RNA–Protein interactions for RNA: ENST00000612292.1

MMP28-202, Transcript of matrix metallopeptidase 28, humanhuman

TSL 5

Gene MMP28, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-202ENST00000612292 ZNF853P0CG23 659 aa24.11■■□□□ 1.45
MMP28-202ENST00000612292 MYL6BP14649 208 aa24.11■■□□□ 1.45
MMP28-202ENST00000612292 TTLL7Q6ZT98 887 aa24.11■■□□□ 1.45
MMP28-202ENST00000612292 LAS1LQ9Y4W2 734 aaKnown RBP24.11■■□□□ 1.45
MMP28-202ENST00000612292 NUP98P52948 1817 aa24.11■■□□□ 1.45
MMP28-202ENST00000612292 DLEC1Q9Y238 1755 aa24.11■■□□□ 1.45
MMP28-202ENST00000612292 EIF2S2P20042 333 aaKnown RBP24.1■■□□□ 1.45
MMP28-202ENST00000612292 KRT24Q2M2I5 525 aa24.1■■□□□ 1.45
MMP28-202ENST00000612292 ARHGAP27Q6ZUM4 889 aa24.1■■□□□ 1.45
MMP28-202ENST00000612292 CCDC24Q8N4L8 307 aa24.1■■□□□ 1.45
MMP28-202ENST00000612292 H0YIN7 160 aa24.09■■□□□ 1.45
MMP28-202ENST00000612292 C2CD5Q86YS7 1000 aa24.09■■□□□ 1.45
MMP28-202ENST00000612292 MAP3K15Q6ZN16 1313 aa24.09■■□□□ 1.45
MMP28-202ENST00000612292 PDE6BP35913 854 aa24.08■■□□□ 1.45
MMP28-202ENST00000612292 PDZRN3Q9UPQ7 1066 aa24.08■■□□□ 1.45
MMP28-202ENST00000612292 NIP7Q9Y221 180 aaKnown RBP eCLIP24.08■■□□□ 1.45
MMP28-202ENST00000612292 ADCY9O60503 1353 aa24.07■■□□□ 1.44
MMP28-202ENST00000612292 CNBD1Q8NA66 436 aa24.07■■□□□ 1.44
MMP28-202ENST00000612292 PROSER3Q2NL68 480 aa24.06■■□□□ 1.44
MMP28-202ENST00000612292 TTLL6Q8N841 843 aa24.06■■□□□ 1.44
MMP28-202ENST00000612292 MRS2Q9HD23 443 aa24.06■■□□□ 1.44
MMP28-202ENST00000612292 MBIPQ9NS73 344 aa24.06■■□□□ 1.44
MMP28-202ENST00000612292 TPTE2Q6XPS3 522 aa24.05■■□□□ 1.44
MMP28-202ENST00000612292 NBPF5PQ86XG9 351 aaPredicted RBP24.05■■□□□ 1.44
MMP28-202ENST00000612292 ANXA1P04083 346 aa24.04■■□□□ 1.44
MMP28-202ENST00000612292 ST5P78524 1137 aa24.04■■□□□ 1.44
MMP28-202ENST00000612292 KIF6Q6ZMV9 814 aa24.04■■□□□ 1.44
MMP28-202ENST00000612292 IFT57Q9NWB7 429 aa24.04■■□□□ 1.44
MMP28-202ENST00000612292 HOXB7P09629 217 aa24.03■■□□□ 1.44
MMP28-202ENST00000612292 CALD1Q05682 793 aaKnown RBP24.03■■□□□ 1.44
MMP28-202ENST00000612292 GIGYF2Q6Y7W6 1299 aaKnown RBP24.03■■□□□ 1.44
MMP28-202ENST00000612292 NECTIN2Q92692 538 aa24.03■■□□□ 1.44
MMP28-202ENST00000612292 ZBTB3Q9H5J0 574 aa24.03■■□□□ 1.44
MMP28-202ENST00000612292 DDX21Q9NR30 783 aaKnown RBP eCLIP24.03■■□□□ 1.44
MMP28-202ENST00000612292 SBF1O95248 1867 aa24.02■■□□□ 1.44
MMP28-202ENST00000612292 KLRG2A4D1S0 409 aaPredicted RBP24.02■■□□□ 1.44
MMP28-202ENST00000612292 SRGNP10124 158 aa24.02■■□□□ 1.44
MMP28-202ENST00000612292 GNAI1P63096 354 aa24.02■■□□□ 1.44
MMP28-202ENST00000612292 CCDC27Q2M243 656 aa24.02■■□□□ 1.44
MMP28-202ENST00000612292 ZNF34Q8IZ26 560 aa24.02■■□□□ 1.44
MMP28-202ENST00000612292 ATP10DQ9P241 1426 aa24.01■■□□□ 1.43
MMP28-202ENST00000612292 COL11A2P13942 1736 aaPredicted RBP24.01■■□□□ 1.43
MMP28-202ENST00000612292 NPHP1O15259 732 aa24.01■■□□□ 1.43
MMP28-202ENST00000612292 NCBP3Q53F19 620 aaKnown RBP24.01■■□□□ 1.43
MMP28-202ENST00000612292 ZNF622Q969S3 477 aaKnown RBP eCLIP24.01■■□□□ 1.43
MMP28-202ENST00000612292 DUSP27Q5VZP5 1158 aa24■■□□□ 1.43
MMP28-202ENST00000612292 COPS6Q7L5N1 327 aa24■■□□□ 1.43
MMP28-202ENST00000612292 FAM177BA6PVY3 158 aa23.99■■□□□ 1.43
MMP28-202ENST00000612292 STYK1Q6J9G0 422 aa23.99■■□□□ 1.43
MMP28-202ENST00000612292 SUSD4Q5VX71 490 aa23.98■■□□□ 1.43
MMP28-202ENST00000612292 WWC1Q8IX03 1113 aa23.98■■□□□ 1.43
MMP28-202ENST00000612292 XAGE3Q8WTP9 111 aa23.98■■□□□ 1.43
MMP28-202ENST00000612292 MASTLQ96GX5 879 aa23.98■■□□□ 1.43
MMP28-202ENST00000612292 UBN2Q6ZU65 1347 aa23.98■■□□□ 1.43
MMP28-202ENST00000612292 HDGFL1Q5TGJ6 251 aa23.97■■□□□ 1.43
MMP28-202ENST00000612292 SLX4Q8IY92 1834 aa23.97■■□□□ 1.43
MMP28-202ENST00000612292 NYXQ9GZU5 481 aa23.97■■□□□ 1.43
MMP28-202ENST00000612292 CHPF2Q9P2E5 772 aa23.97■■□□□ 1.43
MMP28-202ENST00000612292 SENP3-EIF4A1A0A087X0R7 540 aa23.96■■□□□ 1.43
MMP28-202ENST00000612292 GPTP24298 496 aa23.96■■□□□ 1.43
MMP28-202ENST00000612292 AIMP1Q12904 312 aaKnown RBP23.96■■□□□ 1.43
MMP28-202ENST00000612292 C9orf131Q5VYM1 1079 aa23.96■■□□□ 1.43
MMP28-202ENST00000612292 CNKSR1Q969H4 720 aa23.96■■□□□ 1.43
MMP28-202ENST00000612292 NUTM1Q86Y26 1132 aa23.95■■□□□ 1.42
MMP28-202ENST00000612292 C8orf58Q8NAV2 365 aa23.95■■□□□ 1.42
MMP28-202ENST00000612292 DBF4Q9UBU7 674 aaPredicted RBP23.95■■□□□ 1.42
MMP28-202ENST00000612292 GTF2E1P29083 439 aaPredicted RBP23.94■■□□□ 1.42
MMP28-202ENST00000612292 PRELPP51888 382 aa23.94■■□□□ 1.42
MMP28-202ENST00000612292 ERFEQ4G0M1 354 aa23.94■■□□□ 1.42
MMP28-202ENST00000612292 CCDC88AQ3V6T2 1871 aa23.94■■□□□ 1.42
MMP28-202ENST00000612292 IBTKQ9P2D0 1353 aaPredicted RBP23.93■■□□□ 1.42
MMP28-202ENST00000612292 C21orf2O43822 256 aa23.93■■□□□ 1.42
MMP28-202ENST00000612292 NPR1P16066 1061 aa23.93■■□□□ 1.42
MMP28-202ENST00000612292 PARP10Q53GL7 1025 aa23.93■■□□□ 1.42
MMP28-202ENST00000612292 GPBP1L1Q9HC44 474 aaPredicted RBP23.93■■□□□ 1.42
MMP28-202ENST00000612292 CACNA1SQ13698 1873 aa23.93■■□□□ 1.42
MMP28-202ENST00000612292 ARFGEF2Q9Y6D5 1785 aa23.93■■□□□ 1.42
MMP28-202ENST00000612292 FER1L6Q2WGJ9 1857 aa23.92■■□□□ 1.42
MMP28-202ENST00000612292 ELL2O00472 640 aaPredicted RBP23.92■■□□□ 1.42
MMP28-202ENST00000612292 NTSR2O95665 410 aa23.92■■□□□ 1.42
MMP28-202ENST00000612292 TCIRG1Q13488 830 aa23.92■■□□□ 1.42
MMP28-202ENST00000612292 C7orf43Q8WVR3 580 aa23.92■■□□□ 1.42
MMP28-202ENST00000612292 HYPKQ9NX55 129 aa23.92■■□□□ 1.42
MMP28-202ENST00000612292 NFKBIEO00221 500 aa23.91■■□□□ 1.42
MMP28-202ENST00000612292 RASSF7Q02833 373 aa23.91■■□□□ 1.42
MMP28-202ENST00000612292 CRY2Q49AN0 593 aa23.91■■□□□ 1.42
MMP28-202ENST00000612292 PRPF40BQ6NWY9 871 aaKnown RBP23.91■■□□□ 1.42
MMP28-202ENST00000612292 PPP1R42Q7Z4L9 355 aa23.91■■□□□ 1.42
MMP28-202ENST00000612292 ZNF526Q8TF50 670 aaPredicted RBP23.91■■□□□ 1.42
MMP28-202ENST00000612292 RNF181Q9P0P0 153 aa23.91■■□□□ 1.42
MMP28-202ENST00000612292 ANKRD36CQ5JPF3 1778 aa23.91■■□□□ 1.42
MMP28-202ENST00000612292 ABCC12Q96J65 1359 aa23.91■■□□□ 1.42
MMP28-202ENST00000612292 IL16Q14005 1332 aa23.9■■□□□ 1.42
MMP28-202ENST00000612292 C1QTNF8P60827 252 aa23.9■■□□□ 1.42
MMP28-202ENST00000612292 HSP90AB3PQ58FF7 597 aa23.9■■□□□ 1.42
MMP28-202ENST00000612292 SLC10A5Q5PT55 438 aa23.9■■□□□ 1.42
MMP28-202ENST00000612292 ANKRD13DQ6ZTN6 518 aa23.9■■□□□ 1.42
MMP28-202ENST00000612292 PLBD2Q8NHP8 589 aa23.9■■□□□ 1.42
MMP28-202ENST00000612292 TSPYL6Q8N831 410 aa23.89■■□□□ 1.41
MMP28-202ENST00000612292 ZNF219Q9P2Y4 722 aaPredicted RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms