RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 PROSER3Q2NL68 480 aa18.09■□□□□ 0.49
PCDHGC3-208ENST00000622836 TTLL7Q6ZT98 887 aa18.09■□□□□ 0.49
PCDHGC3-208ENST00000622836 TSR2Q969E8 191 aaKnown RBP18.09■□□□□ 0.49
PCDHGC3-208ENST00000622836 ZBTB3Q9H5J0 574 aa18.09■□□□□ 0.49
PCDHGC3-208ENST00000622836 NIP7Q9Y221 180 aaKnown RBP eCLIP18.09■□□□□ 0.49
PCDHGC3-208ENST00000622836 KIF13BQ9NQT8 1826 aa18.09■□□□□ 0.49
PCDHGC3-208ENST00000622836 ERVV-1B6SEH8 477 aa18.08■□□□□ 0.48
PCDHGC3-208ENST00000622836 GRIN3BO60391 1043 aa18.08■□□□□ 0.48
PCDHGC3-208ENST00000622836 YBX3P16989 372 aaKnown RBP eCLIP18.08■□□□□ 0.48
PCDHGC3-208ENST00000622836 AIMP1Q12904 312 aaKnown RBP18.08■□□□□ 0.48
PCDHGC3-208ENST00000622836 PDIA6Q15084 440 aa18.08■□□□□ 0.48
PCDHGC3-208ENST00000622836 HLFQ16534 295 aa18.08■□□□□ 0.48
PCDHGC3-208ENST00000622836 NBPF5PQ86XG9 351 aaPredicted RBP18.08■□□□□ 0.48
PCDHGC3-208ENST00000622836 CNBD1Q8NA66 436 aa18.08■□□□□ 0.48
PCDHGC3-208ENST00000622836 DDX21Q9NR30 783 aaKnown RBP eCLIP18.08■□□□□ 0.48
PCDHGC3-208ENST00000622836 CHPF2Q9P2E5 772 aa18.08■□□□□ 0.48
PCDHGC3-208ENST00000622836 AFDNP55196 1824 aaKnown RBP18.07■□□□□ 0.48
PCDHGC3-208ENST00000622836 IL16Q14005 1332 aa18.07■□□□□ 0.48
PCDHGC3-208ENST00000622836 FAM177BA6PVY3 158 aa18.07■□□□□ 0.48
PCDHGC3-208ENST00000622836 RGL2O15211 777 aa18.07■□□□□ 0.48
PCDHGC3-208ENST00000622836 ST5P78524 1137 aa18.07■□□□□ 0.48
PCDHGC3-208ENST00000622836 WDR63Q8IWG1 891 aa18.07■□□□□ 0.48
PCDHGC3-208ENST00000622836 DBF4Q9UBU7 674 aaPredicted RBP18.07■□□□□ 0.48
PCDHGC3-208ENST00000622836 N4BP2Q86UW6 1770 aaPredicted RBP18.07■□□□□ 0.48
PCDHGC3-208ENST00000622836 CHRNA5P30532 468 aa18.06■□□□□ 0.48
PCDHGC3-208ENST00000622836 COPS6Q7L5N1 327 aa18.06■□□□□ 0.48
PCDHGC3-208ENST00000622836 CCDC24Q8N4L8 307 aa18.06■□□□□ 0.48
PCDHGC3-208ENST00000622836 C8orf58Q8NAV2 365 aa18.06■□□□□ 0.48
PCDHGC3-208ENST00000622836 XAGE3Q8WTP9 111 aa18.06■□□□□ 0.48
PCDHGC3-208ENST00000622836 CHMP4AQ9BY43 222 aa18.06■□□□□ 0.48
PCDHGC3-208ENST00000622836 BCS1LQ9Y276 419 aa18.06■□□□□ 0.48
PCDHGC3-208ENST00000622836 GOLGB1Q14789 3259 aaKnown RBP18.05■□□□□ 0.48
PCDHGC3-208ENST00000622836 GTF2E1P29083 439 aaPredicted RBP18.05■□□□□ 0.48
PCDHGC3-208ENST00000622836 PRR5LQ6MZQ0 368 aa18.05■□□□□ 0.48
PCDHGC3-208ENST00000622836 NRXN2Q9P2S2 1712 aa18.04■□□□□ 0.48
PCDHGC3-208ENST00000622836 YY1P25490 414 aa18.04■□□□□ 0.48
PCDHGC3-208ENST00000622836 TPTE2Q6XPS3 522 aa18.04■□□□□ 0.48
PCDHGC3-208ENST00000622836 LRP10Q7Z4F1 713 aa18.04■□□□□ 0.48
PCDHGC3-208ENST00000622836 HYPKQ9NX55 129 aa18.04■□□□□ 0.48
PCDHGC3-208ENST00000622836 PIM2Q9P1W9 311 aa18.04■□□□□ 0.48
PCDHGC3-208ENST00000622836 H0YIN7 160 aa18.03■□□□□ 0.48
PCDHGC3-208ENST00000622836 GPTP24298 496 aa18.03■□□□□ 0.48
PCDHGC3-208ENST00000622836 PDE6BP35913 854 aa18.03■□□□□ 0.48
PCDHGC3-208ENST00000622836 GIGYF2Q6Y7W6 1299 aaKnown RBP18.03■□□□□ 0.48
PCDHGC3-208ENST00000622836 C2CD5Q86YS7 1000 aa18.03■□□□□ 0.48
PCDHGC3-208ENST00000622836 BRIP1Q9BX63 1249 aa18.03■□□□□ 0.48
PCDHGC3-208ENST00000622836 FANCIQ9NVI1 1328 aa18.02■□□□□ 0.48
PCDHGC3-208ENST00000622836 KCNA3P22001 575 aa18.02■□□□□ 0.48
PCDHGC3-208ENST00000622836 TWISTNBQ3B726 338 aaPredicted RBP18.02■□□□□ 0.48
PCDHGC3-208ENST00000622836 DALRD3Q5D0E6 543 aaKnown RBP18.02■□□□□ 0.48
PCDHGC3-208ENST00000622836 CCDC30Q5VVM6 783 aa18.02■□□□□ 0.48
PCDHGC3-208ENST00000622836 MIER1Q8N108 512 aa18.02■□□□□ 0.48
PCDHGC3-208ENST00000622836 TSPYL6Q8N831 410 aa18.02■□□□□ 0.48
PCDHGC3-208ENST00000622836 MYH16Q9H6N6 1097 aa18.02■□□□□ 0.48
PCDHGC3-208ENST00000622836 KIAA1551Q9HCM1 1747 aa18.02■□□□□ 0.48
PCDHGC3-208ENST00000622836 ATP10DQ9P241 1426 aa18.01■□□□□ 0.47
PCDHGC3-208ENST00000622836 NUP98P52948 1817 aa18.01■□□□□ 0.47
PCDHGC3-208ENST00000622836 GOLGA2Q08379 1002 aa18.01■□□□□ 0.47
PCDHGC3-208ENST00000622836 NYXQ9GZU5 481 aa18.01■□□□□ 0.47
PCDHGC3-208ENST00000622836 HSP90AB3PQ58FF7 597 aa18■□□□□ 0.47
PCDHGC3-208ENST00000622836 ZNF622Q969S3 477 aaKnown RBP eCLIP18■□□□□ 0.47
PCDHGC3-208ENST00000622836 STK31Q9BXU1 1019 aa18■□□□□ 0.47
PCDHGC3-208ENST00000622836 PDZRN3Q9UPQ7 1066 aa18■□□□□ 0.47
PCDHGC3-208ENST00000622836 UTRNP46939 3433 aa17.99■□□□□ 0.47
PCDHGC3-208ENST00000622836 ANKRD13DQ6ZTN6 518 aa17.99■□□□□ 0.47
PCDHGC3-208ENST00000622836 UBN2Q6ZU65 1347 aa17.98■□□□□ 0.47
PCDHGC3-208ENST00000622836 TCERG1O14776 1098 aaKnown RBP17.98■□□□□ 0.47
PCDHGC3-208ENST00000622836 PARP10Q53GL7 1025 aa17.98■□□□□ 0.47
PCDHGC3-208ENST00000622836 PPP1R42Q7Z4L9 355 aa17.98■□□□□ 0.47
PCDHGC3-208ENST00000622836 ZNF34Q8IZ26 560 aa17.98■□□□□ 0.47
PCDHGC3-208ENST00000622836 PLBD2Q8NHP8 589 aa17.98■□□□□ 0.47
PCDHGC3-208ENST00000622836 CHD4Q14839 1912 aa17.98■□□□□ 0.47
PCDHGC3-208ENST00000622836 EXOSC9Q06265 439 aaKnown RBP17.97■□□□□ 0.47
PCDHGC3-208ENST00000622836 SUSD4Q5VX71 490 aa17.97■□□□□ 0.47
PCDHGC3-208ENST00000622836 ARHGAP27Q6ZUM4 889 aa17.97■□□□□ 0.47
PCDHGC3-208ENST00000622836 RIC3Q7Z5B4 369 aa17.97■□□□□ 0.47
PCDHGC3-208ENST00000622836 NUTM1Q86Y26 1132 aa17.97■□□□□ 0.47
PCDHGC3-208ENST00000622836 TTLL6Q8N841 843 aa17.97■□□□□ 0.47
PCDHGC3-208ENST00000622836 PHAXQ9H814 394 aaKnown RBP17.97■□□□□ 0.47
PCDHGC3-208ENST00000622836 SPINK5Q9NQ38 1064 aaPredicted RBP17.97■□□□□ 0.47
PCDHGC3-208ENST00000622836 TCIRG1Q13488 830 aa17.96■□□□□ 0.47
PCDHGC3-208ENST00000622836 BRCA1P38398 1863 aaKnown RBP17.96■□□□□ 0.47
PCDHGC3-208ENST00000622836 ANKRD31Q8N7Z5 1873 aa17.96■□□□□ 0.47
PCDHGC3-208ENST00000622836 DDX58O95786 925 aaKnown RBP17.95■□□□□ 0.46
PCDHGC3-208ENST00000622836 ERFEQ4G0M1 354 aa17.95■□□□□ 0.46
PCDHGC3-208ENST00000622836 UTP14AQ9BVJ6 771 aaKnown RBP17.95■□□□□ 0.46
PCDHGC3-208ENST00000622836 ZNF521Q96K83 1311 aa17.95■□□□□ 0.46
PCDHGC3-208ENST00000622836 IBTKQ9P2D0 1353 aaPredicted RBP17.94■□□□□ 0.46
PCDHGC3-208ENST00000622836 SRGNP10124 158 aa17.94■□□□□ 0.46
PCDHGC3-208ENST00000622836 MASTLQ96GX5 879 aa17.94■□□□□ 0.46
PCDHGC3-208ENST00000622836 NTSR2O95665 410 aa17.93■□□□□ 0.46
PCDHGC3-208ENST00000622836 SLC4A2P04920 1241 aa17.93■□□□□ 0.46
PCDHGC3-208ENST00000622836 STYK1Q6J9G0 422 aa17.93■□□□□ 0.46
PCDHGC3-208ENST00000622836 CNKSR1Q969H4 720 aa17.93■□□□□ 0.46
PCDHGC3-208ENST00000622836 ZNF428Q96B54 188 aa17.93■□□□□ 0.46
PCDHGC3-208ENST00000622836 DLEC1Q9Y238 1755 aa17.93■□□□□ 0.46
PCDHGC3-208ENST00000622836 ABCC12Q96J65 1359 aa17.92■□□□□ 0.46
PCDHGC3-208ENST00000622836 E9PSI1 815 aa17.92■□□□□ 0.46
PCDHGC3-208ENST00000622836 ATP5J2-PTCD1G3V325 749 aa17.92■□□□□ 0.46
PCDHGC3-208ENST00000622836 VAMP4O75379 141 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms