RNA–Protein interactions for RNA: ENST00000620536.4

ATXN3-252, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-252ENST00000620536 TOMM70O94826 608 aa31.61■■■□□ 2.65
ATXN3-252ENST00000620536 HSPA6P17066 643 aa31.61■■■□□ 2.65
ATXN3-252ENST00000620536 NIP7Q9Y221 180 aaKnown RBP eCLIP31.61■■■□□ 2.65
ATXN3-252ENST00000620536 LAMB4A4D0S4 1761 aa31.6■■■□□ 2.65
ATXN3-252ENST00000620536 TPTE2Q6XPS3 522 aa31.59■■■□□ 2.65
ATXN3-252ENST00000620536 NGEFQ8N5V2 710 aa31.59■■■□□ 2.65
ATXN3-252ENST00000620536 C21orf2O43822 256 aa31.58■■■□□ 2.65
ATXN3-252ENST00000620536 LMOD3Q0VAK6 560 aa31.58■■■□□ 2.65
ATXN3-252ENST00000620536 STYK1Q6J9G0 422 aa31.58■■■□□ 2.65
ATXN3-252ENST00000620536 C16orf71Q8IYS4 520 aaPredicted RBP31.58■■■□□ 2.65
ATXN3-252ENST00000620536 CNKSR1Q969H4 720 aa31.58■■■□□ 2.65
ATXN3-252ENST00000620536 ZNF219Q9P2Y4 722 aaPredicted RBP31.58■■■□□ 2.65
ATXN3-252ENST00000620536 TSPYL4Q9UJ04 414 aa31.58■■■□□ 2.65
ATXN3-252ENST00000620536 RRP7AQ9Y3A4 280 aaKnown RBP31.58■■■□□ 2.65
ATXN3-252ENST00000620536 ZC3H4Q9UPT8 1303 aaKnown RBP31.57■■■□□ 2.64
ATXN3-252ENST00000620536 SRGNP10124 158 aa31.57■■■□□ 2.64
ATXN3-252ENST00000620536 MASTLQ96GX5 879 aa31.57■■■□□ 2.64
ATXN3-252ENST00000620536 TMPOP42166 694 aaKnown RBP31.56■■■□□ 2.64
ATXN3-252ENST00000620536 HLFQ16534 295 aa31.56■■■□□ 2.64
ATXN3-252ENST00000620536 SBF1O95248 1867 aa31.55■■■□□ 2.64
ATXN3-252ENST00000620536 WDR43Q15061 677 aaKnown RBP eCLIP31.55■■■□□ 2.64
ATXN3-252ENST00000620536 COL11A2P13942 1736 aaPredicted RBP31.55■■■□□ 2.64
ATXN3-252ENST00000620536 FAM177BA6PVY3 158 aa31.54■■■□□ 2.64
ATXN3-252ENST00000620536 NFKBIEO00221 500 aa31.54■■■□□ 2.64
ATXN3-252ENST00000620536 MYL6BP14649 208 aa31.54■■■□□ 2.64
ATXN3-252ENST00000620536 KIF6Q6ZMV9 814 aa31.54■■■□□ 2.64
ATXN3-252ENST00000620536 ERVV-1B6SEH8 477 aa31.53■■■□□ 2.64
ATXN3-252ENST00000620536 PRELPP51888 382 aa31.53■■■□□ 2.64
ATXN3-252ENST00000620536 CCDC146Q8IYE0 955 aa31.53■■■□□ 2.64
ATXN3-252ENST00000620536 RRAGCQ9HB90 399 aa31.53■■■□□ 2.64
ATXN3-252ENST00000620536 GTF2E1P29083 439 aaPredicted RBP31.52■■■□□ 2.64
ATXN3-252ENST00000620536 PRPF40BQ6NWY9 871 aaKnown RBP31.52■■■□□ 2.64
ATXN3-252ENST00000620536 BABAM1Q9NWV8 329 aa31.52■■■□□ 2.64
ATXN3-252ENST00000620536 NEUROD2Q15784 382 aa31.51■■■□□ 2.63
ATXN3-252ENST00000620536 MAP3K15Q6ZN16 1313 aa31.5■■■□□ 2.63
ATXN3-252ENST00000620536 SOGA3Q5TF21 947 aa31.5■■■□□ 2.63
ATXN3-252ENST00000620536 ERBB4Q15303 1308 aa31.49■■■□□ 2.63
ATXN3-252ENST00000620536 NPR1P16066 1061 aa31.49■■■□□ 2.63
ATXN3-252ENST00000620536 TTLL7Q6ZT98 887 aa31.49■■■□□ 2.63
ATXN3-252ENST00000620536 RBM46Q8TBY0 533 aaKnown RBP31.49■■■□□ 2.63
ATXN3-252ENST00000620536 RUNDC1Q96C34 613 aa31.49■■■□□ 2.63
ATXN3-252ENST00000620536 NYXQ9GZU5 481 aa31.48■■■□□ 2.63
ATXN3-252ENST00000620536 KLRG2A4D1S0 409 aaPredicted RBP31.47■■■□□ 2.63
ATXN3-252ENST00000620536 GLTPD2A6NH11 291 aa31.47■■■□□ 2.63
ATXN3-252ENST00000620536 TAOK3Q9H2K8 898 aa31.47■■■□□ 2.63
ATXN3-252ENST00000620536 EIF2S2P20042 333 aaKnown RBP31.46■■■□□ 2.63
ATXN3-252ENST00000620536 ZBTB3Q9H5J0 574 aa31.46■■■□□ 2.63
ATXN3-252ENST00000620536 PRKRIP1Q9H875 184 aaPredicted RBP31.45■■■□□ 2.63
ATXN3-252ENST00000620536 ADAMTS8Q9UP79 889 aa31.45■■■□□ 2.63
ATXN3-252ENST00000620536 CEP350Q5VT06 3117 aa31.45■■■□□ 2.62
ATXN3-252ENST00000620536 LTBP3Q9NS15 1303 aa31.45■■■□□ 2.62
ATXN3-252ENST00000620536 TNRC6CQ9HCJ0 1690 aaKnown RBP31.44■■■□□ 2.62
ATXN3-252ENST00000620536 APLP1P51693 650 aa31.44■■■□□ 2.62
ATXN3-252ENST00000620536 ERFEQ4G0M1 354 aa31.44■■■□□ 2.62
ATXN3-252ENST00000620536 DPY19L2Q6NUT2 758 aa31.44■■■□□ 2.62
ATXN3-252ENST00000620536 SLX4Q8IY92 1834 aa31.42■■■□□ 2.62
ATXN3-252ENST00000620536 TIAM2Q8IVF5 1701 aa31.41■■■□□ 2.62
ATXN3-252ENST00000620536 VEGFAP15692 232 aaPredicted RBP31.41■■■□□ 2.62
ATXN3-252ENST00000620536 GPTP24298 496 aa31.41■■■□□ 2.62
ATXN3-252ENST00000620536 ALDH1B1P30837 517 aa31.41■■■□□ 2.62
ATXN3-252ENST00000620536 FSTL1Q12841 308 aa31.41■■■□□ 2.62
ATXN3-252ENST00000620536 LAS1LQ9Y4W2 734 aaKnown RBP31.41■■■□□ 2.62
ATXN3-252ENST00000620536 FER1L6Q2WGJ9 1857 aa31.4■■■□□ 2.62
ATXN3-252ENST00000620536 CCDC93Q567U6 631 aa31.4■■■□□ 2.62
ATXN3-252ENST00000620536 NUTM1Q86Y26 1132 aa31.4■■■□□ 2.62
ATXN3-252ENST00000620536 TRIM35Q9UPQ4 493 aa31.4■■■□□ 2.62
ATXN3-252ENST00000620536 ARFGEF2Q9Y6D5 1785 aa31.4■■■□□ 2.62
ATXN3-252ENST00000620536 GIGYF2Q6Y7W6 1299 aaKnown RBP31.39■■■□□ 2.62
ATXN3-252ENST00000620536 C7orf43Q8WVR3 580 aa31.39■■■□□ 2.62
ATXN3-252ENST00000620536 CACNA1SQ13698 1873 aa31.39■■■□□ 2.62
ATXN3-252ENST00000620536 CCDC88AQ3V6T2 1871 aa31.39■■■□□ 2.62
ATXN3-252ENST00000620536 CHL1O00533 1208 aa31.38■■■□□ 2.61
ATXN3-252ENST00000620536 PDIA6Q15084 440 aa31.38■■■□□ 2.61
ATXN3-252ENST00000620536 ZNF34Q8IZ26 560 aa31.38■■■□□ 2.61
ATXN3-252ENST00000620536 NUP98P52948 1817 aa31.38■■■□□ 2.61
ATXN3-252ENST00000620536 SUSD4Q5VX71 490 aa31.37■■■□□ 2.61
ATXN3-252ENST00000620536 NECTIN2Q92692 538 aa31.37■■■□□ 2.61
ATXN3-252ENST00000620536 UBN2Q6ZU65 1347 aa31.37■■■□□ 2.61
ATXN3-252ENST00000620536 IBTKQ9P2D0 1353 aaPredicted RBP31.36■■■□□ 2.61
ATXN3-252ENST00000620536 SMC1BQ8NDV3 1235 aa31.36■■■□□ 2.61
ATXN3-252ENST00000620536 ABCC12Q96J65 1359 aa31.35■■■□□ 2.61
ATXN3-252ENST00000620536 PROSER3Q2NL68 480 aa31.35■■■□□ 2.61
ATXN3-252ENST00000620536 LRP10Q7Z4F1 713 aa31.35■■■□□ 2.61
ATXN3-252ENST00000620536 PPP1R42Q7Z4L9 355 aa31.35■■■□□ 2.61
ATXN3-252ENST00000620536 ANXA1P04083 346 aa31.34■■■□□ 2.61
ATXN3-252ENST00000620536 CRY2Q49AN0 593 aa31.34■■■□□ 2.61
ATXN3-252ENST00000620536 RTKN2Q8IZC4 609 aa31.34■■■□□ 2.61
ATXN3-252ENST00000620536 RPGRQ92834 1020 aaKnown RBP31.34■■■□□ 2.61
ATXN3-252ENST00000620536 FKBP4Q02790 459 aaKnown RBP eCLIP31.33■■■□□ 2.61
ATXN3-252ENST00000620536 PARP10Q53GL7 1025 aa31.33■■■□□ 2.61
ATXN3-252ENST00000620536 NTSR2O95665 410 aa31.31■■■□□ 2.6
ATXN3-252ENST00000620536 AIMP1Q12904 312 aaKnown RBP31.31■■■□□ 2.6
ATXN3-252ENST00000620536 COPS6Q7L5N1 327 aa31.31■■■□□ 2.6
ATXN3-252ENST00000620536 DICER1Q9UPY3 1922 aaKnown RBP31.3■■■□□ 2.6
ATXN3-252ENST00000620536 KRT24Q2M2I5 525 aa31.3■■■□□ 2.6
ATXN3-252ENST00000620536 OLFM4Q6UX06 510 aa31.3■■■□□ 2.6
ATXN3-252ENST00000620536 RIC1Q4ADV7 1423 aa31.3■■■□□ 2.6
ATXN3-252ENST00000620536 XAGE3Q8WTP9 111 aa31.29■■■□□ 2.6
ATXN3-252ENST00000620536 DDX21Q9NR30 783 aaKnown RBP eCLIP31.29■■■□□ 2.6
ATXN3-252ENST00000620536 HSP90AB3PQ58FF7 597 aa31.28■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms