RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 THUMPD2Q9BTF0 503 aaKnown RBP28.65■■■□□ 2.18
CBWD3-207ENST00000611426 KDM2BQ8NHM5 1336 aa28.65■■■□□ 2.18
CBWD3-207ENST00000611426 CCER2I3L3R5 266 aa28.63■■■□□ 2.17
CBWD3-207ENST00000611426 LMNB1P20700 586 aa28.63■■■□□ 2.17
CBWD3-207ENST00000611426 NBPF5PQ86XG9 351 aaPredicted RBP28.63■■■□□ 2.17
CBWD3-207ENST00000611426 ZNF219Q9P2Y4 722 aaPredicted RBP28.62■■■□□ 2.17
CBWD3-207ENST00000611426 KDM3BQ7LBC6 1761 aa28.61■■■□□ 2.17
CBWD3-207ENST00000611426 RGL2O15211 777 aa28.61■■■□□ 2.17
CBWD3-207ENST00000611426 EIF4A1P60842 406 aaKnown RBP28.61■■■□□ 2.17
CBWD3-207ENST00000611426 C16orf71Q8IYS4 520 aaPredicted RBP28.61■■■□□ 2.17
CBWD3-207ENST00000611426 NIP7Q9Y221 180 aaKnown RBP eCLIP28.61■■■□□ 2.17
CBWD3-207ENST00000611426 C21orf2O43822 256 aa28.6■■■□□ 2.17
CBWD3-207ENST00000611426 PRELPP51888 382 aa28.6■■■□□ 2.17
CBWD3-207ENST00000611426 COL11A2P13942 1736 aaPredicted RBP28.59■■■□□ 2.17
CBWD3-207ENST00000611426 ZC3H4Q9UPT8 1303 aaKnown RBP28.59■■■□□ 2.17
CBWD3-207ENST00000611426 NFKBIEO00221 500 aa28.59■■■□□ 2.17
CBWD3-207ENST00000611426 STYK1Q6J9G0 422 aa28.59■■■□□ 2.17
CBWD3-207ENST00000611426 NGEFQ8N5V2 710 aa28.59■■■□□ 2.17
CBWD3-207ENST00000611426 CNKSR1Q969H4 720 aa28.59■■■□□ 2.17
CBWD3-207ENST00000611426 RRAGCQ9HB90 399 aa28.59■■■□□ 2.17
CBWD3-207ENST00000611426 LAMB4A4D0S4 1761 aa28.59■■■□□ 2.17
CBWD3-207ENST00000611426 SRGNP10124 158 aa28.58■■■□□ 2.17
CBWD3-207ENST00000611426 RIPK4P57078 832 aa28.58■■■□□ 2.17
CBWD3-207ENST00000611426 TPTE2Q6XPS3 522 aa28.58■■■□□ 2.17
CBWD3-207ENST00000611426 HLFQ16534 295 aa28.57■■■□□ 2.16
CBWD3-207ENST00000611426 MASTLQ96GX5 879 aa28.57■■■□□ 2.16
CBWD3-207ENST00000611426 RRP7AQ9Y3A4 280 aaKnown RBP28.57■■■□□ 2.16
CBWD3-207ENST00000611426 CCDC88AQ3V6T2 1871 aa28.56■■■□□ 2.16
CBWD3-207ENST00000611426 MYBBP1AQ9BQG0 1328 aaKnown RBP28.56■■■□□ 2.16
CBWD3-207ENST00000611426 FAM177BA6PVY3 158 aa28.55■■■□□ 2.16
CBWD3-207ENST00000611426 RBM46Q8TBY0 533 aaKnown RBP28.55■■■□□ 2.16
CBWD3-207ENST00000611426 TSPYL4Q9UJ04 414 aa28.54■■■□□ 2.16
CBWD3-207ENST00000611426 MYL6BP14649 208 aa28.53■■■□□ 2.16
CBWD3-207ENST00000611426 PRPF40BQ6NWY9 871 aaKnown RBP28.53■■■□□ 2.16
CBWD3-207ENST00000611426 GLTPD2A6NH11 291 aa28.52■■■□□ 2.16
CBWD3-207ENST00000611426 TMPOP42166 694 aaKnown RBP28.52■■■□□ 2.16
CBWD3-207ENST00000611426 PRKRIP1Q9H875 184 aaPredicted RBP28.52■■■□□ 2.16
CBWD3-207ENST00000611426 SLX4Q8IY92 1834 aa28.52■■■□□ 2.16
CBWD3-207ENST00000611426 ERVV-1B6SEH8 477 aa28.51■■■□□ 2.16
CBWD3-207ENST00000611426 GTF2E1P29083 439 aaPredicted RBP28.51■■■□□ 2.16
CBWD3-207ENST00000611426 APLP1P51693 650 aa28.51■■■□□ 2.16
CBWD3-207ENST00000611426 LMOD3Q0VAK6 560 aa28.51■■■□□ 2.16
CBWD3-207ENST00000611426 KIF6Q6ZMV9 814 aa28.51■■■□□ 2.16
CBWD3-207ENST00000611426 TNRC6CQ9HCJ0 1690 aaKnown RBP28.51■■■□□ 2.15
CBWD3-207ENST00000611426 CACNA1SQ13698 1873 aa28.51■■■□□ 2.15
CBWD3-207ENST00000611426 NPR1P16066 1061 aa28.5■■■□□ 2.15
CBWD3-207ENST00000611426 SOGA3Q5TF21 947 aa28.5■■■□□ 2.15
CBWD3-207ENST00000611426 FER1L6Q2WGJ9 1857 aa28.5■■■□□ 2.15
CBWD3-207ENST00000611426 MAP3K15Q6ZN16 1313 aa28.5■■■□□ 2.15
CBWD3-207ENST00000611426 TTLL7Q6ZT98 887 aa28.5■■■□□ 2.15
CBWD3-207ENST00000611426 TAOK3Q9H2K8 898 aa28.5■■■□□ 2.15
CBWD3-207ENST00000611426 KLRG2A4D1S0 409 aaPredicted RBP28.49■■■□□ 2.15
CBWD3-207ENST00000611426 ERFEQ4G0M1 354 aa28.49■■■□□ 2.15
CBWD3-207ENST00000611426 CCDC146Q8IYE0 955 aa28.49■■■□□ 2.15
CBWD3-207ENST00000611426 TIAM2Q8IVF5 1701 aa28.48■■■□□ 2.15
CBWD3-207ENST00000611426 FSTL1Q12841 308 aa28.48■■■□□ 2.15
CBWD3-207ENST00000611426 BABAM1Q9NWV8 329 aa28.48■■■□□ 2.15
CBWD3-207ENST00000611426 LTBP3Q9NS15 1303 aa28.47■■■□□ 2.15
CBWD3-207ENST00000611426 VEGFAP15692 232 aaPredicted RBP28.47■■■□□ 2.15
CBWD3-207ENST00000611426 WDR43Q15061 677 aaKnown RBP eCLIP28.47■■■□□ 2.15
CBWD3-207ENST00000611426 NEUROD2Q15784 382 aa28.47■■■□□ 2.15
CBWD3-207ENST00000611426 DPY19L2Q6NUT2 758 aa28.47■■■□□ 2.15
CBWD3-207ENST00000611426 NYXQ9GZU5 481 aa28.47■■■□□ 2.15
CBWD3-207ENST00000611426 ERBB4Q15303 1308 aa28.46■■■□□ 2.15
CBWD3-207ENST00000611426 NUP98P52948 1817 aa28.46■■■□□ 2.15
CBWD3-207ENST00000611426 ZBTB3Q9H5J0 574 aa28.46■■■□□ 2.15
CBWD3-207ENST00000611426 ARFGEF2Q9Y6D5 1785 aa28.45■■■□□ 2.15
CBWD3-207ENST00000611426 EIF2S2P20042 333 aaKnown RBP28.45■■■□□ 2.14
CBWD3-207ENST00000611426 C7orf43Q8WVR3 580 aa28.44■■■□□ 2.14
CBWD3-207ENST00000611426 RUNDC1Q96C34 613 aa28.44■■■□□ 2.14
CBWD3-207ENST00000611426 DICER1Q9UPY3 1922 aaKnown RBP28.44■■■□□ 2.14
CBWD3-207ENST00000611426 GPTP24298 496 aa28.43■■■□□ 2.14
CBWD3-207ENST00000611426 NUTM1Q86Y26 1132 aa28.43■■■□□ 2.14
CBWD3-207ENST00000611426 ALDH1B1P30837 517 aa28.42■■■□□ 2.14
CBWD3-207ENST00000611426 CCDC93Q567U6 631 aa28.42■■■□□ 2.14
CBWD3-207ENST00000611426 SMC1BQ8NDV3 1235 aa28.41■■■□□ 2.14
CBWD3-207ENST00000611426 ADAMTS8Q9UP79 889 aa28.4■■■□□ 2.14
CBWD3-207ENST00000611426 PDIA6Q15084 440 aa28.39■■■□□ 2.14
CBWD3-207ENST00000611426 GIGYF2Q6Y7W6 1299 aaKnown RBP28.39■■■□□ 2.14
CBWD3-207ENST00000611426 SUSD4Q5VX71 490 aa28.38■■■□□ 2.13
CBWD3-207ENST00000611426 ZNF34Q8IZ26 560 aa28.38■■■□□ 2.13
CBWD3-207ENST00000611426 LAS1LQ9Y4W2 734 aaKnown RBP28.38■■■□□ 2.13
CBWD3-207ENST00000611426 UBN2Q6ZU65 1347 aa28.38■■■□□ 2.13
CBWD3-207ENST00000611426 ABCC12Q96J65 1359 aa28.37■■■□□ 2.13
CBWD3-207ENST00000611426 TRIM35Q9UPQ4 493 aa28.37■■■□□ 2.13
CBWD3-207ENST00000611426 POTECB2RU33 542 aa28.37■■■□□ 2.13
CBWD3-207ENST00000611426 CHL1O00533 1208 aa28.37■■■□□ 2.13
CBWD3-207ENST00000611426 ANXA1P04083 346 aa28.37■■■□□ 2.13
CBWD3-207ENST00000611426 PROSER3Q2NL68 480 aa28.37■■■□□ 2.13
CBWD3-207ENST00000611426 CRY2Q49AN0 593 aa28.37■■■□□ 2.13
CBWD3-207ENST00000611426 OLFM4Q6UX06 510 aa28.37■■■□□ 2.13
CBWD3-207ENST00000611426 LRP10Q7Z4F1 713 aa28.37■■■□□ 2.13
CBWD3-207ENST00000611426 RTKN2Q8IZC4 609 aa28.37■■■□□ 2.13
CBWD3-207ENST00000611426 DNAJC5GQ8N7S2 189 aa28.37■■■□□ 2.13
CBWD3-207ENST00000611426 NECTIN2Q92692 538 aa28.37■■■□□ 2.13
CBWD3-207ENST00000611426 IBTKQ9P2D0 1353 aaPredicted RBP28.36■■■□□ 2.13
CBWD3-207ENST00000611426 FKBP4Q02790 459 aaKnown RBP eCLIP28.36■■■□□ 2.13
CBWD3-207ENST00000611426 PPP1R42Q7Z4L9 355 aa28.36■■■□□ 2.13
CBWD3-207ENST00000611426 WDR90Q96KV7 1748 aa28.35■■■□□ 2.13
CBWD3-207ENST00000611426 RPGRQ92834 1020 aaKnown RBP28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms