RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 FTOQ9C0B1 505 aaKnown RBP eCLIP7.72□□□□□ -1.17
RPF2-204ENST00000607388 DNAJC25Q9H1X3 360 aa7.72□□□□□ -1.17
RPF2-204ENST00000607388 NOL7Q9UMY1 257 aaKnown RBP7.72□□□□□ -1.17
RPF2-204ENST00000607388 U2AF2P26368 475 aaKnown RBP eCLIP7.71□□□□□ -1.17
RPF2-204ENST00000607388 OTUD7BQ6GQQ9 843 aa7.71□□□□□ -1.17
RPF2-204ENST00000607388 SASS6Q6UVJ0 657 aa7.71□□□□□ -1.17
RPF2-204ENST00000607388 PAXIP1Q6ZW49 1069 aaPredicted RBP7.71□□□□□ -1.17
RPF2-204ENST00000607388 SPATA32Q96LK8 384 aa7.71□□□□□ -1.17
RPF2-204ENST00000607388 SEC62Q99442 399 aaKnown RBP7.71□□□□□ -1.17
RPF2-204ENST00000607388 PRR36Q9H6K5 1346 aa7.71□□□□□ -1.17
RPF2-204ENST00000607388 JAK2O60674 1132 aa7.71□□□□□ -1.18
RPF2-204ENST00000607388 HMGB1P09429 215 aaKnown RBP7.71□□□□□ -1.18
RPF2-204ENST00000607388 PROSER3Q2NL68 480 aa7.71□□□□□ -1.18
RPF2-204ENST00000607388 IL17REQ8NFR9 667 aa7.71□□□□□ -1.18
RPF2-204ENST00000607388 PYCARDQ9ULZ3 195 aa7.71□□□□□ -1.18
RPF2-204ENST00000607388 LIMCH1Q9UPQ0 1083 aa7.71□□□□□ -1.18
RPF2-204ENST00000607388 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.71□□□□□ -1.18
RPF2-204ENST00000607388 SNX14Q9Y5W7 946 aa7.71□□□□□ -1.18
RPF2-204ENST00000607388 ZSCAN22P10073 491 aaPredicted RBP7.71□□□□□ -1.18
RPF2-204ENST00000607388 LIG1P18858 919 aa7.71□□□□□ -1.18
RPF2-204ENST00000607388 ATP8B2P98198 1209 aa7.71□□□□□ -1.18
RPF2-204ENST00000607388 POLR3DP05423 398 aaPredicted RBP7.7□□□□□ -1.18
RPF2-204ENST00000607388 ZNF445P59923 1031 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 GNL2Q13823 731 aaKnown RBP7.7□□□□□ -1.18
RPF2-204ENST00000607388 CSPP1Q1MSJ5 1256 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 TTLL5Q6EMB2 1281 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 BLOC1S2Q6QNY1 142 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 CDC37L1Q7L3B6 337 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 SDF4Q9BRK5 362 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 TLR7Q9NYK1 1049 aaKnown RBP7.7□□□□□ -1.18
RPF2-204ENST00000607388 TAF6LQ9Y6J9 622 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 METP08581 1390 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 ANO6Q4KMQ2 910 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 RUFY3Q7L099 469 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 CCDC144CPQ8IYA2 1237 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 DNAAF4Q8WXU2 420 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 DDX17Q92841 729 aaKnown RBP7.7□□□□□ -1.18
RPF2-204ENST00000607388 NUP62CLQ9H1M0 184 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 ISY1Q9ULR0 285 aaKnown RBP7.7□□□□□ -1.18
RPF2-204ENST00000607388 KIF3AQ9Y496 699 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 RBM8AQ9Y5S9 174 aaKnown RBP7.7□□□□□ -1.18
RPF2-204ENST00000607388 BRD1O95696 1058 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 APPP05067 770 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 ME1P48163 572 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 FKBP4Q02790 459 aaKnown RBP eCLIP7.7□□□□□ -1.18
RPF2-204ENST00000607388 ARID5BQ14865 1188 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 WASHC4Q2M389 1173 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 CCDC183Q5T5S1 534 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 GPATCH3Q96I76 525 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 PPP1R9BQ96SB3 815 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 NCOA5Q9HCD5 579 aaKnown RBP7.7□□□□□ -1.18
RPF2-204ENST00000607388 TRPM2O94759 1503 aa7.7□□□□□ -1.18
RPF2-204ENST00000607388 ZNF853P0CG23 659 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 DDIT3P35638 169 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 HDGFP51858 240 aaKnown RBP7.69□□□□□ -1.18
RPF2-204ENST00000607388 NMIQ13287 307 aaPredicted RBP7.69□□□□□ -1.18
RPF2-204ENST00000607388 CABLES1Q8TDN4 633 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 KIF1BPQ96EK5 621 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 F13A1P00488 732 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 CCDC192P0DO97 292 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 RXRAP19793 462 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 KRT85P78386 507 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 ME3Q16798 604 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 LARP1Q6PKG0 1096 aaKnown RBP7.69□□□□□ -1.18
RPF2-204ENST00000607388 PDCL2Q8N4E4 241 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 RUFY2Q8WXA3 655 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 MYD88Q99836 296 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 ATP6V1DQ9Y5K8 247 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 NSD2O96028 1365 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 AGLP35573 1532 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 IQGAP3Q86VI3 1631 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 MROH1Q8NDA8 1641 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 SMC2O95347 1197 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 CHRNA2Q15822 529 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 BRF1Q92994 677 aa7.69□□□□□ -1.18
RPF2-204ENST00000607388 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.69□□□□□ -1.18
RPF2-204ENST00000607388 RIOK3O14730 519 aaKnown RBP7.68□□□□□ -1.18
RPF2-204ENST00000607388 UBE3BQ7Z3V4 1068 aa7.68□□□□□ -1.18
RPF2-204ENST00000607388 HOMER1Q86YM7 354 aa7.68□□□□□ -1.18
RPF2-204ENST00000607388 MTMR7Q9Y216 660 aa7.68□□□□□ -1.18
RPF2-204ENST00000607388 ZNF335Q9H4Z2 1342 aaPredicted RBP7.68□□□□□ -1.18
RPF2-204ENST00000607388 USP16Q9Y5T5 823 aa7.68□□□□□ -1.18
RPF2-204ENST00000607388 PTPRCP08575 1304 aa7.68□□□□□ -1.18
RPF2-204ENST00000607388 GOLGA6L6A8MZA4 724 aa7.67□□□□□ -1.18
RPF2-204ENST00000607388 MCM2P49736 904 aa7.67□□□□□ -1.18
RPF2-204ENST00000607388 ZNF165P49910 485 aa7.67□□□□□ -1.18
RPF2-204ENST00000607388 MAP3K11Q16584 847 aa7.67□□□□□ -1.18
RPF2-204ENST00000607388 PIBF1Q8WXW3 757 aa7.67□□□□□ -1.18
RPF2-204ENST00000607388 TNNT1P13805 278 aa7.67□□□□□ -1.18
RPF2-204ENST00000607388 PROSER2Q86WR7 435 aaPredicted RBP7.67□□□□□ -1.18
RPF2-204ENST00000607388 GJB4Q9NTQ9 266 aa7.67□□□□□ -1.18
RPF2-204ENST00000607388 KCNA6P17658 529 aa7.67□□□□□ -1.18
RPF2-204ENST00000607388 PIP4K2BP78356 416 aa7.67□□□□□ -1.18
RPF2-204ENST00000607388 TTC6Q86TZ1 520 aa7.67□□□□□ -1.18
RPF2-204ENST00000607388 ZSWIM4Q9H7M6 989 aa7.67□□□□□ -1.18
RPF2-204ENST00000607388 TPCN1Q9ULQ1 816 aa7.67□□□□□ -1.18
RPF2-204ENST00000607388 EFCAB6Q5THR3 1501 aa7.67□□□□□ -1.18
RPF2-204ENST00000607388 TULP4Q9NRJ4 1543 aa7.67□□□□□ -1.18
RPF2-204ENST00000607388 FER1L4A9Z1Z3 1794 aa7.67□□□□□ -1.18
RPF2-204ENST00000607388 GOLIM4O00461 696 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms