RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 CLUAP1Q96AJ1 413 aa16.32■□□□□ 0.2
PRKN-210ENST00000612540 AK7Q96M32 723 aa16.32■□□□□ 0.2
PRKN-210ENST00000612540 API5Q9BZZ5 524 aaKnown RBP16.32■□□□□ 0.2
PRKN-210ENST00000612540 CNTNAP4Q9C0A0 1308 aa16.32■□□□□ 0.2
PRKN-210ENST00000612540 TFCP2L1Q9NZI6 479 aa16.32■□□□□ 0.2
PRKN-210ENST00000612540 TNNQ9UQP3 1299 aa16.32■□□□□ 0.2
PRKN-210ENST00000612540 DDX58O95786 925 aaKnown RBP16.31■□□□□ 0.2
PRKN-210ENST00000612540 INTS5Q6P9B9 1019 aaKnown RBP16.31■□□□□ 0.2
PRKN-210ENST00000612540 GNPATO15228 680 aa16.3■□□□□ 0.2
PRKN-210ENST00000612540 MS4A1P11836 297 aa16.3■□□□□ 0.2
PRKN-210ENST00000612540 TRIM27P14373 513 aa16.3■□□□□ 0.2
PRKN-210ENST00000612540 COPS6Q7L5N1 327 aa16.3■□□□□ 0.2
PRKN-210ENST00000612540 KLHL34Q8N239 644 aa16.3■□□□□ 0.2
PRKN-210ENST00000612540 ARFGEF2Q9Y6D5 1785 aa16.29■□□□□ 0.2
PRKN-210ENST00000612540 F6X3S4 739 aa16.29■□□□□ 0.2
PRKN-210ENST00000612540 HMGB2P26583 209 aaKnown RBP16.29■□□□□ 0.2
PRKN-210ENST00000612540 IL6STP40189 918 aaPredicted RBP16.29■□□□□ 0.2
PRKN-210ENST00000612540 KIF6Q6ZMV9 814 aa16.29■□□□□ 0.2
PRKN-210ENST00000612540 DZIP1LQ8IYY4 767 aaKnown RBP16.29■□□□□ 0.2
PRKN-210ENST00000612540 PANK1Q8TE04 598 aa16.29■□□□□ 0.2
PRKN-210ENST00000612540 ARHGAP45Q92619 1136 aa16.29■□□□□ 0.2
PRKN-210ENST00000612540 COL15A1P39059 1388 aa16.28■□□□□ 0.2
PRKN-210ENST00000612540 POLD1P28340 1107 aa16.28■□□□□ 0.2
PRKN-210ENST00000612540 RC3H1Q5TC82 1133 aaKnown RBP16.28■□□□□ 0.2
PRKN-210ENST00000612540 C20orf194Q5TEA3 1177 aa16.28■□□□□ 0.2
PRKN-210ENST00000612540 SLC4A10Q6U841 1118 aa16.28■□□□□ 0.2
PRKN-210ENST00000612540 TTLL7Q6ZT98 887 aa16.28■□□□□ 0.2
PRKN-210ENST00000612540 LRP10Q7Z4F1 713 aa16.28■□□□□ 0.2
PRKN-210ENST00000612540 RIC3Q7Z5B4 369 aa16.28■□□□□ 0.2
PRKN-210ENST00000612540 UBR3Q6ZT12 1888 aa16.28■□□□□ 0.2
PRKN-210ENST00000612540 PI4KAP2A4QPH2 592 aa16.27■□□□□ 0.2
PRKN-210ENST00000612540 PI4KAP1Q8N8J0 262 aa16.27■□□□□ 0.2
PRKN-210ENST00000612540 ZBTB3Q9H5J0 574 aa16.27■□□□□ 0.2
PRKN-210ENST00000612540 RTCBQ9Y3I0 505 aaKnown RBP16.27■□□□□ 0.2
PRKN-210ENST00000612540 ADCY9O60503 1353 aa16.26■□□□□ 0.19
PRKN-210ENST00000612540 N4BP2Q86UW6 1770 aaPredicted RBP16.26■□□□□ 0.19
PRKN-210ENST00000612540 RPS6KA4O75676 772 aa16.26■□□□□ 0.19
PRKN-210ENST00000612540 PHF14O94880 888 aa16.26■□□□□ 0.19
PRKN-210ENST00000612540 RLBP1P12271 317 aa16.26■□□□□ 0.19
PRKN-210ENST00000612540 EIF5P55010 431 aaKnown RBP16.26■□□□□ 0.19
PRKN-210ENST00000612540 PDE3AQ14432 1141 aa16.26■□□□□ 0.19
PRKN-210ENST00000612540 KSR2Q6VAB6 950 aa16.26■□□□□ 0.19
PRKN-210ENST00000612540 DZIP3Q86Y13 1208 aaKnown RBP16.26■□□□□ 0.19
PRKN-210ENST00000612540 COL23A1Q86Y22 540 aaPredicted RBP16.26■□□□□ 0.19
PRKN-210ENST00000612540 ITPRIPQ8IWB1 547 aa16.26■□□□□ 0.19
PRKN-210ENST00000612540 DNAAF4Q8WXU2 420 aa16.26■□□□□ 0.19
PRKN-210ENST00000612540 MAP3K2Q9Y2U5 619 aa16.26■□□□□ 0.19
PRKN-210ENST00000612540 AFDNP55196 1824 aaKnown RBP16.26■□□□□ 0.19
PRKN-210ENST00000612540 ABCC4O15439 1325 aa16.25■□□□□ 0.19
PRKN-210ENST00000612540 A0A087WZG4 1122 aa16.25■□□□□ 0.19
PRKN-210ENST00000612540 ANKRD13DQ6ZTN6 518 aa16.25■□□□□ 0.19
PRKN-210ENST00000612540 ZNF784Q8NCA9 323 aaPredicted RBP16.25■□□□□ 0.19
PRKN-210ENST00000612540 PLBD2Q8NHP8 589 aa16.25■□□□□ 0.19
PRKN-210ENST00000612540 TBC1D2BQ9UPU7 963 aa16.25■□□□□ 0.19
PRKN-210ENST00000612540 COG6Q9Y2V7 657 aa16.25■□□□□ 0.19
PRKN-210ENST00000612540 C4AP0C0L4 1744 aa16.25■□□□□ 0.19
PRKN-210ENST00000612540 PXDNLA1KZ92 1463 aa16.24■□□□□ 0.19
PRKN-210ENST00000612540 SMIM5Q71RC9 77 aa16.24■□□□□ 0.19
PRKN-210ENST00000612540 TMEM57Q8N5G2 664 aa16.24■□□□□ 0.19
PRKN-210ENST00000612540 CRBNQ96SW2 442 aa16.24■□□□□ 0.19
PRKN-210ENST00000612540 NUP98P52948 1817 aa16.24■□□□□ 0.19
PRKN-210ENST00000612540 BCORQ6W2J9 1755 aa16.23■□□□□ 0.19
PRKN-210ENST00000612540 MAP3K15Q6ZN16 1313 aa16.23■□□□□ 0.19
PRKN-210ENST00000612540 NEXNQ0ZGT2 675 aa16.23■□□□□ 0.19
PRKN-210ENST00000612540 FKBP8Q14318 412 aa16.23■□□□□ 0.19
PRKN-210ENST00000612540 PELP1Q8IZL8 1130 aaKnown RBP16.23■□□□□ 0.19
PRKN-210ENST00000612540 SCN7AQ01118 1682 aa16.23■□□□□ 0.19
PRKN-210ENST00000612540 ANKRD36CQ5JPF3 1778 aa16.23■□□□□ 0.19
PRKN-210ENST00000612540 MSH5O43196 834 aa16.22■□□□□ 0.19
PRKN-210ENST00000612540 CCT4P50991 539 aaKnown RBP16.22■□□□□ 0.19
PRKN-210ENST00000612540 GPR162Q16538 588 aa16.22■□□□□ 0.19
PRKN-210ENST00000612540 NLGN2Q8NFZ4 835 aa16.22■□□□□ 0.19
PRKN-210ENST00000612540 MYD88Q99836 296 aa16.22■□□□□ 0.19
PRKN-210ENST00000612540 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.21■□□□□ 0.19
PRKN-210ENST00000612540 MVPQ14764 893 aaKnown RBP16.21■□□□□ 0.19
PRKN-210ENST00000612540 TRAPPC3LQ5T215 181 aa16.21■□□□□ 0.19
PRKN-210ENST00000612540 METTL22Q9BUU2 404 aaPredicted RBP16.21■□□□□ 0.19
PRKN-210ENST00000612540 SRCIN1Q9C0H9 1055 aa16.21■□□□□ 0.19
PRKN-210ENST00000612540 ZPR1O75312 459 aa16.2■□□□□ 0.18
PRKN-210ENST00000612540 ADRA2BP18089 450 aa16.2■□□□□ 0.18
PRKN-210ENST00000612540 SSFA2P28290 1259 aa16.2■□□□□ 0.18
PRKN-210ENST00000612540 RFC4P35249 363 aa16.2■□□□□ 0.18
PRKN-210ENST00000612540 AMIGO3Q86WK7 504 aa16.2■□□□□ 0.18
PRKN-210ENST00000612540 FLAD1Q8NFF5 587 aa16.2■□□□□ 0.18
PRKN-210ENST00000612540 EXOC6Q8TAG9 804 aa16.2■□□□□ 0.18
PRKN-210ENST00000612540 ATP10DQ9P241 1426 aa16.19■□□□□ 0.18
PRKN-210ENST00000612540 ATP5J2-PTCD1G3V325 749 aa16.19■□□□□ 0.18
PRKN-210ENST00000612540 CAMTA2O94983 1202 aa16.19■□□□□ 0.18
PRKN-210ENST00000612540 HLFQ16534 295 aa16.19■□□□□ 0.18
PRKN-210ENST00000612540 MSL1Q68DK7 614 aa16.19■□□□□ 0.18
PRKN-210ENST00000612540 INTS3Q68E01 1043 aaKnown RBP16.19■□□□□ 0.18
PRKN-210ENST00000612540 ARHGEF1Q92888 912 aaKnown RBP16.19■□□□□ 0.18
PRKN-210ENST00000612540 SRP68Q9UHB9 627 aaKnown RBP16.19■□□□□ 0.18
PRKN-210ENST00000612540 DDX19BQ9UMR2 479 aa16.19■□□□□ 0.18
PRKN-210ENST00000612540 ZNF652Q9Y2D9 606 aa16.19■□□□□ 0.18
PRKN-210ENST00000612540 ERVV-1B6SEH8 477 aa16.18■□□□□ 0.18
PRKN-210ENST00000612540 HSP90AB3PQ58FF7 597 aa16.18■□□□□ 0.18
PRKN-210ENST00000612540 BEND3Q5T5X7 828 aa16.18■□□□□ 0.18
PRKN-210ENST00000612540 GIGYF2Q6Y7W6 1299 aaKnown RBP16.18■□□□□ 0.18
PRKN-210ENST00000612540 LINS1Q8NG48 757 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms