RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 ANKRD31Q8N7Z5 1873 aa22.83■■□□□ 1.24
PRKN-208ENST00000610470 BABAM1Q9NWV8 329 aa22.81■■□□□ 1.24
PRKN-208ENST00000610470 NIP7Q9Y221 180 aaKnown RBP eCLIP22.81■■□□□ 1.24
PRKN-208ENST00000610470 RASSF7Q02833 373 aa22.8■■□□□ 1.24
PRKN-208ENST00000610470 LMNB1P20700 586 aa22.79■■□□□ 1.24
PRKN-208ENST00000610470 STYK1Q6J9G0 422 aa22.79■■□□□ 1.24
PRKN-208ENST00000610470 TPTE2Q6XPS3 522 aa22.79■■□□□ 1.24
PRKN-208ENST00000610470 CCDC146Q8IYE0 955 aa22.79■■□□□ 1.24
PRKN-208ENST00000610470 NGEFQ8N5V2 710 aa22.79■■□□□ 1.24
PRKN-208ENST00000610470 CNKSR1Q969H4 720 aa22.79■■□□□ 1.24
PRKN-208ENST00000610470 RUNDC1Q96C34 613 aa22.79■■□□□ 1.24
PRKN-208ENST00000610470 RRP7AQ9Y3A4 280 aaKnown RBP22.79■■□□□ 1.24
PRKN-208ENST00000610470 KDM2BQ8NHM5 1336 aa22.79■■□□□ 1.24
PRKN-208ENST00000610470 ERVV-1B6SEH8 477 aa22.78■■□□□ 1.24
PRKN-208ENST00000610470 KIF6Q6ZMV9 814 aa22.78■■□□□ 1.24
PRKN-208ENST00000610470 MASTLQ96GX5 879 aa22.78■■□□□ 1.24
PRKN-208ENST00000610470 PRKRIP1Q9H875 184 aaPredicted RBP22.78■■□□□ 1.24
PRKN-208ENST00000610470 ERBB4Q15303 1308 aa22.78■■□□□ 1.24
PRKN-208ENST00000610470 ZC3H4Q9UPT8 1303 aaKnown RBP22.78■■□□□ 1.24
PRKN-208ENST00000610470 SBF1O95248 1867 aa22.77■■□□□ 1.24
PRKN-208ENST00000610470 COL11A2P13942 1736 aaPredicted RBP22.77■■□□□ 1.24
PRKN-208ENST00000610470 SRGNP10124 158 aa22.77■■□□□ 1.24
PRKN-208ENST00000610470 HLFQ16534 295 aa22.77■■□□□ 1.24
PRKN-208ENST00000610470 NMRK2Q9NPI5 230 aa22.77■■□□□ 1.24
PRKN-208ENST00000610470 MYL6BP14649 208 aa22.76■■□□□ 1.23
PRKN-208ENST00000610470 NEUROD2Q15784 382 aa22.76■■□□□ 1.23
PRKN-208ENST00000610470 MAP3K15Q6ZN16 1313 aa22.76■■□□□ 1.23
PRKN-208ENST00000610470 C21orf2O43822 256 aa22.75■■□□□ 1.23
PRKN-208ENST00000610470 TOMM70O94826 608 aa22.75■■□□□ 1.23
PRKN-208ENST00000610470 FAM177BA6PVY3 158 aa22.74■■□□□ 1.23
PRKN-208ENST00000610470 NFKBIEO00221 500 aa22.74■■□□□ 1.23
PRKN-208ENST00000610470 HSPA6P17066 643 aa22.74■■□□□ 1.23
PRKN-208ENST00000610470 ZNF219Q9P2Y4 722 aaPredicted RBP22.74■■□□□ 1.23
PRKN-208ENST00000610470 ADAMTS8Q9UP79 889 aa22.74■■□□□ 1.23
PRKN-208ENST00000610470 GTF2E1P29083 439 aaPredicted RBP22.73■■□□□ 1.23
PRKN-208ENST00000610470 SOGA3Q5TF21 947 aa22.73■■□□□ 1.23
PRKN-208ENST00000610470 PRPF40BQ6NWY9 871 aaKnown RBP22.73■■□□□ 1.23
PRKN-208ENST00000610470 TTLL7Q6ZT98 887 aa22.73■■□□□ 1.23
PRKN-208ENST00000610470 NYXQ9GZU5 481 aa22.73■■□□□ 1.23
PRKN-208ENST00000610470 KLRG2A4D1S0 409 aaPredicted RBP22.72■■□□□ 1.23
PRKN-208ENST00000610470 NPR1P16066 1061 aa22.72■■□□□ 1.23
PRKN-208ENST00000610470 EIF2S2P20042 333 aaKnown RBP22.72■■□□□ 1.23
PRKN-208ENST00000610470 PRELPP51888 382 aa22.72■■□□□ 1.23
PRKN-208ENST00000610470 C16orf71Q8IYS4 520 aaPredicted RBP22.72■■□□□ 1.23
PRKN-208ENST00000610470 ZEB1P37275 1124 aaPredicted RBP22.71■■□□□ 1.23
PRKN-208ENST00000610470 ZBTB3Q9H5J0 574 aa22.71■■□□□ 1.23
PRKN-208ENST00000610470 TRIM35Q9UPQ4 493 aa22.7■■□□□ 1.22
PRKN-208ENST00000610470 LTBP3Q9NS15 1303 aa22.69■■□□□ 1.22
PRKN-208ENST00000610470 CHL1O00533 1208 aa22.69■■□□□ 1.22
PRKN-208ENST00000610470 TAOK3Q9H2K8 898 aa22.69■■□□□ 1.22
PRKN-208ENST00000610470 RRAGCQ9HB90 399 aa22.69■■□□□ 1.22
PRKN-208ENST00000610470 NUP98P52948 1817 aa22.68■■□□□ 1.22
PRKN-208ENST00000610470 SLX4Q8IY92 1834 aa22.68■■□□□ 1.22
PRKN-208ENST00000610470 ARFGEF2Q9Y6D5 1785 aa22.68■■□□□ 1.22
PRKN-208ENST00000610470 GLTPD2A6NH11 291 aa22.68■■□□□ 1.22
PRKN-208ENST00000610470 RBM46Q8TBY0 533 aaKnown RBP22.68■■□□□ 1.22
PRKN-208ENST00000610470 LAS1LQ9Y4W2 734 aaKnown RBP22.68■■□□□ 1.22
PRKN-208ENST00000610470 IBTKQ9P2D0 1353 aaPredicted RBP22.67■■□□□ 1.22
PRKN-208ENST00000610470 FER1L6Q2WGJ9 1857 aa22.67■■□□□ 1.22
PRKN-208ENST00000610470 GPTP24298 496 aa22.67■■□□□ 1.22
PRKN-208ENST00000610470 PDIA6Q15084 440 aa22.67■■□□□ 1.22
PRKN-208ENST00000610470 GIGYF2Q6Y7W6 1299 aaKnown RBP22.67■■□□□ 1.22
PRKN-208ENST00000610470 TNRC6CQ9HCJ0 1690 aaKnown RBP22.67■■□□□ 1.22
PRKN-208ENST00000610470 CEP350Q5VT06 3117 aa22.66■■□□□ 1.22
PRKN-208ENST00000610470 ALDH1B1P30837 517 aa22.66■■□□□ 1.22
PRKN-208ENST00000610470 ERFEQ4G0M1 354 aa22.66■■□□□ 1.22
PRKN-208ENST00000610470 CCDC93Q567U6 631 aa22.66■■□□□ 1.22
PRKN-208ENST00000610470 LRP10Q7Z4F1 713 aa22.66■■□□□ 1.22
PRKN-208ENST00000610470 NUTM1Q86Y26 1132 aa22.66■■□□□ 1.22
PRKN-208ENST00000610470 ZNF34Q8IZ26 560 aa22.66■■□□□ 1.22
PRKN-208ENST00000610470 CACNA1SQ13698 1873 aa22.66■■□□□ 1.22
PRKN-208ENST00000610470 CCDC88AQ3V6T2 1871 aa22.66■■□□□ 1.22
PRKN-208ENST00000610470 TIAM2Q8IVF5 1701 aa22.65■■□□□ 1.22
PRKN-208ENST00000610470 UBN2Q6ZU65 1347 aa22.65■■□□□ 1.22
PRKN-208ENST00000610470 C7orf43Q8WVR3 580 aa22.65■■□□□ 1.22
PRKN-208ENST00000610470 ABCC12Q96J65 1359 aa22.64■■□□□ 1.22
PRKN-208ENST00000610470 PROSER3Q2NL68 480 aa22.64■■□□□ 1.21
PRKN-208ENST00000610470 PARP10Q53GL7 1025 aa22.64■■□□□ 1.21
PRKN-208ENST00000610470 SUSD4Q5VX71 490 aa22.64■■□□□ 1.21
PRKN-208ENST00000610470 DPY19L2Q6NUT2 758 aa22.64■■□□□ 1.21
PRKN-208ENST00000610470 PPP1R42Q7Z4L9 355 aa22.64■■□□□ 1.21
PRKN-208ENST00000610470 ANXA1P04083 346 aa22.63■■□□□ 1.21
PRKN-208ENST00000610470 CRY2Q49AN0 593 aa22.63■■□□□ 1.21
PRKN-208ENST00000610470 NECTIN2Q92692 538 aa22.63■■□□□ 1.21
PRKN-208ENST00000610470 CFAP44Q96MT7 982 aa22.63■■□□□ 1.21
PRKN-208ENST00000610470 RIC1Q4ADV7 1423 aa22.63■■□□□ 1.21
PRKN-208ENST00000610470 HOXB7P09629 217 aa22.62■■□□□ 1.21
PRKN-208ENST00000610470 VEGFAP15692 232 aaPredicted RBP22.62■■□□□ 1.21
PRKN-208ENST00000610470 APLP1P51693 650 aa22.62■■□□□ 1.21
PRKN-208ENST00000610470 FSTL1Q12841 308 aa22.62■■□□□ 1.21
PRKN-208ENST00000610470 DDX21Q9NR30 783 aaKnown RBP eCLIP22.62■■□□□ 1.21
PRKN-208ENST00000610470 DICER1Q9UPY3 1922 aaKnown RBP22.61■■□□□ 1.21
PRKN-208ENST00000610470 NTSR2O95665 410 aa22.61■■□□□ 1.21
PRKN-208ENST00000610470 KRT24Q2M2I5 525 aa22.61■■□□□ 1.21
PRKN-208ENST00000610470 HSP90AB3PQ58FF7 597 aa22.61■■□□□ 1.21
PRKN-208ENST00000610470 COPS6Q7L5N1 327 aa22.61■■□□□ 1.21
PRKN-208ENST00000610470 RTKN2Q8IZC4 609 aa22.61■■□□□ 1.21
PRKN-208ENST00000610470 APAF1O14727 1248 aa22.6■■□□□ 1.21
PRKN-208ENST00000610470 FKBP4Q02790 459 aaKnown RBP eCLIP22.6■■□□□ 1.21
PRKN-208ENST00000610470 CALD1Q05682 793 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms