RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 HYPKQ9NX55 129 aa24.5■■□□□ 1.51
NEK3-208ENST00000618534 ANKARQ7Z5J8 1434 aa24.5■■□□□ 1.51
NEK3-208ENST00000618534 TTC41PQ6P2S7 1318 aa24.49■■□□□ 1.51
NEK3-208ENST00000618534 PTH1RQ03431 593 aa24.49■■□□□ 1.51
NEK3-208ENST00000618534 KIF13AQ9H1H9 1805 aa24.49■■□□□ 1.51
NEK3-208ENST00000618534 SLIT1O75093 1534 aa24.49■■□□□ 1.51
NEK3-208ENST00000618534 CCDC83Q8IWF9 413 aa24.49■■□□□ 1.51
NEK3-208ENST00000618534 KDM3BQ7LBC6 1761 aa24.48■■□□□ 1.51
NEK3-208ENST00000618534 ADCY9O60503 1353 aa24.48■■□□□ 1.51
NEK3-208ENST00000618534 ARHGAP23Q9P227 1491 aa24.48■■□□□ 1.51
NEK3-208ENST00000618534 C14orf37Q86TY3 774 aa24.48■■□□□ 1.51
NEK3-208ENST00000618534 ZNF830Q96NB3 372 aaPredicted RBP24.48■■□□□ 1.51
NEK3-208ENST00000618534 ZMYND15Q9H091 742 aa24.48■■□□□ 1.51
NEK3-208ENST00000618534 ADCK5Q3MIX3 580 aa24.47■■□□□ 1.51
NEK3-208ENST00000618534 LETM1O95202 739 aaPredicted RBP24.47■■□□□ 1.51
NEK3-208ENST00000618534 ADCY5O95622 1261 aa24.47■■□□□ 1.51
NEK3-208ENST00000618534 HOXB7P09629 217 aa24.47■■□□□ 1.51
NEK3-208ENST00000618534 JAKMIP1Q96N16 626 aaKnown RBP24.47■■□□□ 1.51
NEK3-208ENST00000618534 LTN1O94822 1766 aa24.47■■□□□ 1.51
NEK3-208ENST00000618534 GJB2P29033 226 aa24.46■■□□□ 1.51
NEK3-208ENST00000618534 PRPF40BQ6NWY9 871 aaKnown RBP24.46■■□□□ 1.51
NEK3-208ENST00000618534 ATP6V1DQ9Y5K8 247 aa24.46■■□□□ 1.51
NEK3-208ENST00000618534 DYNC1I1O14576 645 aa24.46■■□□□ 1.51
NEK3-208ENST00000618534 PDRG1Q9NUG6 133 aa24.46■■□□□ 1.51
NEK3-208ENST00000618534 ZBTB7CA1YPR0 619 aa24.45■■□□□ 1.51
NEK3-208ENST00000618534 PLPPR3Q6T4P5 718 aa24.45■■□□□ 1.51
NEK3-208ENST00000618534 CLASRPQ8N2M8 674 aaKnown RBP24.45■■□□□ 1.51
NEK3-208ENST00000618534 RUFY2Q8WXA3 655 aa24.45■■□□□ 1.51
NEK3-208ENST00000618534 DNM1Q05193 864 aaKnown RBP24.45■■□□□ 1.5
NEK3-208ENST00000618534 NBPF6Q5VWK0 638 aa24.45■■□□□ 1.5
NEK3-208ENST00000618534 NBPF4Q96M43 638 aa24.45■■□□□ 1.5
NEK3-208ENST00000618534 MTMR6Q9Y217 621 aa24.45■■□□□ 1.5
NEK3-208ENST00000618534 VPS53Q5VIR6 699 aa24.44■■□□□ 1.5
NEK3-208ENST00000618534 MTX1Q13505 466 aa24.44■■□□□ 1.5
NEK3-208ENST00000618534 MAP7D2Q96T17 732 aa24.44■■□□□ 1.5
NEK3-208ENST00000618534 ECHDC1Q9NTX5 307 aa24.44■■□□□ 1.5
NEK3-208ENST00000618534 ST3GAL1Q11201 340 aa24.43■■□□□ 1.5
NEK3-208ENST00000618534 GIMAP6Q6P9H5 292 aa24.43■■□□□ 1.5
NEK3-208ENST00000618534 PA2G4Q9UQ80 394 aaKnown RBP24.43■■□□□ 1.5
NEK3-208ENST00000618534 KCNA6P17658 529 aa24.43■■□□□ 1.5
NEK3-208ENST00000618534 DDX54Q8TDD1 881 aaKnown RBP24.43■■□□□ 1.5
NEK3-208ENST00000618534 FUCA2Q9BTY2 467 aa24.43■■□□□ 1.5
NEK3-208ENST00000618534 TTC12Q9H892 705 aaPredicted RBP24.43■■□□□ 1.5
NEK3-208ENST00000618534 ZSWIM6Q9HCJ5 1215 aa24.43■■□□□ 1.5
NEK3-208ENST00000618534 PIBF1Q8WXW3 757 aa24.42■■□□□ 1.5
NEK3-208ENST00000618534 CYP46A1Q9Y6A2 500 aa24.42■■□□□ 1.5
NEK3-208ENST00000618534 BTBD11A6QL63 1104 aa24.41■■□□□ 1.5
NEK3-208ENST00000618534 DNTTIP2Q5QJE6 756 aaKnown RBP24.41■■□□□ 1.5
NEK3-208ENST00000618534 IP6K1Q92551 441 aa24.41■■□□□ 1.5
NEK3-208ENST00000618534 KCNB2Q92953 911 aa24.41■■□□□ 1.5
NEK3-208ENST00000618534 TM6SF1Q9BZW5 370 aa24.41■■□□□ 1.5
NEK3-208ENST00000618534 KDM4AO75164 1064 aa24.41■■□□□ 1.5
NEK3-208ENST00000618534 TEFQ10587 303 aa24.41■■□□□ 1.5
NEK3-208ENST00000618534 ZSCAN31Q96LW9 406 aaPredicted RBP24.41■■□□□ 1.5
NEK3-208ENST00000618534 SH2B1Q9NRF2 756 aaPredicted RBP24.41■■□□□ 1.5
NEK3-208ENST00000618534 SETD1BQ9UPS6 1966 aaKnown RBP24.4■■□□□ 1.5
NEK3-208ENST00000618534 VPS37CA5D8V6 355 aaPredicted RBP24.4■■□□□ 1.5
NEK3-208ENST00000618534 IFIT2P09913 472 aaKnown RBP24.4■■□□□ 1.5
NEK3-208ENST00000618534 MAP3K2Q9Y2U5 619 aa24.4■■□□□ 1.5
NEK3-208ENST00000618534 CCDC171Q6TFL3 1326 aa24.4■■□□□ 1.5
NEK3-208ENST00000618534 ME3Q16798 604 aa24.4■■□□□ 1.5
NEK3-208ENST00000618534 C17orf53Q8N3J3 647 aaPredicted RBP24.4■■□□□ 1.5
NEK3-208ENST00000618534 GPATCH3Q96I76 525 aa24.4■■□□□ 1.5
NEK3-208ENST00000618534 CHMP4AQ9BY43 222 aa24.4■■□□□ 1.5
NEK3-208ENST00000618534 C9orf78Q9NZ63 289 aaPredicted RBP24.4■■□□□ 1.5
NEK3-208ENST00000618534 NOLC1Q14978 699 aaKnown RBP eCLIP24.39■■□□□ 1.5
NEK3-208ENST00000618534 NECTIN1Q15223 517 aa24.39■■□□□ 1.5
NEK3-208ENST00000618534 NECAB1Q8N987 351 aa24.39■■□□□ 1.5
NEK3-208ENST00000618534 MPRIPQ6WCQ1 1025 aa24.39■■□□□ 1.49
NEK3-208ENST00000618534 PROSER3Q2NL68 480 aa24.38■■□□□ 1.49
NEK3-208ENST00000618534 ZNF530Q6P9A1 599 aaPredicted RBP24.38■■□□□ 1.49
NEK3-208ENST00000618534 AACSQ86V21 672 aa24.38■■□□□ 1.49
NEK3-208ENST00000618534 EVI5LQ96CN4 794 aa24.38■■□□□ 1.49
NEK3-208ENST00000618534 DBF4Q9UBU7 674 aaPredicted RBP24.38■■□□□ 1.49
NEK3-208ENST00000618534 LMO7Q8WWI1 1683 aa24.38■■□□□ 1.49
NEK3-208ENST00000618534 RBM8AQ9Y5S9 174 aaKnown RBP24.37■■□□□ 1.49
NEK3-208ENST00000618534 RGPD2P0DJD1 1756 aa24.37■■□□□ 1.49
NEK3-208ENST00000618534 NFAT5O94916 1531 aa24.37■■□□□ 1.49
NEK3-208ENST00000618534 PLCB2Q00722 1185 aa24.37■■□□□ 1.49
NEK3-208ENST00000618534 CWF19L2Q2TBE0 894 aaKnown RBP24.37■■□□□ 1.49
NEK3-208ENST00000618534 AP5Z1O43299 807 aa24.36■■□□□ 1.49
NEK3-208ENST00000618534 ALDH1L1O75891 902 aa24.36■■□□□ 1.49
NEK3-208ENST00000618534 CREB3L3Q68CJ9 461 aa24.36■■□□□ 1.49
NEK3-208ENST00000618534 ERC1Q8IUD2 1116 aa24.36■■□□□ 1.49
NEK3-208ENST00000618534 FAM227BQ96M60 508 aa24.36■■□□□ 1.49
NEK3-208ENST00000618534 TPCN1Q9ULQ1 816 aa24.36■■□□□ 1.49
NEK3-208ENST00000618534 ZKSCAN1P17029 563 aaPredicted RBP24.36■■□□□ 1.49
NEK3-208ENST00000618534 AKAP4Q5JQC9 854 aa24.36■■□□□ 1.49
NEK3-208ENST00000618534 MYRIPQ8NFW9 859 aa24.36■■□□□ 1.49
NEK3-208ENST00000618534 LRRC59Q96AG4 307 aaKnown RBP24.36■■□□□ 1.49
NEK3-208ENST00000618534 COL9A3Q14050 684 aaPredicted RBP24.35■■□□□ 1.49
NEK3-208ENST00000618534 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.35■■□□□ 1.49
NEK3-208ENST00000618534 KCNJ4P48050 445 aa24.34■■□□□ 1.49
NEK3-208ENST00000618534 NMIQ13287 307 aaPredicted RBP24.34■■□□□ 1.49
NEK3-208ENST00000618534 PKNOX2Q96KN3 472 aa24.34■■□□□ 1.49
NEK3-208ENST00000618534 PHF8Q9UPP1 1060 aa24.34■■□□□ 1.49
NEK3-208ENST00000618534 KSR2Q6VAB6 950 aa24.34■■□□□ 1.49
NEK3-208ENST00000618534 CHD2O14647 1828 aaKnown RBP24.34■■□□□ 1.49
NEK3-208ENST00000618534 MTERF4Q7Z6M4 381 aaKnown RBP24.33■■□□□ 1.49
NEK3-208ENST00000618534 PXDNQ92626 1479 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms