31D1Q6ZQQ2 1576 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 CEP135Q66GS9 1140 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 KLHL34Q8N239 644 aa6.56□□□□□ -1.36
ERCC6-213ENST00000624341 TCEANC2Q96MN5 208 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 GBP3Q9H0R5 595 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 RPGRIP1LQ68CZ1 1315 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 CTAGE5O15320 804 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 NEMFO60524 1076 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 USP8P40818 1118 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 FLIIQ13045 1269 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 SNW1Q13573 536 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms