RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 NECTIN2Q92692 538 aa23.48■■□□□ 1.35
SEMA3B-211ENST00000612509 MAP3K15Q6ZN16 1313 aa23.48■■□□□ 1.35
SEMA3B-211ENST00000612509 DLEC1Q9Y238 1755 aa23.47■■□□□ 1.35
SEMA3B-211ENST00000612509 CCER2I3L3R5 266 aa23.47■■□□□ 1.35
SEMA3B-211ENST00000612509 ANXA1P04083 346 aa23.47■■□□□ 1.35
SEMA3B-211ENST00000612509 DUSP27Q5VZP5 1158 aa23.47■■□□□ 1.35
SEMA3B-211ENST00000612509 TTLL7Q6ZT98 887 aa23.47■■□□□ 1.35
SEMA3B-211ENST00000612509 IL16Q14005 1332 aa23.47■■□□□ 1.35
SEMA3B-211ENST00000612509 CHD4Q14839 1912 aa23.46■■□□□ 1.35
SEMA3B-211ENST00000612509 SETDB2Q96T68 719 aa23.46■■□□□ 1.35
SEMA3B-211ENST00000612509 ATP10DQ9P241 1426 aa23.46■■□□□ 1.35
SEMA3B-211ENST00000612509 WWC3Q9ULE0 1092 aa23.46■■□□□ 1.35
SEMA3B-211ENST00000612509 SALL2Q9Y467 1007 aaPredicted RBP23.46■■□□□ 1.35
SEMA3B-211ENST00000612509 ERVV-1B6SEH8 477 aa23.45■■□□□ 1.34
SEMA3B-211ENST00000612509 DPEP1P16444 411 aa23.45■■□□□ 1.34
SEMA3B-211ENST00000612509 HLFQ16534 295 aa23.45■■□□□ 1.34
SEMA3B-211ENST00000612509 TSR2Q969E8 191 aaKnown RBP23.45■■□□□ 1.34
SEMA3B-211ENST00000612509 CHPF2Q9P2E5 772 aa23.45■■□□□ 1.34
SEMA3B-211ENST00000612509 A0A0G2JLW4 131 aa23.44■■□□□ 1.34
SEMA3B-211ENST00000612509 ZBTB3Q9H5J0 574 aa23.44■■□□□ 1.34
SEMA3B-211ENST00000612509 DDX21Q9NR30 783 aaKnown RBP eCLIP23.44■■□□□ 1.34
SEMA3B-211ENST00000612509 ANKRD36CQ5JPF3 1778 aa23.44■■□□□ 1.34
SEMA3B-211ENST00000612509 COL11A2P13942 1736 aaPredicted RBP23.44■■□□□ 1.34
SEMA3B-211ENST00000612509 PRR5LQ6MZQ0 368 aa23.43■■□□□ 1.34
SEMA3B-211ENST00000612509 CNBD1Q8NA66 436 aa23.43■■□□□ 1.34
SEMA3B-211ENST00000612509 NIP7Q9Y221 180 aaKnown RBP eCLIP23.43■■□□□ 1.34
SEMA3B-211ENST00000612509 UTRNP46939 3433 aa23.43■■□□□ 1.34
SEMA3B-211ENST00000612509 GOLGB1Q14789 3259 aaKnown RBP23.42■■□□□ 1.34
SEMA3B-211ENST00000612509 DIEXFQ68CQ4 756 aaKnown RBP23.42■■□□□ 1.34
SEMA3B-211ENST00000612509 ARFGEF1Q9Y6D6 1849 aa23.42■■□□□ 1.34
SEMA3B-211ENST00000612509 GRIN3BO60391 1043 aa23.41■■□□□ 1.34
SEMA3B-211ENST00000612509 WDR63Q8IWG1 891 aa23.41■■□□□ 1.34
SEMA3B-211ENST00000612509 C8orf58Q8NAV2 365 aa23.41■■□□□ 1.34
SEMA3B-211ENST00000612509 FANCIQ9NVI1 1328 aa23.4■■□□□ 1.34
SEMA3B-211ENST00000612509 ELL2O00472 640 aaPredicted RBP23.4■■□□□ 1.34
SEMA3B-211ENST00000612509 KCNA3P22001 575 aa23.4■■□□□ 1.34
SEMA3B-211ENST00000612509 CHRNA5P30532 468 aa23.4■■□□□ 1.34
SEMA3B-211ENST00000612509 NBPF5PQ86XG9 351 aaPredicted RBP23.4■■□□□ 1.34
SEMA3B-211ENST00000612509 XAGE3Q8WTP9 111 aa23.4■■□□□ 1.34
SEMA3B-211ENST00000612509 DBF4Q9UBU7 674 aaPredicted RBP23.4■■□□□ 1.34
SEMA3B-211ENST00000612509 NPHP1O15259 732 aa23.39■■□□□ 1.33
SEMA3B-211ENST00000612509 ST5P78524 1137 aa23.39■■□□□ 1.33
SEMA3B-211ENST00000612509 COPS6Q7L5N1 327 aa23.39■■□□□ 1.33
SEMA3B-211ENST00000612509 GIGYF2Q6Y7W6 1299 aaKnown RBP23.38■■□□□ 1.33
SEMA3B-211ENST00000612509 CCDC24Q8N4L8 307 aa23.38■■□□□ 1.33
SEMA3B-211ENST00000612509 TSPYL6Q8N831 410 aa23.38■■□□□ 1.33
SEMA3B-211ENST00000612509 IBTKQ9P2D0 1353 aaPredicted RBP23.38■■□□□ 1.33
SEMA3B-211ENST00000612509 ARFGEF2Q9Y6D5 1785 aa23.37■■□□□ 1.33
SEMA3B-211ENST00000612509 UBN2Q6ZU65 1347 aa23.37■■□□□ 1.33
SEMA3B-211ENST00000612509 AIMP1Q12904 312 aaKnown RBP23.37■■□□□ 1.33
SEMA3B-211ENST00000612509 BCS1LQ9Y276 419 aa23.37■■□□□ 1.33
SEMA3B-211ENST00000612509 TNRC6CQ9HCJ0 1690 aaKnown RBP23.37■■□□□ 1.33
SEMA3B-211ENST00000612509 YY1P25490 414 aa23.36■■□□□ 1.33
SEMA3B-211ENST00000612509 BRIP1Q9BX63 1249 aa23.36■■□□□ 1.33
SEMA3B-211ENST00000612509 PIM2Q9P1W9 311 aa23.36■■□□□ 1.33
SEMA3B-211ENST00000612509 ZNF521Q96K83 1311 aa23.35■■□□□ 1.33
SEMA3B-211ENST00000612509 FAM177BA6PVY3 158 aa23.35■■□□□ 1.33
SEMA3B-211ENST00000612509 GPTP24298 496 aa23.35■■□□□ 1.33
SEMA3B-211ENST00000612509 C2CD5Q86YS7 1000 aa23.35■■□□□ 1.33
SEMA3B-211ENST00000612509 HYPKQ9NX55 129 aa23.35■■□□□ 1.33
SEMA3B-211ENST00000612509 PDE6BP35913 854 aa23.34■■□□□ 1.33
SEMA3B-211ENST00000612509 ZNF34Q8IZ26 560 aa23.34■■□□□ 1.33
SEMA3B-211ENST00000612509 SPINK5Q9NQ38 1064 aaPredicted RBP23.34■■□□□ 1.33
SEMA3B-211ENST00000612509 ABCC12Q96J65 1359 aa23.34■■□□□ 1.33
SEMA3B-211ENST00000612509 TWISTNBQ3B726 338 aaPredicted RBP23.33■■□□□ 1.33
SEMA3B-211ENST00000612509 DALRD3Q5D0E6 543 aaKnown RBP23.33■■□□□ 1.33
SEMA3B-211ENST00000612509 CCDC30Q5VVM6 783 aa23.33■■□□□ 1.33
SEMA3B-211ENST00000612509 TPTE2Q6XPS3 522 aa23.33■■□□□ 1.33
SEMA3B-211ENST00000612509 PDZRN3Q9UPQ7 1066 aa23.33■■□□□ 1.33
SEMA3B-211ENST00000612509 H0YIN7 160 aa23.32■■□□□ 1.32
SEMA3B-211ENST00000612509 HSP90AB3PQ58FF7 597 aa23.32■■□□□ 1.32
SEMA3B-211ENST00000612509 MIER1Q8N108 512 aa23.32■■□□□ 1.32
SEMA3B-211ENST00000612509 CHMP4AQ9BY43 222 aa23.32■■□□□ 1.32
SEMA3B-211ENST00000612509 NYXQ9GZU5 481 aa23.32■■□□□ 1.32
SEMA3B-211ENST00000612509 CACNA1SQ13698 1873 aa23.32■■□□□ 1.32
SEMA3B-211ENST00000612509 PLBD2Q8NHP8 589 aa23.31■■□□□ 1.32
SEMA3B-211ENST00000612509 MYH16Q9H6N6 1097 aa23.31■■□□□ 1.32
SEMA3B-211ENST00000612509 RIC1Q4ADV7 1423 aa23.31■■□□□ 1.32
SEMA3B-211ENST00000612509 GOLGA2Q08379 1002 aa23.3■■□□□ 1.32
SEMA3B-211ENST00000612509 PARP10Q53GL7 1025 aa23.3■■□□□ 1.32
SEMA3B-211ENST00000612509 SUSD4Q5VX71 490 aa23.3■■□□□ 1.32
SEMA3B-211ENST00000612509 NTSR2O95665 410 aa23.29■■□□□ 1.32
SEMA3B-211ENST00000612509 GTF2E1P29083 439 aaPredicted RBP23.29■■□□□ 1.32
SEMA3B-211ENST00000612509 NUTM1Q86Y26 1132 aa23.29■■□□□ 1.32
SEMA3B-211ENST00000612509 PHAXQ9H814 394 aaKnown RBP23.29■■□□□ 1.32
SEMA3B-211ENST00000612509 EXOSC9Q06265 439 aaKnown RBP23.28■■□□□ 1.32
SEMA3B-211ENST00000612509 TCIRG1Q13488 830 aa23.28■■□□□ 1.32
SEMA3B-211ENST00000612509 ANKRD13DQ6ZTN6 518 aa23.28■■□□□ 1.32
SEMA3B-211ENST00000612509 TTLL6Q8N841 843 aa23.28■■□□□ 1.32
SEMA3B-211ENST00000612509 ERFEQ4G0M1 354 aa23.27■■□□□ 1.32
SEMA3B-211ENST00000612509 PPP1R42Q7Z4L9 355 aa23.27■■□□□ 1.32
SEMA3B-211ENST00000612509 ZNF622Q969S3 477 aaKnown RBP eCLIP23.27■■□□□ 1.32
SEMA3B-211ENST00000612509 STK31Q9BXU1 1019 aa23.27■■□□□ 1.32
SEMA3B-211ENST00000612509 SRGNP10124 158 aa23.26■■□□□ 1.31
SEMA3B-211ENST00000612509 CACNA1FO60840 1977 aa23.26■■□□□ 1.31
SEMA3B-211ENST00000612509 KLRG2A4D1S0 409 aaPredicted RBP23.25■■□□□ 1.31
SEMA3B-211ENST00000612509 TCERG1O14776 1098 aaKnown RBP23.25■■□□□ 1.31
SEMA3B-211ENST00000612509 STYK1Q6J9G0 422 aa23.25■■□□□ 1.31
SEMA3B-211ENST00000612509 NLRP10Q86W26 655 aa23.25■■□□□ 1.31
SEMA3B-211ENST00000612509 MASTLQ96GX5 879 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms