RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 PRR5LQ6MZQ0 368 aa28.86■■■□□ 2.21
CBWD3-212ENST00000616550 CNBD1Q8NA66 436 aa28.86■■■□□ 2.21
CBWD3-212ENST00000616550 NIP7Q9Y221 180 aaKnown RBP eCLIP28.86■■■□□ 2.21
CBWD3-212ENST00000616550 H0YIN7 160 aa28.85■■■□□ 2.21
CBWD3-212ENST00000616550 GNAI1P63096 354 aa28.85■■■□□ 2.21
CBWD3-212ENST00000616550 KRT24Q2M2I5 525 aa28.85■■■□□ 2.21
CBWD3-212ENST00000616550 C2CD5Q86YS7 1000 aa28.85■■■□□ 2.21
CBWD3-212ENST00000616550 BRIP1Q9BX63 1249 aa28.85■■■□□ 2.21
CBWD3-212ENST00000616550 MBIPQ9NS73 344 aa28.85■■■□□ 2.21
CBWD3-212ENST00000616550 IFT57Q9NWB7 429 aa28.85■■■□□ 2.21
CBWD3-212ENST00000616550 MAP3K15Q6ZN16 1313 aa28.85■■■□□ 2.21
CBWD3-212ENST00000616550 PDE6BP35913 854 aa28.84■■■□□ 2.21
CBWD3-212ENST00000616550 ST5P78524 1137 aa28.84■■■□□ 2.21
CBWD3-212ENST00000616550 TTLL7Q6ZT98 887 aa28.84■■■□□ 2.21
CBWD3-212ENST00000616550 NBPF5PQ86XG9 351 aaPredicted RBP28.84■■■□□ 2.21
CBWD3-212ENST00000616550 ZNF784Q8NCA9 323 aaPredicted RBP28.84■■■□□ 2.21
CBWD3-212ENST00000616550 NECTIN2Q92692 538 aa28.84■■■□□ 2.21
CBWD3-212ENST00000616550 ZNF853P0CG23 659 aa28.83■■■□□ 2.21
CBWD3-212ENST00000616550 PDIA6Q15084 440 aa28.83■■■□□ 2.21
CBWD3-212ENST00000616550 CCDC24Q8N4L8 307 aa28.83■■■□□ 2.21
CBWD3-212ENST00000616550 PDZRN3Q9UPQ7 1066 aa28.83■■■□□ 2.21
CBWD3-212ENST00000616550 HOXB7P09629 217 aa28.82■■■□□ 2.2
CBWD3-212ENST00000616550 ARHGAP27Q6ZUM4 889 aa28.82■■■□□ 2.2
CBWD3-212ENST00000616550 NUP98P52948 1817 aa28.81■■■□□ 2.2
CBWD3-212ENST00000616550 ARFGEF1Q9Y6D6 1849 aa28.81■■■□□ 2.2
CBWD3-212ENST00000616550 TPTE2Q6XPS3 522 aa28.81■■■□□ 2.2
CBWD3-212ENST00000616550 ZBTB3Q9H5J0 574 aa28.81■■■□□ 2.2
CBWD3-212ENST00000616550 DUSP27Q5VZP5 1158 aa28.8■■■□□ 2.2
CBWD3-212ENST00000616550 ANKRD31Q8N7Z5 1873 aa28.8■■■□□ 2.2
CBWD3-212ENST00000616550 SENP3-EIF4A1A0A087X0R7 540 aa28.79■■■□□ 2.2
CBWD3-212ENST00000616550 ANXA1P04083 346 aa28.79■■■□□ 2.2
CBWD3-212ENST00000616550 CCDC27Q2M243 656 aa28.79■■■□□ 2.2
CBWD3-212ENST00000616550 PROSER3Q2NL68 480 aa28.79■■■□□ 2.2
CBWD3-212ENST00000616550 HDGFL1Q5TGJ6 251 aa28.79■■■□□ 2.2
CBWD3-212ENST00000616550 LRP10Q7Z4F1 713 aa28.78■■■□□ 2.2
CBWD3-212ENST00000616550 TTLL6Q8N841 843 aa28.78■■■□□ 2.2
CBWD3-212ENST00000616550 DDX21Q9NR30 783 aaKnown RBP eCLIP28.78■■■□□ 2.2
CBWD3-212ENST00000616550 FAM177BA6PVY3 158 aa28.77■■■□□ 2.2
CBWD3-212ENST00000616550 ZNF622Q969S3 477 aaKnown RBP eCLIP28.77■■■□□ 2.2
CBWD3-212ENST00000616550 DLEC1Q9Y238 1755 aa28.77■■■□□ 2.2
CBWD3-212ENST00000616550 GTF2E1P29083 439 aaPredicted RBP28.76■■■□□ 2.19
CBWD3-212ENST00000616550 GIGYF2Q6Y7W6 1299 aaKnown RBP28.76■■■□□ 2.19
CBWD3-212ENST00000616550 WWC1Q8IX03 1113 aa28.76■■■□□ 2.19
CBWD3-212ENST00000616550 FAM9BQ8IZU0 186 aa28.76■■■□□ 2.19
CBWD3-212ENST00000616550 NCBP3Q53F19 620 aaKnown RBP28.75■■■□□ 2.19
CBWD3-212ENST00000616550 COPS6Q7L5N1 327 aa28.75■■■□□ 2.19
CBWD3-212ENST00000616550 AIMP1Q12904 312 aaKnown RBP28.74■■■□□ 2.19
CBWD3-212ENST00000616550 XAGE3Q8WTP9 111 aa28.74■■■□□ 2.19
CBWD3-212ENST00000616550 NYXQ9GZU5 481 aa28.74■■■□□ 2.19
CBWD3-212ENST00000616550 CHPF2Q9P2E5 772 aa28.74■■■□□ 2.19
CBWD3-212ENST00000616550 ATP10DQ9P241 1426 aa28.74■■■□□ 2.19
CBWD3-212ENST00000616550 GPTP24298 496 aa28.73■■■□□ 2.19
CBWD3-212ENST00000616550 DBF4Q9UBU7 674 aaPredicted RBP28.73■■■□□ 2.19
CBWD3-212ENST00000616550 ELL2O00472 640 aaPredicted RBP28.71■■■□□ 2.19
CBWD3-212ENST00000616550 ZNF34Q8IZ26 560 aa28.71■■■□□ 2.19
CBWD3-212ENST00000616550 CNKSR1Q969H4 720 aa28.7■■■□□ 2.18
CBWD3-212ENST00000616550 MASTLQ96GX5 879 aa28.7■■■□□ 2.18
CBWD3-212ENST00000616550 SALL2Q9Y467 1007 aaPredicted RBP28.7■■■□□ 2.18
CBWD3-212ENST00000616550 SRGNP10124 158 aa28.69■■■□□ 2.18
CBWD3-212ENST00000616550 STYK1Q6J9G0 422 aa28.69■■■□□ 2.18
CBWD3-212ENST00000616550 HYPKQ9NX55 129 aa28.69■■■□□ 2.18
CBWD3-212ENST00000616550 PARP10Q53GL7 1025 aa28.68■■■□□ 2.18
CBWD3-212ENST00000616550 PPP1R42Q7Z4L9 355 aa28.68■■■□□ 2.18
CBWD3-212ENST00000616550 C8orf58Q8NAV2 365 aa28.68■■■□□ 2.18
CBWD3-212ENST00000616550 CHMP4AQ9BY43 222 aa28.68■■■□□ 2.18
CBWD3-212ENST00000616550 COL11A2P13942 1736 aaPredicted RBP28.68■■■□□ 2.18
CBWD3-212ENST00000616550 IL16Q14005 1332 aa28.68■■■□□ 2.18
CBWD3-212ENST00000616550 UBN2Q6ZU65 1347 aa28.68■■■□□ 2.18
CBWD3-212ENST00000616550 HSP90AB3PQ58FF7 597 aa28.67■■■□□ 2.18
CBWD3-212ENST00000616550 SUSD4Q5VX71 490 aa28.67■■■□□ 2.18
CBWD3-212ENST00000616550 NUTM1Q86Y26 1132 aa28.67■■■□□ 2.18
CBWD3-212ENST00000616550 ADCY9O60503 1353 aa28.66■■■□□ 2.18
CBWD3-212ENST00000616550 IBTKQ9P2D0 1353 aaPredicted RBP28.66■■■□□ 2.18
CBWD3-212ENST00000616550 TSR2Q969E8 191 aaKnown RBP28.66■■■□□ 2.18
CBWD3-212ENST00000616550 KLRG2A4D1S0 409 aaPredicted RBP28.65■■■□□ 2.18
CBWD3-212ENST00000616550 NPR1P16066 1061 aa28.65■■■□□ 2.18
CBWD3-212ENST00000616550 ERFEQ4G0M1 354 aa28.65■■■□□ 2.18
CBWD3-212ENST00000616550 C9orf131Q5VYM1 1079 aa28.64■■■□□ 2.18
CBWD3-212ENST00000616550 ANKRD13DQ6ZTN6 518 aa28.64■■■□□ 2.18
CBWD3-212ENST00000616550 WDR63Q8IWG1 891 aa28.64■■■□□ 2.18
CBWD3-212ENST00000616550 PLBD2Q8NHP8 589 aa28.64■■■□□ 2.18
CBWD3-212ENST00000616550 TCIRG1Q13488 830 aa28.63■■■□□ 2.17
CBWD3-212ENST00000616550 CCDC30Q5VVM6 783 aa28.63■■■□□ 2.17
CBWD3-212ENST00000616550 ZNF219Q9P2Y4 722 aaPredicted RBP28.63■■■□□ 2.17
CBWD3-212ENST00000616550 C21orf2O43822 256 aa28.62■■■□□ 2.17
CBWD3-212ENST00000616550 UTP14AQ9BVJ6 771 aaKnown RBP28.62■■■□□ 2.17
CBWD3-212ENST00000616550 CACNA1SQ13698 1873 aa28.61■■■□□ 2.17
CBWD3-212ENST00000616550 ANKRD36CQ5JPF3 1778 aa28.61■■■□□ 2.17
CBWD3-212ENST00000616550 NTSR2O95665 410 aa28.61■■■□□ 2.17
CBWD3-212ENST00000616550 PRPF40BQ6NWY9 871 aaKnown RBP28.61■■■□□ 2.17
CBWD3-212ENST00000616550 TSPYL6Q8N831 410 aa28.61■■■□□ 2.17
CBWD3-212ENST00000616550 ZNF526Q8TF50 670 aaPredicted RBP28.61■■■□□ 2.17
CBWD3-212ENST00000616550 GPBP1L1Q9HC44 474 aaPredicted RBP28.61■■■□□ 2.17
CBWD3-212ENST00000616550 SLX4Q8IY92 1834 aa28.61■■■□□ 2.17
CBWD3-212ENST00000616550 SBF1O95248 1867 aa28.61■■■□□ 2.17
CBWD3-212ENST00000616550 ABCC12Q96J65 1359 aa28.61■■■□□ 2.17
CBWD3-212ENST00000616550 RNF181Q9P0P0 153 aa28.6■■■□□ 2.17
CBWD3-212ENST00000616550 ALDH1B1P30837 517 aa28.59■■■□□ 2.17
CBWD3-212ENST00000616550 RASSF7Q02833 373 aa28.59■■■□□ 2.17
CBWD3-212ENST00000616550 SOGA3Q5TF21 947 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms