RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 ZNF652Q9Y2D9 606 aa13.63□□□□□ -0.23
LINC00649-217ENST00000616030 ERVV-1B6SEH8 477 aa13.62□□□□□ -0.23
LINC00649-217ENST00000616030 CENPBP07199 599 aaPredicted RBP13.62□□□□□ -0.23
LINC00649-217ENST00000616030 HOXB7P09629 217 aa13.62□□□□□ -0.23
LINC00649-217ENST00000616030 NPM2Q86SE8 214 aaKnown RBP13.62□□□□□ -0.23
LINC00649-217ENST00000616030 ZNF853P0CG23 659 aa13.61□□□□□ -0.23
LINC00649-217ENST00000616030 PRR5LQ6MZQ0 368 aa13.61□□□□□ -0.23
LINC00649-217ENST00000616030 BRIP1Q9BX63 1249 aa13.61□□□□□ -0.23
LINC00649-217ENST00000616030 SBF1O95248 1867 aa13.61□□□□□ -0.23
LINC00649-217ENST00000616030 KLRG2A4D1S0 409 aaPredicted RBP13.6□□□□□ -0.23
LINC00649-217ENST00000616030 PIP4K2AP48426 406 aaPredicted RBP13.6□□□□□ -0.23
LINC00649-217ENST00000616030 PDIA6Q15084 440 aa13.6□□□□□ -0.23
LINC00649-217ENST00000616030 CFAP44Q96MT7 982 aa13.6□□□□□ -0.23
LINC00649-217ENST00000616030 SETDB2Q96T68 719 aa13.6□□□□□ -0.23
LINC00649-217ENST00000616030 BCS1LQ9Y276 419 aa13.6□□□□□ -0.23
LINC00649-217ENST00000616030 RRP7AQ9Y3A4 280 aaKnown RBP13.6□□□□□ -0.23
LINC00649-217ENST00000616030 ANKRD36CQ5JPF3 1778 aa13.6□□□□□ -0.23
LINC00649-217ENST00000616030 MAP3K15Q6ZN16 1313 aa13.6□□□□□ -0.23
LINC00649-217ENST00000616030 CHRNA5P30532 468 aa13.59□□□□□ -0.23
LINC00649-217ENST00000616030 CCDC27Q2M243 656 aa13.59□□□□□ -0.23
LINC00649-217ENST00000616030 DALRD3Q5D0E6 543 aaKnown RBP13.59□□□□□ -0.23
LINC00649-217ENST00000616030 CNBD1Q8NA66 436 aa13.59□□□□□ -0.23
LINC00649-217ENST00000616030 ZNF330Q9Y3S2 320 aaPredicted RBP13.59□□□□□ -0.23
LINC00649-217ENST00000616030 PDE6BP35913 854 aa13.58□□□□□ -0.24
LINC00649-217ENST00000616030 FER1L6Q2WGJ9 1857 aa13.58□□□□□ -0.24
LINC00649-217ENST00000616030 TNRC6CQ9HCJ0 1690 aaKnown RBP13.57□□□□□ -0.24
LINC00649-217ENST00000616030 APAF1O14727 1248 aa13.57□□□□□ -0.24
LINC00649-217ENST00000616030 CALD1Q05682 793 aaKnown RBP13.57□□□□□ -0.24
LINC00649-217ENST00000616030 HLFQ16534 295 aa13.57□□□□□ -0.24
LINC00649-217ENST00000616030 BICDL1Q6ZP65 573 aa13.57□□□□□ -0.24
LINC00649-217ENST00000616030 IFT57Q9NWB7 429 aa13.57□□□□□ -0.24
LINC00649-217ENST00000616030 H0YIN7 160 aa13.56□□□□□ -0.24
LINC00649-217ENST00000616030 ST5P78524 1137 aa13.56□□□□□ -0.24
LINC00649-217ENST00000616030 HNRNPUQ00839 825 aaKnown RBP eCLIP13.56□□□□□ -0.24
LINC00649-217ENST00000616030 NEUROD2Q15784 382 aa13.56□□□□□ -0.24
LINC00649-217ENST00000616030 GIGYF2Q6Y7W6 1299 aaKnown RBP13.56□□□□□ -0.24
LINC00649-217ENST00000616030 ZC3H4Q9UPT8 1303 aaKnown RBP13.56□□□□□ -0.24
LINC00649-217ENST00000616030 SRGNP10124 158 aa13.55□□□□□ -0.24
LINC00649-217ENST00000616030 STYK1Q6J9G0 422 aa13.55□□□□□ -0.24
LINC00649-217ENST00000616030 TTLL7Q6ZT98 887 aa13.55□□□□□ -0.24
LINC00649-217ENST00000616030 C2CD5Q86YS7 1000 aa13.55□□□□□ -0.24
LINC00649-217ENST00000616030 TTLL6Q8N841 843 aa13.55□□□□□ -0.24
LINC00649-217ENST00000616030 DDX21Q9NR30 783 aaKnown RBP eCLIP13.55□□□□□ -0.24
LINC00649-217ENST00000616030 NIP7Q9Y221 180 aaKnown RBP eCLIP13.55□□□□□ -0.24
LINC00649-217ENST00000616030 UBN2Q6ZU65 1347 aa13.55□□□□□ -0.24
LINC00649-217ENST00000616030 GNAI1P63096 354 aa13.54□□□□□ -0.24
LINC00649-217ENST00000616030 CRY2Q49AN0 593 aa13.54□□□□□ -0.24
LINC00649-217ENST00000616030 TPTE2Q6XPS3 522 aa13.54□□□□□ -0.24
LINC00649-217ENST00000616030 KIF6Q6ZMV9 814 aa13.54□□□□□ -0.24
LINC00649-217ENST00000616030 NBPF5PQ86XG9 351 aaPredicted RBP13.54□□□□□ -0.24
LINC00649-217ENST00000616030 ZNF34Q8IZ26 560 aa13.54□□□□□ -0.24
LINC00649-217ENST00000616030 MBIPQ9NS73 344 aa13.54□□□□□ -0.24
LINC00649-217ENST00000616030 WWC3Q9ULE0 1092 aa13.54□□□□□ -0.24
LINC00649-217ENST00000616030 SLX4Q8IY92 1834 aa13.54□□□□□ -0.24
LINC00649-217ENST00000616030 RNF123Q5XPI4 1314 aa13.54□□□□□ -0.24
LINC00649-217ENST00000616030 LTBP3Q9NS15 1303 aa13.54□□□□□ -0.24
LINC00649-217ENST00000616030 DICER1Q9UPY3 1922 aaKnown RBP13.54□□□□□ -0.24
LINC00649-217ENST00000616030 MYL6BP14649 208 aa13.53□□□□□ -0.24
LINC00649-217ENST00000616030 KRT24Q2M2I5 525 aa13.53□□□□□ -0.24
LINC00649-217ENST00000616030 PROSER3Q2NL68 480 aa13.53□□□□□ -0.24
LINC00649-217ENST00000616030 NYXQ9GZU5 481 aa13.53□□□□□ -0.24
LINC00649-217ENST00000616030 IL16Q14005 1332 aa13.53□□□□□ -0.24
LINC00649-217ENST00000616030 ABCC12Q96J65 1359 aa13.53□□□□□ -0.24
LINC00649-217ENST00000616030 SNED1Q8TER0 1413 aa13.53□□□□□ -0.24
LINC00649-217ENST00000616030 TIAM2Q8IVF5 1701 aa13.53□□□□□ -0.24
LINC00649-217ENST00000616030 CACNA1SQ13698 1873 aa13.53□□□□□ -0.24
LINC00649-217ENST00000616030 PARP10Q53GL7 1025 aa13.52□□□□□ -0.25
LINC00649-217ENST00000616030 MASTLQ96GX5 879 aa13.52□□□□□ -0.25
LINC00649-217ENST00000616030 ZBED9Q6R2W3 1325 aa13.51□□□□□ -0.25
LINC00649-217ENST00000616030 NFKBIEO00221 500 aa13.51□□□□□ -0.25
LINC00649-217ENST00000616030 NTSR2O95665 410 aa13.51□□□□□ -0.25
LINC00649-217ENST00000616030 HDGFL1Q5TGJ6 251 aa13.51□□□□□ -0.25
LINC00649-217ENST00000616030 ARHGAP27Q6ZUM4 889 aa13.51□□□□□ -0.25
LINC00649-217ENST00000616030 C7orf43Q8WVR3 580 aa13.51□□□□□ -0.25
LINC00649-217ENST00000616030 CNKSR1Q969H4 720 aa13.51□□□□□ -0.25
LINC00649-217ENST00000616030 DBF4Q9UBU7 674 aaPredicted RBP13.51□□□□□ -0.25
LINC00649-217ENST00000616030 LAMB2P55268 1798 aa13.5□□□□□ -0.25
LINC00649-217ENST00000616030 NPR1P16066 1061 aa13.5□□□□□ -0.25
LINC00649-217ENST00000616030 EIF2S2P20042 333 aaKnown RBP13.5□□□□□ -0.25
LINC00649-217ENST00000616030 DUSP27Q5VZP5 1158 aa13.5□□□□□ -0.25
LINC00649-217ENST00000616030 WWC1Q8IX03 1113 aa13.5□□□□□ -0.25
LINC00649-217ENST00000616030 NGEFQ8N5V2 710 aa13.5□□□□□ -0.25
LINC00649-217ENST00000616030 ZBTB3Q9H5J0 574 aa13.5□□□□□ -0.25
LINC00649-217ENST00000616030 CHPF2Q9P2E5 772 aa13.5□□□□□ -0.25
LINC00649-217ENST00000616030 CCDC88AQ3V6T2 1871 aa13.49□□□□□ -0.25
LINC00649-217ENST00000616030 HSP90AB3PQ58FF7 597 aa13.49□□□□□ -0.25
LINC00649-217ENST00000616030 SOGA3Q5TF21 947 aa13.49□□□□□ -0.25
LINC00649-217ENST00000616030 C9orf131Q5VYM1 1079 aa13.49□□□□□ -0.25
LINC00649-217ENST00000616030 PRPF40BQ6NWY9 871 aaKnown RBP13.49□□□□□ -0.25
LINC00649-217ENST00000616030 CHMP4AQ9BY43 222 aa13.49□□□□□ -0.25
LINC00649-217ENST00000616030 GPBP1L1Q9HC44 474 aaPredicted RBP13.49□□□□□ -0.25
LINC00649-217ENST00000616030 ANXA1P04083 346 aa13.48□□□□□ -0.25
LINC00649-217ENST00000616030 LMNB1P20700 586 aa13.48□□□□□ -0.25
LINC00649-217ENST00000616030 HOXA10P31260 410 aaPredicted RBP13.48□□□□□ -0.25
LINC00649-217ENST00000616030 PRELPP51888 382 aa13.48□□□□□ -0.25
LINC00649-217ENST00000616030 C1QTNF8P60827 252 aa13.48□□□□□ -0.25
LINC00649-217ENST00000616030 SLC10A5Q5PT55 438 aa13.48□□□□□ -0.25
LINC00649-217ENST00000616030 SUSD4Q5VX71 490 aa13.48□□□□□ -0.25
LINC00649-217ENST00000616030 COPS6Q7L5N1 327 aa13.48□□□□□ -0.25
LINC00649-217ENST00000616030 PPP1R42Q7Z4L9 355 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms