RNA–Protein interactions for RNA: ENST00000611917.1

FAM228B-207, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 3

Gene FAM228B, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-207ENST00000611917 HOXB7P09629 217 aa16.2■□□□□ 0.18
FAM228B-207ENST00000611917 HLFQ16534 295 aa16.2■□□□□ 0.18
FAM228B-207ENST00000611917 CCDC184Q52MB2 194 aa16.2■□□□□ 0.18
FAM228B-207ENST00000611917 NYXQ9GZU5 481 aa16.2■□□□□ 0.18
FAM228B-207ENST00000611917 MAP3K15Q6ZN16 1313 aa16.19■□□□□ 0.18
FAM228B-207ENST00000611917 C4AP0C0L4 1744 aa16.19■□□□□ 0.18
FAM228B-207ENST00000611917 PXDNLA1KZ92 1463 aa16.19■□□□□ 0.18
FAM228B-207ENST00000611917 NCBP3Q53F19 620 aaKnown RBP16.19■□□□□ 0.18
FAM228B-207ENST00000611917 CNKSR1Q969H4 720 aa16.19■□□□□ 0.18
FAM228B-207ENST00000611917 IFT57Q9NWB7 429 aa16.19■□□□□ 0.18
FAM228B-207ENST00000611917 TTLL7Q6ZT98 887 aa16.18■□□□□ 0.18
FAM228B-207ENST00000611917 NECTIN2Q92692 538 aa16.18■□□□□ 0.18
FAM228B-207ENST00000611917 DDX21Q9NR30 783 aaKnown RBP eCLIP16.18■□□□□ 0.18
FAM228B-207ENST00000611917 FAM177BA6PVY3 158 aa16.17■□□□□ 0.18
FAM228B-207ENST00000611917 ZNF853P0CG23 659 aa16.17■□□□□ 0.18
FAM228B-207ENST00000611917 CCDC27Q2M243 656 aa16.17■□□□□ 0.18
FAM228B-207ENST00000611917 DUSP27Q5VZP5 1158 aa16.17■□□□□ 0.18
FAM228B-207ENST00000611917 GIGYF2Q6Y7W6 1299 aaKnown RBP16.17■□□□□ 0.18
FAM228B-207ENST00000611917 COPS6Q7L5N1 327 aa16.17■□□□□ 0.18
FAM228B-207ENST00000611917 PPP1R42Q7Z4L9 355 aa16.17■□□□□ 0.18
FAM228B-207ENST00000611917 CCDC24Q8N4L8 307 aa16.17■□□□□ 0.18
FAM228B-207ENST00000611917 MASTLQ96GX5 879 aa16.17■□□□□ 0.18
FAM228B-207ENST00000611917 AIMP1Q12904 312 aaKnown RBP16.16■□□□□ 0.18
FAM228B-207ENST00000611917 PDIA6Q15084 440 aa16.16■□□□□ 0.18
FAM228B-207ENST00000611917 HSP90AB3PQ58FF7 597 aa16.16■□□□□ 0.18
FAM228B-207ENST00000611917 HDGFL1Q5TGJ6 251 aa16.16■□□□□ 0.18
FAM228B-207ENST00000611917 STYK1Q6J9G0 422 aa16.16■□□□□ 0.18
FAM228B-207ENST00000611917 ZBTB3Q9H5J0 574 aa16.16■□□□□ 0.18
FAM228B-207ENST00000611917 MBIPQ9NS73 344 aa16.16■□□□□ 0.18
FAM228B-207ENST00000611917 DBF4Q9UBU7 674 aaPredicted RBP16.16■□□□□ 0.18
FAM228B-207ENST00000611917 ALDH1B1P30837 517 aa16.15■□□□□ 0.18
FAM228B-207ENST00000611917 PARP10Q53GL7 1025 aa16.15■□□□□ 0.18
FAM228B-207ENST00000611917 GPBP1L1Q9HC44 474 aaPredicted RBP16.15■□□□□ 0.18
FAM228B-207ENST00000611917 HYPKQ9NX55 129 aa16.15■□□□□ 0.18
FAM228B-207ENST00000611917 SRGNP10124 158 aa16.14■□□□□ 0.17
FAM228B-207ENST00000611917 NPR1P16066 1061 aa16.14■□□□□ 0.17
FAM228B-207ENST00000611917 ZNF34Q8IZ26 560 aa16.14■□□□□ 0.17
FAM228B-207ENST00000611917 XAGE3Q8WTP9 111 aa16.14■□□□□ 0.17
FAM228B-207ENST00000611917 DLG5Q8TDM6 1919 aa16.13■□□□□ 0.17
FAM228B-207ENST00000611917 GPTP24298 496 aa16.13■□□□□ 0.17
FAM228B-207ENST00000611917 SOGA3Q5TF21 947 aa16.13■□□□□ 0.17
FAM228B-207ENST00000611917 C9orf131Q5VYM1 1079 aa16.13■□□□□ 0.17
FAM228B-207ENST00000611917 ANKRD13DQ6ZTN6 518 aa16.13■□□□□ 0.17
FAM228B-207ENST00000611917 FAM9BQ8IZU0 186 aa16.13■□□□□ 0.17
FAM228B-207ENST00000611917 KLRG2A4D1S0 409 aaPredicted RBP16.12■□□□□ 0.17
FAM228B-207ENST00000611917 ELL2O00472 640 aaPredicted RBP16.12■□□□□ 0.17
FAM228B-207ENST00000611917 ANXA1P04083 346 aa16.12■□□□□ 0.17
FAM228B-207ENST00000611917 KRT24Q2M2I5 525 aa16.12■□□□□ 0.17
FAM228B-207ENST00000611917 WWC1Q8IX03 1113 aa16.12■□□□□ 0.17
FAM228B-207ENST00000611917 C21orf2O43822 256 aa16.11■□□□□ 0.17
FAM228B-207ENST00000611917 TCIRG1Q13488 830 aa16.11■□□□□ 0.17
FAM228B-207ENST00000611917 PROSER3Q2NL68 480 aa16.11■□□□□ 0.17
FAM228B-207ENST00000611917 CCDC30Q5VVM6 783 aa16.11■□□□□ 0.17
FAM228B-207ENST00000611917 SUSD4Q5VX71 490 aa16.11■□□□□ 0.17
FAM228B-207ENST00000611917 WDR63Q8IWG1 891 aa16.11■□□□□ 0.17
FAM228B-207ENST00000611917 NLRP3Q96P20 1036 aa16.11■□□□□ 0.17
FAM228B-207ENST00000611917 UTP14AQ9BVJ6 771 aaKnown RBP16.11■□□□□ 0.17
FAM228B-207ENST00000611917 CHPF2Q9P2E5 772 aa16.11■□□□□ 0.17
FAM228B-207ENST00000611917 CHD4Q14839 1912 aa16.11■□□□□ 0.17
FAM228B-207ENST00000611917 LMNB1P20700 586 aa16.1■□□□□ 0.17
FAM228B-207ENST00000611917 LRP10Q7Z4F1 713 aa16.1■□□□□ 0.17
FAM228B-207ENST00000611917 PLBD2Q8NHP8 589 aa16.1■□□□□ 0.17
FAM228B-207ENST00000611917 RNF181Q9P0P0 153 aa16.1■□□□□ 0.17
FAM228B-207ENST00000611917 ZNF219Q9P2Y4 722 aaPredicted RBP16.1■□□□□ 0.17
FAM228B-207ENST00000611917 SALL2Q9Y467 1007 aaPredicted RBP16.1■□□□□ 0.17
FAM228B-207ENST00000611917 IL16Q14005 1332 aa16.1■□□□□ 0.17
FAM228B-207ENST00000611917 ERFEQ4G0M1 354 aa16.09■□□□□ 0.17
FAM228B-207ENST00000611917 SLC10A5Q5PT55 438 aa16.09■□□□□ 0.17
FAM228B-207ENST00000611917 NUTM1Q86Y26 1132 aa16.09■□□□□ 0.17
FAM228B-207ENST00000611917 ZNF526Q8TF50 670 aaPredicted RBP16.09■□□□□ 0.17
FAM228B-207ENST00000611917 RBM17Q96I25 401 aaKnown RBP16.09■□□□□ 0.17
FAM228B-207ENST00000611917 TMX4Q9H1E5 349 aaPredicted RBP16.09■□□□□ 0.17
FAM228B-207ENST00000611917 KIF13BQ9NQT8 1826 aa16.09■□□□□ 0.17
FAM228B-207ENST00000611917 RIC3Q7Z5B4 369 aa16.08■□□□□ 0.16
FAM228B-207ENST00000611917 C8orf58Q8NAV2 365 aa16.08■□□□□ 0.16
FAM228B-207ENST00000611917 RPGRQ92834 1020 aaKnown RBP16.08■□□□□ 0.16
FAM228B-207ENST00000611917 ATP10DQ9P241 1426 aa16.08■□□□□ 0.16
FAM228B-207ENST00000611917 DDX58O95786 925 aaKnown RBP16.07■□□□□ 0.16
FAM228B-207ENST00000611917 C1QTNF8P60827 252 aa16.07■□□□□ 0.16
FAM228B-207ENST00000611917 GOLGA2Q08379 1002 aa16.07■□□□□ 0.16
FAM228B-207ENST00000611917 DPY19L2Q6NUT2 758 aa16.07■□□□□ 0.16
FAM228B-207ENST00000611917 PRPF40BQ6NWY9 871 aaKnown RBP16.07■□□□□ 0.16
FAM228B-207ENST00000611917 RTKN2Q8IZC4 609 aa16.07■□□□□ 0.16
FAM228B-207ENST00000611917 STK31Q9BXU1 1019 aa16.07■□□□□ 0.16
FAM228B-207ENST00000611917 TRMT112Q9UI30 125 aaKnown RBP16.07■□□□□ 0.16
FAM228B-207ENST00000611917 KDM3BQ7LBC6 1761 aa16.07■□□□□ 0.16
FAM228B-207ENST00000611917 N4BP2Q86UW6 1770 aaPredicted RBP16.07■□□□□ 0.16
FAM228B-207ENST00000611917 RNF123Q5XPI4 1314 aa16.06■□□□□ 0.16
FAM228B-207ENST00000611917 KDM2BQ8NHM5 1336 aa16.06■□□□□ 0.16
FAM228B-207ENST00000611917 SENP3-EIF4A1A0A087X0R7 540 aa16.06■□□□□ 0.16
FAM228B-207ENST00000611917 GRIPAP1Q4V328 841 aa16.06■□□□□ 0.16
FAM228B-207ENST00000611917 CC2D2BQ6DHV5 1058 aa16.06■□□□□ 0.16
FAM228B-207ENST00000611917 NLRP10Q86W26 655 aa16.06■□□□□ 0.16
FAM228B-207ENST00000611917 NTSR2O95665 410 aa16.05■□□□□ 0.16
FAM228B-207ENST00000611917 HSP90B1P14625 803 aaKnown RBP16.05■□□□□ 0.16
FAM228B-207ENST00000611917 HOXA10P31260 410 aaPredicted RBP16.05■□□□□ 0.16
FAM228B-207ENST00000611917 TRIM28Q13263 835 aaKnown RBP16.05■□□□□ 0.16
FAM228B-207ENST00000611917 UBN2Q6ZU65 1347 aa16.04■□□□□ 0.16
FAM228B-207ENST00000611917 CCDC93Q567U6 631 aa16.04■□□□□ 0.16
FAM228B-207ENST00000611917 TSR2Q969E8 191 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms