RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 HLFQ16534 295 aa24.43■■□□□ 1.5
SUSD3-205ENST00000617293 C8orf58Q8NAV2 365 aa24.43■■□□□ 1.5
SUSD3-205ENST00000617293 KIF13BQ9NQT8 1826 aa24.42■■□□□ 1.5
SUSD3-205ENST00000617293 TGFB2P61812 414 aa24.42■■□□□ 1.5
SUSD3-205ENST00000617293 DDX21Q9NR30 783 aaKnown RBP eCLIP24.42■■□□□ 1.5
SUSD3-205ENST00000617293 CHPF2Q9P2E5 772 aa24.42■■□□□ 1.5
SUSD3-205ENST00000617293 WWC3Q9ULE0 1092 aa24.42■■□□□ 1.5
SUSD3-205ENST00000617293 MAP3K15Q6ZN16 1313 aa24.41■■□□□ 1.5
SUSD3-205ENST00000617293 A0A0G2JLW4 131 aa24.41■■□□□ 1.5
SUSD3-205ENST00000617293 ERVV-1B6SEH8 477 aa24.41■■□□□ 1.5
SUSD3-205ENST00000617293 LRP10Q7Z4F1 713 aa24.41■■□□□ 1.5
SUSD3-205ENST00000617293 ZBTB3Q9H5J0 574 aa24.41■■□□□ 1.5
SUSD3-205ENST00000617293 RGL2O15211 777 aa24.4■■□□□ 1.5
SUSD3-205ENST00000617293 AIMP1Q12904 312 aaKnown RBP24.4■■□□□ 1.5
SUSD3-205ENST00000617293 DBF4Q9UBU7 674 aaPredicted RBP24.4■■□□□ 1.5
SUSD3-205ENST00000617293 NIP7Q9Y221 180 aaKnown RBP eCLIP24.4■■□□□ 1.5
SUSD3-205ENST00000617293 CARMIL3Q8ND23 1372 aa24.4■■□□□ 1.5
SUSD3-205ENST00000617293 NPHP1O15259 732 aa24.39■■□□□ 1.49
SUSD3-205ENST00000617293 COPS6Q7L5N1 327 aa24.39■■□□□ 1.49
SUSD3-205ENST00000617293 TSPYL6Q8N831 410 aa24.39■■□□□ 1.49
SUSD3-205ENST00000617293 N4BP2Q86UW6 1770 aaPredicted RBP24.39■■□□□ 1.49
SUSD3-205ENST00000617293 DPEP1P16444 411 aa24.38■■□□□ 1.49
SUSD3-205ENST00000617293 XAGE3Q8WTP9 111 aa24.38■■□□□ 1.49
SUSD3-205ENST00000617293 NRXN2Q9P2S2 1712 aa24.38■■□□□ 1.49
SUSD3-205ENST00000617293 PXDNLA1KZ92 1463 aa24.38■■□□□ 1.49
SUSD3-205ENST00000617293 NUP98P52948 1817 aa24.38■■□□□ 1.49
SUSD3-205ENST00000617293 CCDC24Q8N4L8 307 aa24.37■■□□□ 1.49
SUSD3-205ENST00000617293 GOLGB1Q14789 3259 aaKnown RBP24.37■■□□□ 1.49
SUSD3-205ENST00000617293 FANCIQ9NVI1 1328 aa24.36■■□□□ 1.49
SUSD3-205ENST00000617293 YBX3P16989 372 aaKnown RBP eCLIP24.36■■□□□ 1.49
SUSD3-205ENST00000617293 SPINK5Q9NQ38 1064 aaPredicted RBP24.36■■□□□ 1.49
SUSD3-205ENST00000617293 FAM177BA6PVY3 158 aa24.35■■□□□ 1.49
SUSD3-205ENST00000617293 GOLGA2Q08379 1002 aa24.35■■□□□ 1.49
SUSD3-205ENST00000617293 TWISTNBQ3B726 338 aaPredicted RBP24.35■■□□□ 1.49
SUSD3-205ENST00000617293 PRR5LQ6MZQ0 368 aa24.35■■□□□ 1.49
SUSD3-205ENST00000617293 NBPF5PQ86XG9 351 aaPredicted RBP24.35■■□□□ 1.49
SUSD3-205ENST00000617293 CNBD1Q8NA66 436 aa24.35■■□□□ 1.49
SUSD3-205ENST00000617293 HYPKQ9NX55 129 aa24.35■■□□□ 1.49
SUSD3-205ENST00000617293 KIAA1551Q9HCM1 1747 aa24.35■■□□□ 1.49
SUSD3-205ENST00000617293 UTRNP46939 3433 aa24.34■■□□□ 1.49
SUSD3-205ENST00000617293 CHRNA5P30532 468 aa24.34■■□□□ 1.49
SUSD3-205ENST00000617293 CCDC30Q5VVM6 783 aa24.34■■□□□ 1.49
SUSD3-205ENST00000617293 GIGYF2Q6Y7W6 1299 aaKnown RBP24.34■■□□□ 1.49
SUSD3-205ENST00000617293 CHMP4AQ9BY43 222 aa24.34■■□□□ 1.49
SUSD3-205ENST00000617293 GPTP24298 496 aa24.33■■□□□ 1.49
SUSD3-205ENST00000617293 TPTE2Q6XPS3 522 aa24.33■■□□□ 1.49
SUSD3-205ENST00000617293 KCNA3P22001 575 aa24.32■■□□□ 1.48
SUSD3-205ENST00000617293 ST5P78524 1137 aa24.32■■□□□ 1.48
SUSD3-205ENST00000617293 MYH16Q9H6N6 1097 aa24.32■■□□□ 1.48
SUSD3-205ENST00000617293 ZNF521Q96K83 1311 aa24.32■■□□□ 1.48
SUSD3-205ENST00000617293 GRIN3BO60391 1043 aa24.31■■□□□ 1.48
SUSD3-205ENST00000617293 EXOSC9Q06265 439 aaKnown RBP24.31■■□□□ 1.48
SUSD3-205ENST00000617293 BRIP1Q9BX63 1249 aa24.31■■□□□ 1.48
SUSD3-205ENST00000617293 PIM2Q9P1W9 311 aa24.31■■□□□ 1.48
SUSD3-205ENST00000617293 BCS1LQ9Y276 419 aa24.31■■□□□ 1.48
SUSD3-205ENST00000617293 TCERG1O14776 1098 aaKnown RBP24.3■■□□□ 1.48
SUSD3-205ENST00000617293 GTF2E1P29083 439 aaPredicted RBP24.3■■□□□ 1.48
SUSD3-205ENST00000617293 ANKRD13DQ6ZTN6 518 aa24.3■■□□□ 1.48
SUSD3-205ENST00000617293 C2CD5Q86YS7 1000 aa24.3■■□□□ 1.48
SUSD3-205ENST00000617293 ZNF34Q8IZ26 560 aa24.3■■□□□ 1.48
SUSD3-205ENST00000617293 PHAXQ9H814 394 aaKnown RBP24.3■■□□□ 1.48
SUSD3-205ENST00000617293 ATP10DQ9P241 1426 aa24.29■■□□□ 1.48
SUSD3-205ENST00000617293 H0YIN7 160 aa24.29■■□□□ 1.48
SUSD3-205ENST00000617293 PDE6BP35913 854 aa24.29■■□□□ 1.48
SUSD3-205ENST00000617293 HSP90AB3PQ58FF7 597 aa24.28■■□□□ 1.48
SUSD3-205ENST00000617293 PLBD2Q8NHP8 589 aa24.28■■□□□ 1.48
SUSD3-205ENST00000617293 STK31Q9BXU1 1019 aa24.28■■□□□ 1.48
SUSD3-205ENST00000617293 NYXQ9GZU5 481 aa24.28■■□□□ 1.48
SUSD3-205ENST00000617293 UBN2Q6ZU65 1347 aa24.28■■□□□ 1.48
SUSD3-205ENST00000617293 SUSD4Q5VX71 490 aa24.27■■□□□ 1.48
SUSD3-205ENST00000617293 ANKRD31Q8N7Z5 1873 aa24.27■■□□□ 1.48
SUSD3-205ENST00000617293 VAMP4O75379 141 aa24.26■■□□□ 1.47
SUSD3-205ENST00000617293 TCIRG1Q13488 830 aa24.26■■□□□ 1.47
SUSD3-205ENST00000617293 DALRD3Q5D0E6 543 aaKnown RBP24.26■■□□□ 1.47
SUSD3-205ENST00000617293 NUTM1Q86Y26 1132 aa24.26■■□□□ 1.47
SUSD3-205ENST00000617293 BRCA1P38398 1863 aaKnown RBP24.26■■□□□ 1.47
SUSD3-205ENST00000617293 PARP10Q53GL7 1025 aa24.25■■□□□ 1.47
SUSD3-205ENST00000617293 PPP1R42Q7Z4L9 355 aa24.25■■□□□ 1.47
SUSD3-205ENST00000617293 RIC3Q7Z5B4 369 aa24.25■■□□□ 1.47
SUSD3-205ENST00000617293 PDZRN3Q9UPQ7 1066 aa24.25■■□□□ 1.47
SUSD3-205ENST00000617293 SLC4A2P04920 1241 aa24.24■■□□□ 1.47
SUSD3-205ENST00000617293 ZNF622Q969S3 477 aaKnown RBP eCLIP24.24■■□□□ 1.47
SUSD3-205ENST00000617293 E9PSI1 815 aa24.23■■□□□ 1.47
SUSD3-205ENST00000617293 ERFEQ4G0M1 354 aa24.23■■□□□ 1.47
SUSD3-205ENST00000617293 CHD4Q14839 1912 aa24.22■■□□□ 1.47
SUSD3-205ENST00000617293 ANKRD36CQ5JPF3 1778 aa24.22■■□□□ 1.47
SUSD3-205ENST00000617293 YY1P25490 414 aa24.22■■□□□ 1.47
SUSD3-205ENST00000617293 UTP14AQ9BVJ6 771 aaKnown RBP24.22■■□□□ 1.47
SUSD3-205ENST00000617293 NTSR2O95665 410 aa24.21■■□□□ 1.47
SUSD3-205ENST00000617293 DDX58O95786 925 aaKnown RBP24.21■■□□□ 1.47
SUSD3-205ENST00000617293 NLRP10Q86W26 655 aa24.21■■□□□ 1.47
SUSD3-205ENST00000617293 PIAS4Q8N2W9 510 aaPredicted RBP24.21■■□□□ 1.47
SUSD3-205ENST00000617293 TTLL6Q8N841 843 aa24.21■■□□□ 1.47
SUSD3-205ENST00000617293 ZNF428Q96B54 188 aa24.21■■□□□ 1.47
SUSD3-205ENST00000617293 CDCA7LQ96GN5 454 aa24.21■■□□□ 1.47
SUSD3-205ENST00000617293 ATP5J2-PTCD1G3V325 749 aa24.2■■□□□ 1.46
SUSD3-205ENST00000617293 SLFN5Q08AF3 891 aa24.2■■□□□ 1.46
SUSD3-205ENST00000617293 DLEC1Q9Y238 1755 aa24.2■■□□□ 1.46
SUSD3-205ENST00000617293 IBTKQ9P2D0 1353 aaPredicted RBP24.19■■□□□ 1.46
SUSD3-205ENST00000617293 SRGNP10124 158 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms