RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 BOLA2Q9H3K6 86 aa12.88□□□□□ -0.35
CCDC144B-208ENST00000618081 SNAPC4Q5SXM2 1469 aa12.88□□□□□ -0.35
CCDC144B-208ENST00000618081 IFIT3O14879 490 aaKnown RBP12.88□□□□□ -0.35
CCDC144B-208ENST00000618081 UBE4AQ14139 1066 aa12.88□□□□□ -0.35
CCDC144B-208ENST00000618081 MICALCLQ6ZW33 695 aa12.88□□□□□ -0.35
CCDC144B-208ENST00000618081 TEX13AQ9BXU3 409 aaPredicted RBP12.88□□□□□ -0.35
CCDC144B-208ENST00000618081 KANK3Q6NY19 840 aa12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 BBXQ8WY36 941 aaPredicted RBP12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 IKBKGQ9Y6K9 419 aa12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 CABP5Q9NP86 173 aa12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 EXOC6BQ9Y2D4 811 aa12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 ABCC11Q96J66 1382 aa12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 IFI16Q16666 785 aaKnown RBP12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 RBM10P98175 930 aaKnown RBP12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 ALDH1L2Q3SY69 923 aa12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 GIMAP7Q8NHV1 300 aa12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 PLVAPQ9BX97 442 aa12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 ACTN2P35609 894 aa12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 GSTO1P78417 241 aa12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 MRPS9P82933 396 aaKnown RBP12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 DDX46Q7L014 1031 aaKnown RBP12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 USP37Q86T82 979 aa12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 UTP14AQ9BVJ6 771 aaKnown RBP12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 LMAN1P49257 510 aa12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 CCDC174Q6PII3 467 aa12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 BCCIPQ9P287 314 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 NBPF1Q3BBV0 1214 aa12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 TTC12Q9H892 705 aaPredicted RBP12.87□□□□□ -0.35
CCDC144B-208ENST00000618081 SYCE3A1L190 88 aa12.86□□□□□ -0.35
CCDC144B-208ENST00000618081 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC144B-208ENST00000618081 C6orf229H3BNL8 230 aa12.86□□□□□ -0.35
CCDC144B-208ENST00000618081 TBC1D5Q92609 795 aa12.86□□□□□ -0.35
CCDC144B-208ENST00000618081 NGLY1Q96IV0 654 aa12.86□□□□□ -0.35
CCDC144B-208ENST00000618081 LDHCP07864 332 aa12.86□□□□□ -0.35
CCDC144B-208ENST00000618081 KIF4BQ2VIQ3 1234 aa12.86□□□□□ -0.35
CCDC144B-208ENST00000618081 DHX37Q8IY37 1157 aaKnown RBP12.86□□□□□ -0.35
CCDC144B-208ENST00000618081 TMEM57Q8N5G2 664 aa12.86□□□□□ -0.35
CCDC144B-208ENST00000618081 PTPRCP08575 1304 aa12.86□□□□□ -0.35
CCDC144B-208ENST00000618081 MTIF2P46199 727 aaKnown RBP12.86□□□□□ -0.35
CCDC144B-208ENST00000618081 CAMSAP2Q08AD1 1489 aa12.86□□□□□ -0.35
CCDC144B-208ENST00000618081 BICD1Q96G01 975 aa12.86□□□□□ -0.35
CCDC144B-208ENST00000618081 DDX23Q9BUQ8 820 aaKnown RBP12.86□□□□□ -0.35
CCDC144B-208ENST00000618081 KAT14Q9H8E8 782 aa12.86□□□□□ -0.35
CCDC144B-208ENST00000618081 PPP1R42Q7Z4L9 355 aa12.86□□□□□ -0.35
CCDC144B-208ENST00000618081 SYNCQ9H7C4 482 aa12.86□□□□□ -0.35
CCDC144B-208ENST00000618081 LIG1P18858 919 aa12.85□□□□□ -0.35
CCDC144B-208ENST00000618081 FAM107BQ9H098 131 aa12.85□□□□□ -0.35
CCDC144B-208ENST00000618081 TRAF1Q13077 416 aa12.85□□□□□ -0.35
CCDC144B-208ENST00000618081 POTEB2H3BUK9 544 aa12.85□□□□□ -0.35
CCDC144B-208ENST00000618081 CCDC175P0C221 793 aa12.85□□□□□ -0.35
CCDC144B-208ENST00000618081 SPECC1Q5M775 1068 aa12.85□□□□□ -0.35
CCDC144B-208ENST00000618081 PRPF40BQ6NWY9 871 aaKnown RBP12.85□□□□□ -0.35
CCDC144B-208ENST00000618081 PUF60Q9UHX1 559 aaKnown RBP12.85□□□□□ -0.35
CCDC144B-208ENST00000618081 SPATA24Q86W54 205 aa12.85□□□□□ -0.35
CCDC144B-208ENST00000618081 ZGPATQ8N5A5 531 aaKnown RBP12.85□□□□□ -0.35
CCDC144B-208ENST00000618081 PSMD1Q99460 953 aa12.85□□□□□ -0.35
CCDC144B-208ENST00000618081 ADAMTS2O95450 1211 aa12.85□□□□□ -0.35
CCDC144B-208ENST00000618081 CA8P35219 290 aa12.85□□□□□ -0.35
CCDC144B-208ENST00000618081 RFC4P35249 363 aa12.84□□□□□ -0.35
CCDC144B-208ENST00000618081 TCERG1LQ5VWI1 586 aa12.84□□□□□ -0.35
CCDC144B-208ENST00000618081 GSDMDP57764 484 aa12.84□□□□□ -0.35
CCDC144B-208ENST00000618081 ERMNQ8TAM6 284 aa12.84□□□□□ -0.35
CCDC144B-208ENST00000618081 GOLGA8AA7E2F4 631 aa12.84□□□□□ -0.35
CCDC144B-208ENST00000618081 EXOC5O00471 708 aa12.84□□□□□ -0.35
CCDC144B-208ENST00000618081 GOLGA6L9A6NEM1 432 aa12.84□□□□□ -0.35
CCDC144B-208ENST00000618081 MFSD6Q6ZSS7 791 aa12.84□□□□□ -0.35
CCDC144B-208ENST00000618081 EVI5LQ96CN4 794 aa12.84□□□□□ -0.35
CCDC144B-208ENST00000618081 DBF4Q9UBU7 674 aaPredicted RBP12.84□□□□□ -0.35
CCDC144B-208ENST00000618081 WDR97A6NE52 1622 aa12.84□□□□□ -0.35
CCDC144B-208ENST00000618081 CTTNBP2Q8WZ74 1663 aa12.84□□□□□ -0.35
CCDC144B-208ENST00000618081 CCDC40Q4G0X9 1142 aa12.84□□□□□ -0.35
CCDC144B-208ENST00000618081 MIS18AQ9NYP9 233 aa12.84□□□□□ -0.35
CCDC144B-208ENST00000618081 HLTFQ14527 1009 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCDC144B-208ENST00000618081 MCM10Q7L590 875 aa12.84□□□□□ -0.35
CCDC144B-208ENST00000618081 LRSAM1Q6UWE0 723 aa12.84□□□□□ -0.35
CCDC144B-208ENST00000618081 EHBP1Q8NDI1 1231 aa12.84□□□□□ -0.35
CCDC144B-208ENST00000618081 CWC25Q9NXE8 425 aaPredicted RBP12.84□□□□□ -0.35
CCDC144B-208ENST00000618081 BACH2Q9BYV9 841 aa12.83□□□□□ -0.35
CCDC144B-208ENST00000618081 TSPY2A6NKD2 308 aa12.83□□□□□ -0.36
CCDC144B-208ENST00000618081 STX1AQ16623 288 aa12.83□□□□□ -0.36
CCDC144B-208ENST00000618081 TMEM67Q5HYA8 995 aa12.83□□□□□ -0.36
CCDC144B-208ENST00000618081 CLIP2Q9UDT6 1046 aa12.83□□□□□ -0.36
CCDC144B-208ENST00000618081 NEMFO60524 1076 aa12.83□□□□□ -0.36
CCDC144B-208ENST00000618081 MAP3K9P80192 1104 aa12.83□□□□□ -0.36
CCDC144B-208ENST00000618081 DMRT2Q9Y5R5 561 aa12.83□□□□□ -0.36
CCDC144B-208ENST00000618081 STX6O43752 255 aa12.83□□□□□ -0.36
CCDC144B-208ENST00000618081 NOP2P46087 812 aaKnown RBP12.83□□□□□ -0.36
CCDC144B-208ENST00000618081 MPNDQ8N594 471 aa12.83□□□□□ -0.36
CCDC144B-208ENST00000618081 TTC21BQ7Z4L5 1316 aa12.83□□□□□ -0.36
CCDC144B-208ENST00000618081 PRC1O43663 620 aa12.83□□□□□ -0.36
CCDC144B-208ENST00000618081 TMCO5BA8MYB1 307 aa12.83□□□□□ -0.36
CCDC144B-208ENST00000618081 TBCAO75347 108 aaKnown RBP12.83□□□□□ -0.36
CCDC144B-208ENST00000618081 TNNT1P13805 278 aa12.83□□□□□ -0.36
CCDC144B-208ENST00000618081 PRPF4BQ13523 1007 aaKnown RBP12.83□□□□□ -0.36
CCDC144B-208ENST00000618081 PPP1R14CQ8TAE6 165 aa12.83□□□□□ -0.36
CCDC144B-208ENST00000618081 C6orf163Q5TEZ5 329 aa12.82□□□□□ -0.36
CCDC144B-208ENST00000618081 SPECC1LQ69YQ0 1117 aa12.82□□□□□ -0.36
CCDC144B-208ENST00000618081 CCDC82Q8N4S0 544 aa12.82□□□□□ -0.36
CCDC144B-208ENST00000618081 EXOC1Q9NV70 894 aa12.82□□□□□ -0.36
CCDC144B-208ENST00000618081 RAPGEF3O95398 923 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms