RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 BABAM1Q9NWV8 329 aa29.86■■■□□ 2.37
FAM228B-208ENST00000613899 CCDC146Q8IYE0 955 aa29.85■■■□□ 2.37
FAM228B-208ENST00000613899 CCDC24Q8N4L8 307 aa29.85■■■□□ 2.37
FAM228B-208ENST00000613899 RUNDC1Q96C34 613 aa29.85■■■□□ 2.37
FAM228B-208ENST00000613899 RNF181Q9P0P0 153 aa29.85■■■□□ 2.37
FAM228B-208ENST00000613899 ZNF622Q969S3 477 aaKnown RBP eCLIP29.84■■■□□ 2.37
FAM228B-208ENST00000613899 NIP7Q9Y221 180 aaKnown RBP eCLIP29.84■■■□□ 2.37
FAM228B-208ENST00000613899 ERBB4Q15303 1308 aa29.83■■■□□ 2.37
FAM228B-208ENST00000613899 ZEB1P37275 1124 aaPredicted RBP29.83■■■□□ 2.37
FAM228B-208ENST00000613899 ARFGEF2Q9Y6D5 1785 aa29.82■■■□□ 2.36
FAM228B-208ENST00000613899 RRP7AQ9Y3A4 280 aaKnown RBP29.82■■■□□ 2.36
FAM228B-208ENST00000613899 NUP98P52948 1817 aa29.82■■■□□ 2.36
FAM228B-208ENST00000613899 KIF3CO14782 793 aa29.81■■■□□ 2.36
FAM228B-208ENST00000613899 RASSF7Q02833 373 aa29.81■■■□□ 2.36
FAM228B-208ENST00000613899 CACNA1SQ13698 1873 aa29.8■■■□□ 2.36
FAM228B-208ENST00000613899 ERVV-1B6SEH8 477 aa29.8■■■□□ 2.36
FAM228B-208ENST00000613899 NEUROD2Q15784 382 aa29.8■■■□□ 2.36
FAM228B-208ENST00000613899 TPTE2Q6XPS3 522 aa29.8■■■□□ 2.36
FAM228B-208ENST00000613899 KIF6Q6ZMV9 814 aa29.8■■■□□ 2.36
FAM228B-208ENST00000613899 NGEFQ8N5V2 710 aa29.8■■■□□ 2.36
FAM228B-208ENST00000613899 MAP3K15Q6ZN16 1313 aa29.79■■■□□ 2.36
FAM228B-208ENST00000613899 ZC3H4Q9UPT8 1303 aaKnown RBP29.79■■■□□ 2.36
FAM228B-208ENST00000613899 HLFQ16534 295 aa29.79■■■□□ 2.36
FAM228B-208ENST00000613899 STYK1Q6J9G0 422 aa29.79■■■□□ 2.36
FAM228B-208ENST00000613899 CNKSR1Q969H4 720 aa29.79■■■□□ 2.36
FAM228B-208ENST00000613899 ADAMTS8Q9UP79 889 aa29.79■■■□□ 2.36
FAM228B-208ENST00000613899 SRGNP10124 158 aa29.78■■■□□ 2.36
FAM228B-208ENST00000613899 MYL6BP14649 208 aa29.78■■■□□ 2.36
FAM228B-208ENST00000613899 LMNB1P20700 586 aa29.78■■■□□ 2.36
FAM228B-208ENST00000613899 MASTLQ96GX5 879 aa29.78■■■□□ 2.36
FAM228B-208ENST00000613899 TIAM2Q8IVF5 1701 aa29.76■■■□□ 2.36
FAM228B-208ENST00000613899 FER1L6Q2WGJ9 1857 aa29.76■■■□□ 2.36
FAM228B-208ENST00000613899 CCDC88AQ3V6T2 1871 aa29.76■■■□□ 2.36
FAM228B-208ENST00000613899 KDM2BQ8NHM5 1336 aa29.76■■■□□ 2.36
FAM228B-208ENST00000613899 TNRC6CQ9HCJ0 1690 aaKnown RBP29.76■■■□□ 2.35
FAM228B-208ENST00000613899 SLX4Q8IY92 1834 aa29.75■■■□□ 2.35
FAM228B-208ENST00000613899 NFKBIEO00221 500 aa29.74■■■□□ 2.35
FAM228B-208ENST00000613899 TTLL7Q6ZT98 887 aa29.74■■■□□ 2.35
FAM228B-208ENST00000613899 TRIM35Q9UPQ4 493 aa29.74■■■□□ 2.35
FAM228B-208ENST00000613899 C21orf2O43822 256 aa29.73■■■□□ 2.35
FAM228B-208ENST00000613899 PRPF40BQ6NWY9 871 aaKnown RBP29.73■■■□□ 2.35
FAM228B-208ENST00000613899 NYXQ9GZU5 481 aa29.73■■■□□ 2.35
FAM228B-208ENST00000613899 NMRK2Q9NPI5 230 aa29.73■■■□□ 2.35
FAM228B-208ENST00000613899 FAM177BA6PVY3 158 aa29.72■■■□□ 2.35
FAM228B-208ENST00000613899 EIF2S2P20042 333 aaKnown RBP29.72■■■□□ 2.35
FAM228B-208ENST00000613899 GTF2E1P29083 439 aaPredicted RBP29.72■■■□□ 2.35
FAM228B-208ENST00000613899 SOGA3Q5TF21 947 aa29.72■■■□□ 2.35
FAM228B-208ENST00000613899 ZBTB3Q9H5J0 574 aa29.72■■■□□ 2.35
FAM228B-208ENST00000613899 IBTKQ9P2D0 1353 aaPredicted RBP29.72■■■□□ 2.35
FAM228B-208ENST00000613899 KLRG2A4D1S0 409 aaPredicted RBP29.71■■■□□ 2.35
FAM228B-208ENST00000613899 CHL1O00533 1208 aa29.71■■■□□ 2.35
FAM228B-208ENST00000613899 NPR1P16066 1061 aa29.71■■■□□ 2.35
FAM228B-208ENST00000613899 ZNF219Q9P2Y4 722 aaPredicted RBP29.71■■■□□ 2.35
FAM228B-208ENST00000613899 TOMM70O94826 608 aa29.7■■■□□ 2.35
FAM228B-208ENST00000613899 DICER1Q9UPY3 1922 aaKnown RBP29.7■■■□□ 2.34
FAM228B-208ENST00000613899 PRELPP51888 382 aa29.69■■■□□ 2.34
FAM228B-208ENST00000613899 LTBP3Q9NS15 1303 aa29.69■■■□□ 2.34
FAM228B-208ENST00000613899 HSPA6P17066 643 aa29.68■■■□□ 2.34
FAM228B-208ENST00000613899 GIGYF2Q6Y7W6 1299 aaKnown RBP29.68■■■□□ 2.34
FAM228B-208ENST00000613899 LRP10Q7Z4F1 713 aa29.68■■■□□ 2.34
FAM228B-208ENST00000613899 LAS1LQ9Y4W2 734 aaKnown RBP29.68■■■□□ 2.34
FAM228B-208ENST00000613899 PDIA6Q15084 440 aa29.67■■■□□ 2.34
FAM228B-208ENST00000613899 TAOK3Q9H2K8 898 aa29.67■■■□□ 2.34
FAM228B-208ENST00000613899 RIC1Q4ADV7 1423 aa29.67■■■□□ 2.34
FAM228B-208ENST00000613899 ABCC12Q96J65 1359 aa29.66■■■□□ 2.34
FAM228B-208ENST00000613899 C16orf71Q8IYS4 520 aaPredicted RBP29.66■■■□□ 2.34
FAM228B-208ENST00000613899 UBN2Q6ZU65 1347 aa29.66■■■□□ 2.34
FAM228B-208ENST00000613899 GPTP24298 496 aa29.65■■■□□ 2.34
FAM228B-208ENST00000613899 ANKRD36CQ5JPF3 1778 aa29.64■■■□□ 2.34
FAM228B-208ENST00000613899 PROSER3Q2NL68 480 aa29.64■■■□□ 2.34
FAM228B-208ENST00000613899 NUTM1Q86Y26 1132 aa29.64■■■□□ 2.34
FAM228B-208ENST00000613899 ZNF34Q8IZ26 560 aa29.64■■■□□ 2.34
FAM228B-208ENST00000613899 GLTPD2A6NH11 291 aa29.63■■■□□ 2.33
FAM228B-208ENST00000613899 HOXB7P09629 217 aa29.63■■■□□ 2.33
FAM228B-208ENST00000613899 CFAP44Q96MT7 982 aa29.63■■■□□ 2.33
FAM228B-208ENST00000613899 ANXA1P04083 346 aa29.62■■■□□ 2.33
FAM228B-208ENST00000613899 ALDH1B1P30837 517 aa29.62■■■□□ 2.33
FAM228B-208ENST00000613899 PARP10Q53GL7 1025 aa29.62■■■□□ 2.33
FAM228B-208ENST00000613899 CCDC93Q567U6 631 aa29.62■■■□□ 2.33
FAM228B-208ENST00000613899 RBM46Q8TBY0 533 aaKnown RBP29.62■■■□□ 2.33
FAM228B-208ENST00000613899 NECTIN2Q92692 538 aa29.62■■■□□ 2.33
FAM228B-208ENST00000613899 APAF1O14727 1248 aa29.61■■■□□ 2.33
FAM228B-208ENST00000613899 KRT24Q2M2I5 525 aa29.61■■■□□ 2.33
FAM228B-208ENST00000613899 CRY2Q49AN0 593 aa29.61■■■□□ 2.33
FAM228B-208ENST00000613899 ERFEQ4G0M1 354 aa29.61■■■□□ 2.33
FAM228B-208ENST00000613899 SUSD4Q5VX71 490 aa29.61■■■□□ 2.33
FAM228B-208ENST00000613899 PPP1R42Q7Z4L9 355 aa29.61■■■□□ 2.33
FAM228B-208ENST00000613899 C7orf43Q8WVR3 580 aa29.61■■■□□ 2.33
FAM228B-208ENST00000613899 RRAGCQ9HB90 399 aa29.61■■■□□ 2.33
FAM228B-208ENST00000613899 DDX21Q9NR30 783 aaKnown RBP eCLIP29.61■■■□□ 2.33
FAM228B-208ENST00000613899 CALD1Q05682 793 aaKnown RBP29.6■■■□□ 2.33
FAM228B-208ENST00000613899 NTSR2O95665 410 aa29.59■■■□□ 2.33
FAM228B-208ENST00000613899 HSP90AB3PQ58FF7 597 aa29.59■■■□□ 2.33
FAM228B-208ENST00000613899 HDGFL1Q5TGJ6 251 aa29.59■■■□□ 2.33
FAM228B-208ENST00000613899 COPS6Q7L5N1 327 aa29.59■■■□□ 2.33
FAM228B-208ENST00000613899 CEP350Q5VT06 3117 aa29.58■■■□□ 2.33
FAM228B-208ENST00000613899 DPY19L2Q6NUT2 758 aa29.58■■■□□ 2.33
FAM228B-208ENST00000613899 XAGE3Q8WTP9 111 aa29.58■■■□□ 2.33
FAM228B-208ENST00000613899 WDR90Q96KV7 1748 aa29.57■■■□□ 2.32
FAM228B-208ENST00000613899 RNF123Q5XPI4 1314 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms