RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 KCTD17Q8N5Z5 321 aa10.58□□□□□ -0.72
SENP3-210ENST00000619785 SLC16A10Q8TF71 515 aa10.58□□□□□ -0.72
SENP3-210ENST00000619785 TATDN2Q93075 761 aa10.58□□□□□ -0.72
SENP3-210ENST00000619785 TRAIPQ9BWF2 469 aa10.58□□□□□ -0.72
SENP3-210ENST00000619785 TMEM134Q9H6X4 195 aa10.58□□□□□ -0.72
SENP3-210ENST00000619785 AXIN2Q9Y2T1 843 aa10.58□□□□□ -0.72
SENP3-210ENST00000619785 TAF1LQ8IZX4 1826 aa10.57□□□□□ -0.72
SENP3-210ENST00000619785 HOXB3P14651 431 aaPredicted RBP10.57□□□□□ -0.72
SENP3-210ENST00000619785 NDUFV2P19404 249 aa10.57□□□□□ -0.72
SENP3-210ENST00000619785 QPCTQ16769 361 aa10.57□□□□□ -0.72
SENP3-210ENST00000619785 DCAF11Q8TEB1 546 aa10.57□□□□□ -0.72
SENP3-210ENST00000619785 ADCY9O60503 1353 aa10.56□□□□□ -0.72
SENP3-210ENST00000619785 TRIM6-TRIM34B2RNG4 842 aa10.56□□□□□ -0.72
SENP3-210ENST00000619785 LILRB3O75022 631 aa10.56□□□□□ -0.72
SENP3-210ENST00000619785 NECTIN2Q92692 538 aa10.56□□□□□ -0.72
SENP3-210ENST00000619785 RAB3GAP2Q9H2M9 1393 aa10.55□□□□□ -0.72
SENP3-210ENST00000619785 KDM4AO75164 1064 aa10.55□□□□□ -0.72
SENP3-210ENST00000619785 GIGYF1O75420 1035 aaPredicted RBP10.55□□□□□ -0.72
SENP3-210ENST00000619785 TOM1L2Q6ZVM7 507 aa10.55□□□□□ -0.72
SENP3-210ENST00000619785 DOT1LQ8TEK3 1739 aa10.55□□□□□ -0.72
SENP3-210ENST00000619785 USP17L8P0C7I0 530 aa10.54□□□□□ -0.72
SENP3-210ENST00000619785 PRPF38BQ5VTL8 546 aaKnown RBP10.54□□□□□ -0.72
SENP3-210ENST00000619785 TBC1D2BQ9UPU7 963 aa10.54□□□□□ -0.72
SENP3-210ENST00000619785 PCDHB15Q9Y5E8 787 aa10.54□□□□□ -0.72
SENP3-210ENST00000619785 CICQ96RK0 1608 aaPredicted RBP10.54□□□□□ -0.72
SENP3-210ENST00000619785 USP31Q70CQ4 1352 aa10.53□□□□□ -0.72
SENP3-210ENST00000619785 USP46P62068 366 aa10.53□□□□□ -0.72
SENP3-210ENST00000619785 ZNF827Q17R98 1081 aa10.53□□□□□ -0.72
SENP3-210ENST00000619785 RTL5Q5HYW3 569 aaPredicted RBP10.53□□□□□ -0.72
SENP3-210ENST00000619785 AEBP1Q8IUX7 1158 aa10.53□□□□□ -0.72
SENP3-210ENST00000619785 KCNH5Q8NCM2 988 aa10.53□□□□□ -0.72
SENP3-210ENST00000619785 ZBTB3Q9H5J0 574 aa10.53□□□□□ -0.72
SENP3-210ENST00000619785 TTC21AQ8NDW8 1320 aa10.53□□□□□ -0.72
SENP3-210ENST00000619785 EXOC5O00471 708 aa10.52□□□□□ -0.73
SENP3-210ENST00000619785 GLMNQ92990 594 aa10.52□□□□□ -0.73
SENP3-210ENST00000619785 LRRC4BQ9NT99 713 aa10.52□□□□□ -0.73
SENP3-210ENST00000619785 C5P01031 1676 aa10.52□□□□□ -0.73
SENP3-210ENST00000619785 PNPLA7Q6ZV29 1317 aa10.52□□□□□ -0.73
SENP3-210ENST00000619785 CENPJQ9HC77 1338 aaPredicted RBP10.52□□□□□ -0.73
SENP3-210ENST00000619785 KIF13BQ9NQT8 1826 aa10.51□□□□□ -0.73
SENP3-210ENST00000619785 C3orf80F5H4A9 247 aa10.51□□□□□ -0.73
SENP3-210ENST00000619785 SLC27A3Q5K4L6 730 aa10.51□□□□□ -0.73
SENP3-210ENST00000619785 RETREG2Q8NC44 543 aa10.51□□□□□ -0.73
SENP3-210ENST00000619785 NDUFB9Q9Y6M9 179 aa10.51□□□□□ -0.73
SENP3-210ENST00000619785 ERBB3P21860 1342 aa10.51□□□□□ -0.73
SENP3-210ENST00000619785 TOGARAM1Q9Y4F4 1720 aa10.5□□□□□ -0.73
SENP3-210ENST00000619785 PDE4CQ08493 712 aa10.5□□□□□ -0.73
SENP3-210ENST00000619785 TTC21BQ7Z4L5 1316 aa10.5□□□□□ -0.73
SENP3-210ENST00000619785 NSD2O96028 1365 aa10.5□□□□□ -0.73
SENP3-210ENST00000619785 UBR3Q6ZT12 1888 aa10.49□□□□□ -0.73
SENP3-210ENST00000619785 SMAPO00193 183 aa10.49□□□□□ -0.73
SENP3-210ENST00000619785 FDX1P10109 184 aa10.49□□□□□ -0.73
SENP3-210ENST00000619785 SCUBE2Q9NQ36 999 aa10.49□□□□□ -0.73
SENP3-210ENST00000619785 CABP1Q9NZU7 370 aa10.49□□□□□ -0.73
SENP3-210ENST00000619785 KIAA1551Q9HCM1 1747 aa10.49□□□□□ -0.73
SENP3-210ENST00000619785 RGPD2P0DJD1 1756 aa10.49□□□□□ -0.73
SENP3-210ENST00000619785 ATP10DQ9P241 1426 aa10.49□□□□□ -0.73
SENP3-210ENST00000619785 CD163L1Q9NR16 1453 aa10.49□□□□□ -0.73
SENP3-210ENST00000619785 POM121CA8CG34 1229 aa10.48□□□□□ -0.73
SENP3-210ENST00000619785 GRIN3BO60391 1043 aa10.48□□□□□ -0.73
SENP3-210ENST00000619785 GCGRP47871 477 aa10.48□□□□□ -0.73
SENP3-210ENST00000619785 GPR162Q16538 588 aa10.48□□□□□ -0.73
SENP3-210ENST00000619785 NBPF1Q3BBV0 1214 aa10.48□□□□□ -0.73
SENP3-210ENST00000619785 SBNO2Q9Y2G9 1366 aa10.48□□□□□ -0.73
SENP3-210ENST00000619785 BRCA1P38398 1863 aaKnown RBP10.47□□□□□ -0.73
SENP3-210ENST00000619785 HOXA2O43364 376 aa10.47□□□□□ -0.73
SENP3-210ENST00000619785 YBX3P16989 372 aaKnown RBP eCLIP10.47□□□□□ -0.739e-6■□□□□ 10.4
SENP3-210ENST00000619785 HSPA6P17066 643 aa10.47□□□□□ -0.73
SENP3-210ENST00000619785 SRPK2P78362 688 aaKnown RBP10.47□□□□□ -0.73
SENP3-210ENST00000619785 MAP2P11137 1827 aaKnown RBP10.47□□□□□ -0.73
SENP3-210ENST00000619785 IL2RBP14784 551 aa10.46□□□□□ -0.73
SENP3-210ENST00000619785 SLC4A3P48751 1232 aa10.46□□□□□ -0.73
SENP3-210ENST00000619785 WASHC4Q2M389 1173 aa10.46□□□□□ -0.73
SENP3-210ENST00000619785 PROX2Q3B8N5 592 aa10.46□□□□□ -0.73
SENP3-210ENST00000619785 NLGN2Q8NFZ4 835 aa10.46□□□□□ -0.73
SENP3-210ENST00000619785 HELBQ8NG08 1087 aaPredicted RBP10.46□□□□□ -0.73
SENP3-210ENST00000619785 TSC1Q92574 1164 aa10.46□□□□□ -0.73
SENP3-210ENST00000619785 KCNK17Q96T54 332 aa10.46□□□□□ -0.73
SENP3-210ENST00000619785 ANKRD36BQ8N2N9 1353 aa10.46□□□□□ -0.74
SENP3-210ENST00000619785 ITGB4P16144 1822 aa10.46□□□□□ -0.74
SENP3-210ENST00000619785 POLD1P28340 1107 aa10.45□□□□□ -0.74
SENP3-210ENST00000619785 WDR90Q96KV7 1748 aa10.44□□□□□ -0.74
SENP3-210ENST00000619785 MAMSTRQ6ZN01 415 aa10.44□□□□□ -0.74
SENP3-210ENST00000619785 EVC2Q86UK5 1308 aa10.43□□□□□ -0.74
SENP3-210ENST00000619785 SNPHO15079 494 aa10.43□□□□□ -0.74
SENP3-210ENST00000619785 MTMR2Q13614 643 aa10.43□□□□□ -0.74
SENP3-210ENST00000619785 HDGFL1Q5TGJ6 251 aa10.43□□□□□ -0.74
SENP3-210ENST00000619785 SP7Q8TDD2 431 aaPredicted RBP10.43□□□□□ -0.74
SENP3-210ENST00000619785 ACSBG1Q96GR2 724 aa10.43□□□□□ -0.74
SENP3-210ENST00000619785 KIAA1468Q9P260 1216 aa10.43□□□□□ -0.74
SENP3-210ENST00000619785 CD2APQ9Y5K6 639 aa10.43□□□□□ -0.74
SENP3-210ENST00000619785 ARFGEF1Q9Y6D6 1849 aa10.42□□□□□ -0.74
SENP3-210ENST00000619785 C4BP0C0L5 1744 aa10.42□□□□□ -0.74
SENP3-210ENST00000619785 CTDSPL2Q05D32 466 aa10.42□□□□□ -0.74
SENP3-210ENST00000619785 GRIPAP1Q4V328 841 aa10.42□□□□□ -0.74
SENP3-210ENST00000619785 PKD1L3Q7Z443 1732 aa10.41□□□□□ -0.74
SENP3-210ENST00000619785 KTN1Q86UP2 1357 aaKnown RBP10.41□□□□□ -0.74
SENP3-210ENST00000619785 ZNF831Q5JPB2 1677 aa10.41□□□□□ -0.74
SENP3-210ENST00000619785 CSB-PGBD3P0DP91 1061 aa10.41□□□□□ -0.74
SENP3-210ENST00000619785 GUCA2AQ02747 115 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms