RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 DDX21Q9NR30 783 aaKnown RBP eCLIP10.14□□□□□ -0.79
PTCHD3P1-201ENST00000612350 HACL1Q9UJ83 578 aa10.14□□□□□ -0.79
PTCHD3P1-201ENST00000612350 CA12O43570 354 aa10.13□□□□□ -0.79
PTCHD3P1-201ENST00000612350 AOC2O75106 756 aa10.13□□□□□ -0.79
PTCHD3P1-201ENST00000612350 ZPR1O75312 459 aa10.13□□□□□ -0.79
PTCHD3P1-201ENST00000612350 TRIM26Q12899 539 aaPredicted RBP10.13□□□□□ -0.79
PTCHD3P1-201ENST00000612350 PNMA8AQ86V59 439 aaPredicted RBP10.13□□□□□ -0.79
PTCHD3P1-201ENST00000612350 ANKRD31Q8N7Z5 1873 aa10.13□□□□□ -0.79
PTCHD3P1-201ENST00000612350 PTCD1O75127 700 aaKnown RBP10.12□□□□□ -0.79
PTCHD3P1-201ENST00000612350 GRM1Q13255 1194 aa10.12□□□□□ -0.79
PTCHD3P1-201ENST00000612350 CST9Q5W186 159 aa10.12□□□□□ -0.79
PTCHD3P1-201ENST00000612350 PAXIP1Q6ZW49 1069 aaPredicted RBP10.12□□□□□ -0.79
PTCHD3P1-201ENST00000612350 ZNF622Q969S3 477 aaKnown RBP eCLIP10.12□□□□□ -0.79
PTCHD3P1-201ENST00000612350 EYA1Q99502 592 aa10.12□□□□□ -0.79
PTCHD3P1-201ENST00000612350 NARFQ9UHQ1 456 aa10.12□□□□□ -0.79
PTCHD3P1-201ENST00000612350 TJP1Q07157 1748 aa10.12□□□□□ -0.79
PTCHD3P1-201ENST00000612350 SOS1Q07889 1333 aaPredicted RBP10.11□□□□□ -0.79
PTCHD3P1-201ENST00000612350 ZNF541Q9H0D2 1346 aa10.11□□□□□ -0.79
PTCHD3P1-201ENST00000612350 TLL2Q9Y6L7 1015 aa10.11□□□□□ -0.79
PTCHD3P1-201ENST00000612350 SLX4Q8IY92 1834 aa10.11□□□□□ -0.79
PTCHD3P1-201ENST00000612350 TRPM7Q96QT4 1865 aa10.1□□□□□ -0.79
PTCHD3P1-201ENST00000612350 PDZRN3Q9UPQ7 1066 aa10.1□□□□□ -0.79
PTCHD3P1-201ENST00000612350 EMILIN1Q9Y6C2 1016 aa10.1□□□□□ -0.79
PTCHD3P1-201ENST00000612350 RNF123Q5XPI4 1314 aa10.09□□□□□ -0.79
PTCHD3P1-201ENST00000612350 MNX1P50219 401 aaPredicted RBP10.09□□□□□ -0.79
PTCHD3P1-201ENST00000612350 BRPF1P55201 1214 aaPredicted RBP10.09□□□□□ -0.79
PTCHD3P1-201ENST00000612350 CABP4P57796 275 aa10.09□□□□□ -0.79
PTCHD3P1-201ENST00000612350 HABP4Q5JVS0 413 aaKnown RBP10.09□□□□□ -0.79
PTCHD3P1-201ENST00000612350 GCC1Q96CN9 775 aa10.09□□□□□ -0.79
PTCHD3P1-201ENST00000612350 BRIP1Q9BX63 1249 aa10.09□□□□□ -0.79
PTCHD3P1-201ENST00000612350 COL11A2P13942 1736 aaPredicted RBP10.09□□□□□ -0.79
PTCHD3P1-201ENST00000612350 PDE6BP35913 854 aa10.08□□□□□ -0.8
PTCHD3P1-201ENST00000612350 DNAJC10Q8IXB1 793 aa10.08□□□□□ -0.8
PTCHD3P1-201ENST00000612350 C7orf43Q8WVR3 580 aa10.08□□□□□ -0.8
PTCHD3P1-201ENST00000612350 CACNA1SQ13698 1873 aa10.08□□□□□ -0.8
PTCHD3P1-201ENST00000612350 WASHC2AQ641Q2 1341 aa10.07□□□□□ -0.8
PTCHD3P1-201ENST00000612350 FZD9O00144 591 aa10.07□□□□□ -0.8
PTCHD3P1-201ENST00000612350 TRAF5O00463 557 aa10.07□□□□□ -0.8
PTCHD3P1-201ENST00000612350 HSP90AB1P08238 724 aaKnown RBP10.07□□□□□ -0.8
PTCHD3P1-201ENST00000612350 SOGA3Q5TF21 947 aa10.07□□□□□ -0.8
PTCHD3P1-201ENST00000612350 LHX8Q68G74 356 aa10.07□□□□□ -0.8
PTCHD3P1-201ENST00000612350 CIAPIN1Q6FI81 312 aa10.07□□□□□ -0.8
PTCHD3P1-201ENST00000612350 PRPF40BQ6NWY9 871 aaKnown RBP10.07□□□□□ -0.8
PTCHD3P1-201ENST00000612350 SAPCD2Q86UD0 394 aa10.07□□□□□ -0.8
PTCHD3P1-201ENST00000612350 CNKSR1Q969H4 720 aa10.07□□□□□ -0.8
PTCHD3P1-201ENST00000612350 DCBLD2Q96PD2 775 aa10.07□□□□□ -0.8
PTCHD3P1-201ENST00000612350 CYP19A1P11511 503 aaPredicted RBP10.06□□□□□ -0.8
PTCHD3P1-201ENST00000612350 STYK1Q6J9G0 422 aa10.06□□□□□ -0.8
PTCHD3P1-201ENST00000612350 PRR5LQ6MZQ0 368 aa10.06□□□□□ -0.8
PTCHD3P1-201ENST00000612350 CCDC24Q8N4L8 307 aa10.06□□□□□ -0.8
PTCHD3P1-201ENST00000612350 NFATC2IPQ8NCF5 419 aa10.06□□□□□ -0.8
PTCHD3P1-201ENST00000612350 HHIPL1Q96JK4 782 aa10.06□□□□□ -0.8
PTCHD3P1-201ENST00000612350 ZIC5Q96T25 663 aa10.06□□□□□ -0.8
PTCHD3P1-201ENST00000612350 ARFGEF2Q9Y6D5 1785 aa10.06□□□□□ -0.8
PTCHD3P1-201ENST00000612350 COL15A1P39059 1388 aa10.05□□□□□ -0.8
PTCHD3P1-201ENST00000612350 SRGNP10124 158 aa10.05□□□□□ -0.8
PTCHD3P1-201ENST00000612350 BICDL1Q6ZP65 573 aa10.05□□□□□ -0.8
PTCHD3P1-201ENST00000612350 GPC2Q8N158 579 aa10.05□□□□□ -0.8
PTCHD3P1-201ENST00000612350 ZNF277Q9NRM2 450 aaPredicted RBP10.05□□□□□ -0.8
PTCHD3P1-201ENST00000612350 FKBP4Q02790 459 aaKnown RBP eCLIP10.04□□□□□ -0.8
PTCHD3P1-201ENST00000612350 TBC1D9BQ66K14 1250 aa10.04□□□□□ -0.8
PTCHD3P1-201ENST00000612350 NBPF15Q8N660 670 aa10.04□□□□□ -0.8
PTCHD3P1-201ENST00000612350 TESK2Q96S53 571 aa10.04□□□□□ -0.8
PTCHD3P1-201ENST00000612350 CARD11Q9BXL7 1154 aa10.04□□□□□ -0.8
PTCHD3P1-201ENST00000612350 ZBTB1Q9Y2K1 713 aa10.04□□□□□ -0.8
PTCHD3P1-201ENST00000612350 ST20-MTHFSA0A0A6YYL1 179 aa10.03□□□□□ -0.8
PTCHD3P1-201ENST00000612350 PPM1GO15355 546 aaPredicted RBP10.03□□□□□ -0.8
PTCHD3P1-201ENST00000612350 MTHFSP49914 203 aa10.03□□□□□ -0.8
PTCHD3P1-201ENST00000612350 FXR1P51114 621 aaKnown RBP eCLIP10.03□□□□□ -0.8
PTCHD3P1-201ENST00000612350 CCDC93Q567U6 631 aa10.03□□□□□ -0.8
PTCHD3P1-201ENST00000612350 MASTLQ96GX5 879 aa10.03□□□□□ -0.8
PTCHD3P1-201ENST00000612350 ANKRD26Q9UPS8 1709 aa10.03□□□□□ -0.8
PTCHD3P1-201ENST00000612350 EPS15P42566 896 aa10.02□□□□□ -0.81
PTCHD3P1-201ENST00000612350 KIF20BQ96Q89 1820 aa10.02□□□□□ -0.81
PTCHD3P1-201ENST00000612350 CELF2O95319 508 aaKnown RBP10.01□□□□□ -0.81
PTCHD3P1-201ENST00000612350 IARSP41252 1262 aaKnown RBP10.01□□□□□ -0.81
PTCHD3P1-201ENST00000612350 SCNN1DP51172 638 aa10.01□□□□□ -0.81
PTCHD3P1-201ENST00000612350 EIF5P55010 431 aaKnown RBP10.01□□□□□ -0.81
PTCHD3P1-201ENST00000612350 EIF4A2Q14240 407 aaKnown RBP10.01□□□□□ -0.81
PTCHD3P1-201ENST00000612350 PLEKHO1Q53GL0 409 aaPredicted RBP10.01□□□□□ -0.81
PTCHD3P1-201ENST00000612350 ZNF530Q6P9A1 599 aaPredicted RBP10.01□□□□□ -0.81
PTCHD3P1-201ENST00000612350 OLFM4Q6UX06 510 aa10.01□□□□□ -0.81
PTCHD3P1-201ENST00000612350 USP50Q70EL3 339 aaPredicted RBP10.01□□□□□ -0.81
PTCHD3P1-201ENST00000612350 SIN3AQ96ST3 1273 aa10.01□□□□□ -0.81
PTCHD3P1-201ENST00000612350 DLL1O00548 723 aa10□□□□□ -0.81
PTCHD3P1-201ENST00000612350 NOGQ13253 232 aa10□□□□□ -0.81
PTCHD3P1-201ENST00000612350 CTU1Q7Z7A3 348 aaKnown RBP10□□□□□ -0.81
PTCHD3P1-201ENST00000612350 SYNE4Q8N205 404 aa10□□□□□ -0.81
PTCHD3P1-201ENST00000612350 SAGE1Q9NXZ1 904 aa10□□□□□ -0.81
PTCHD3P1-201ENST00000612350 POLKQ9UBT6 870 aa10□□□□□ -0.81
PTCHD3P1-201ENST00000612350 HPS5Q9UPZ3 1129 aa10□□□□□ -0.81
PTCHD3P1-201ENST00000612350 GALR2O43603 387 aaPredicted RBP9.99□□□□□ -0.81
PTCHD3P1-201ENST00000612350 CANXP27824 592 aaKnown RBP9.99□□□□□ -0.81
PTCHD3P1-201ENST00000612350 LMOD1P29536 600 aaPredicted RBP9.99□□□□□ -0.81
PTCHD3P1-201ENST00000612350 AMOTQ4VCS5 1084 aa9.99□□□□□ -0.81
PTCHD3P1-201ENST00000612350 RTKN2Q8IZC4 609 aa9.99□□□□□ -0.81
PTCHD3P1-201ENST00000612350 GJA3Q9Y6H8 435 aa9.99□□□□□ -0.81
PTCHD3P1-201ENST00000612350 COL4A5P29400 1685 aa9.99□□□□□ -0.81
PTCHD3P1-201ENST00000612350 KLRG2A4D1S0 409 aaPredicted RBP9.98□□□□□ -0.81
PTCHD3P1-201ENST00000612350 CNBD1Q8NA66 436 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms