RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 MTUS1Q9ULD2 1270 aa10.69□□□□□ -0.7
COL12A1-211ENST00000615798 CCT4P50991 539 aaKnown RBP10.69□□□□□ -0.7
COL12A1-211ENST00000615798 MAP7D1Q3KQU3 841 aa10.69□□□□□ -0.7
COL12A1-211ENST00000615798 MTHFSP49914 203 aa10.68□□□□□ -0.7
COL12A1-211ENST00000615798 ALS2CR12Q96Q35 445 aa10.68□□□□□ -0.7
COL12A1-211ENST00000615798 PIK3C2GO75747 1445 aa10.68□□□□□ -0.7
COL12A1-211ENST00000615798 PAFAH1B1P43034 410 aa10.68□□□□□ -0.7
COL12A1-211ENST00000615798 NUF2Q9BZD4 464 aa10.68□□□□□ -0.7
COL12A1-211ENST00000615798 VIMP08670 466 aaKnown RBP10.68□□□□□ -0.7
COL12A1-211ENST00000615798 PPP1R14CQ8TAE6 165 aa10.68□□□□□ -0.7
COL12A1-211ENST00000615798 HOMER2Q9NSB8 354 aa10.68□□□□□ -0.7
COL12A1-211ENST00000615798 GIMAP4Q9NUV9 329 aa10.68□□□□□ -0.7
COL12A1-211ENST00000615798 SPECC1Q5M775 1068 aa10.68□□□□□ -0.7
COL12A1-211ENST00000615798 XAB2Q9HCS7 855 aaKnown RBP10.68□□□□□ -0.7
COL12A1-211ENST00000615798 VPS41P49754 854 aa10.68□□□□□ -0.7
COL12A1-211ENST00000615798 RPAP2Q8IXW5 612 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-211ENST00000615798 MRFAP1L1Q96HT8 127 aa10.68□□□□□ -0.7
COL12A1-211ENST00000615798 ARFGAP3Q9NP61 516 aa10.68□□□□□ -0.7
COL12A1-211ENST00000615798 SFPQP23246 707 aaKnown RBP eCLIP10.67□□□□□ -0.7
COL12A1-211ENST00000615798 TEFQ10587 303 aa10.67□□□□□ -0.7
COL12A1-211ENST00000615798 WWC2Q6AWC2 1192 aa10.67□□□□□ -0.7
COL12A1-211ENST00000615798 FRAT2O75474 233 aaPredicted RBP10.67□□□□□ -0.7
COL12A1-211ENST00000615798 CTDP1Q9Y5B0 961 aaPredicted RBP10.67□□□□□ -0.7
COL12A1-211ENST00000615798 CCDC171Q6TFL3 1326 aa10.67□□□□□ -0.7
COL12A1-211ENST00000615798 ZBTB16Q05516 673 aa10.67□□□□□ -0.7
COL12A1-211ENST00000615798 RRP7AQ9Y3A4 280 aaKnown RBP10.67□□□□□ -0.7
COL12A1-211ENST00000615798 PPFIA3O75145 1194 aa10.67□□□□□ -0.7
COL12A1-211ENST00000615798 APBB1IPQ7Z5R6 666 aaPredicted RBP10.67□□□□□ -0.7
COL12A1-211ENST00000615798 LUC7L3O95232 432 aaKnown RBP10.67□□□□□ -0.7
COL12A1-211ENST00000615798 C1orf141Q5JVX7 400 aa10.67□□□□□ -0.7
COL12A1-211ENST00000615798 SLC4A10Q6U841 1118 aa10.67□□□□□ -0.7
COL12A1-211ENST00000615798 CALCOCO2Q13137 446 aa10.67□□□□□ -0.7
COL12A1-211ENST00000615798 PSMC4P43686 418 aa10.67□□□□□ -0.7
COL12A1-211ENST00000615798 NLRP5P59047 1200 aa10.67□□□□□ -0.7
COL12A1-211ENST00000615798 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.67□□□□□ -0.7
COL12A1-211ENST00000615798 ZFXP17010 805 aaPredicted RBP10.67□□□□□ -0.7
COL12A1-211ENST00000615798 SPA17Q15506 151 aa10.67□□□□□ -0.7
COL12A1-211ENST00000615798 SMC1BQ8NDV3 1235 aa10.67□□□□□ -0.7
COL12A1-211ENST00000615798 ERICH2A1L162 156 aa10.66□□□□□ -0.7
COL12A1-211ENST00000615798 CEP57L1Q8IYX8 460 aa10.66□□□□□ -0.7
COL12A1-211ENST00000615798 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.66□□□□□ -0.7
COL12A1-211ENST00000615798 NUP153P49790 1475 aaKnown RBP10.66□□□□□ -0.7
COL12A1-211ENST00000615798 POTEJP0CG39 1038 aa10.66□□□□□ -0.7
COL12A1-211ENST00000615798 TRIM60Q495X7 471 aa10.66□□□□□ -0.7
COL12A1-211ENST00000615798 CCDC30Q5VVM6 783 aa10.66□□□□□ -0.7
COL12A1-211ENST00000615798 NBPF11Q86T75 865 aa10.66□□□□□ -0.7
COL12A1-211ENST00000615798 TSNARE1Q96NA8 513 aa10.66□□□□□ -0.7
COL12A1-211ENST00000615798 PRAG1Q86YV5 1406 aa10.66□□□□□ -0.7
COL12A1-211ENST00000615798 DIXDC1Q155Q3 683 aa10.66□□□□□ -0.7
COL12A1-211ENST00000615798 RTEL1-TNFRSF6BF6WH68 1400 aa10.66□□□□□ -0.7
COL12A1-211ENST00000615798 TAF7Q15545 349 aaPredicted RBP10.66□□□□□ -0.7
COL12A1-211ENST00000615798 THEGQ9P2T0 379 aa10.66□□□□□ -0.7
COL12A1-211ENST00000615798 IKBKGQ9Y6K9 419 aa10.66□□□□□ -0.7
COL12A1-211ENST00000615798 FOSBP53539 338 aa10.66□□□□□ -0.7
COL12A1-211ENST00000615798 TUBB4BP68371 445 aa10.66□□□□□ -0.7
COL12A1-211ENST00000615798 SRRTQ9BXP5 876 aaKnown RBP10.66□□□□□ -0.7
COL12A1-211ENST00000615798 SERPINI2O75830 405 aa10.66□□□□□ -0.7
COL12A1-211ENST00000615798 CAPN2P17655 700 aa10.66□□□□□ -0.7
COL12A1-211ENST00000615798 LRRC45Q96CN5 670 aa10.66□□□□□ -0.7
COL12A1-211ENST00000615798 ANKRD1Q15327 319 aa10.65□□□□□ -0.7
COL12A1-211ENST00000615798 SPATS2Q86XZ4 545 aaKnown RBP10.65□□□□□ -0.7
COL12A1-211ENST00000615798 ERCC3P19447 782 aa10.65□□□□□ -0.7
COL12A1-211ENST00000615798 A0A1W2PRG0 241 aa10.65□□□□□ -0.7
COL12A1-211ENST00000615798 PLB1Q6P1J6 1458 aa10.65□□□□□ -0.7
COL12A1-211ENST00000615798 CCDC152Q4G0S7 254 aa10.65□□□□□ -0.7
COL12A1-211ENST00000615798 TPX2Q9ULW0 747 aaKnown RBP10.65□□□□□ -0.7
COL12A1-211ENST00000615798 CCDC178Q5BJE1 867 aa10.65□□□□□ -0.7
COL12A1-211ENST00000615798 ATRIPQ8WXE1 791 aa10.65□□□□□ -0.7
COL12A1-211ENST00000615798 VCX3AQ9NNX9 186 aa10.65□□□□□ -0.7
COL12A1-211ENST00000615798 LCA5Q86VQ0 697 aa10.65□□□□□ -0.7
COL12A1-211ENST00000615798 NUTM1Q86Y26 1132 aa10.65□□□□□ -0.7
COL12A1-211ENST00000615798 RLBP1P12271 317 aa10.65□□□□□ -0.7
COL12A1-211ENST00000615798 PALMDQ9NP74 551 aa10.65□□□□□ -0.7
COL12A1-211ENST00000615798 URI1O94763 535 aaPredicted RBP10.65□□□□□ -0.71
COL12A1-211ENST00000615798 ANKRD36BQ8N2N9 1353 aa10.65□□□□□ -0.71
COL12A1-211ENST00000615798 CCDC129Q6ZRS4 1044 aa10.65□□□□□ -0.71
COL12A1-211ENST00000615798 TRIM7Q9C029 511 aa10.65□□□□□ -0.71
COL12A1-211ENST00000615798 SLC4A8Q2Y0W8 1093 aa10.64□□□□□ -0.71
COL12A1-211ENST00000615798 FAF1Q9UNN5 650 aaPredicted RBP10.64□□□□□ -0.71
COL12A1-211ENST00000615798 CKAP4Q07065 602 aaKnown RBP10.64□□□□□ -0.71
COL12A1-211ENST00000615798 SPTY2D1Q68D10 685 aaPredicted RBP10.64□□□□□ -0.71
COL12A1-211ENST00000615798 BTN2A1Q7KYR7 527 aa10.64□□□□□ -0.71
COL12A1-211ENST00000615798 CETN3O15182 167 aa10.64□□□□□ -0.71
COL12A1-211ENST00000615798 BLVRAP53004 296 aa10.64□□□□□ -0.71
COL12A1-211ENST00000615798 CCDC170Q8IYT3 715 aa10.64□□□□□ -0.71
COL12A1-211ENST00000615798 ADGRL1O94910 1474 aa10.64□□□□□ -0.71
COL12A1-211ENST00000615798 CNTROBQ8N137 903 aa10.64□□□□□ -0.71
COL12A1-211ENST00000615798 OGFRQ9NZT2 677 aa10.64□□□□□ -0.71
COL12A1-211ENST00000615798 PBRM1Q86U86 1689 aa10.64□□□□□ -0.71
COL12A1-211ENST00000615798 MINK1Q8N4C8 1332 aaPredicted RBP10.64□□□□□ -0.71
COL12A1-211ENST00000615798 HLTFQ14527 1009 aaKnown RBP eCLIP10.64□□□□□ -0.71
COL12A1-211ENST00000615798 IFIT2P09913 472 aaKnown RBP10.63□□□□□ -0.71
COL12A1-211ENST00000615798 C9orf78Q9NZ63 289 aaPredicted RBP10.63□□□□□ -0.71
COL12A1-211ENST00000615798 PANK1Q8TE04 598 aa10.63□□□□□ -0.71
COL12A1-211ENST00000615798 CFAP70Q5T0N1 1121 aa10.63□□□□□ -0.71
COL12A1-211ENST00000615798 K7ELQ4 463 aaPredicted RBP10.63□□□□□ -0.71
COL12A1-211ENST00000615798 ATICP31939 592 aa10.63□□□□□ -0.71
COL12A1-211ENST00000615798 NSD3Q9BZ95 1437 aa10.63□□□□□ -0.71
COL12A1-211ENST00000615798 PDCD2Q16342 344 aaPredicted RBP10.63□□□□□ -0.71
COL12A1-211ENST00000615798 GSDMDP57764 484 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms