RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 GIMAP6Q6P9H5 292 aa14.93□□□□□ -0.02
MSH6-212ENST00000607272 RUFY2Q8WXA3 655 aa14.93□□□□□ -0.02
MSH6-212ENST00000607272 HYPKQ9NX55 129 aa14.93□□□□□ -0.02
MSH6-212ENST00000607272 MAP3K5Q99683 1374 aa14.93□□□□□ -0.02
MSH6-212ENST00000607272 ROBO2Q9HCK4 1378 aa14.93□□□□□ -0.02
MSH6-212ENST00000607272 ZBTB7CA1YPR0 619 aa14.92□□□□□ -0.02
MSH6-212ENST00000607272 MAP4K4O95819 1239 aaPredicted RBP14.92□□□□□ -0.02
MSH6-212ENST00000607272 CCDC192P0DO97 292 aa14.92□□□□□ -0.02
MSH6-212ENST00000607272 TRHP20396 242 aaPredicted RBP14.92□□□□□ -0.02
MSH6-212ENST00000607272 CASTP20810 708 aaKnown RBP14.92□□□□□ -0.02
MSH6-212ENST00000607272 UTP14CQ5TAP6 766 aaKnown RBP14.92□□□□□ -0.02
MSH6-212ENST00000607272 VPS53Q5VIR6 699 aa14.92□□□□□ -0.02
MSH6-212ENST00000607272 NECTIN2Q92692 538 aa14.92□□□□□ -0.02
MSH6-212ENST00000607272 GJB2P29033 226 aa14.92□□□□□ -0.02
MSH6-212ENST00000607272 C17orf53Q8N3J3 647 aaPredicted RBP14.92□□□□□ -0.02
MSH6-212ENST00000607272 TM6SF1Q9BZW5 370 aa14.92□□□□□ -0.02
MSH6-212ENST00000607272 MTMR6Q9Y217 621 aa14.92□□□□□ -0.02
MSH6-212ENST00000607272 AMPHP49418 695 aa14.91□□□□□ -0.02
MSH6-212ENST00000607272 DNM1Q05193 864 aaKnown RBP14.91□□□□□ -0.02
MSH6-212ENST00000607272 TAF7Q15545 349 aaPredicted RBP14.91□□□□□ -0.02
MSH6-212ENST00000607272 CWC27Q6UX04 472 aaKnown RBP14.91□□□□□ -0.02
MSH6-212ENST00000607272 TTC41PQ6P2S7 1318 aa14.91□□□□□ -0.02
MSH6-212ENST00000607272 USP42Q9H9J4 1324 aaKnown RBP14.91□□□□□ -0.02
MSH6-212ENST00000607272 FAM208AQ9UK61 1670 aaKnown RBP14.91□□□□□ -0.02
MSH6-212ENST00000607272 SRGAP3O43295 1099 aa14.9□□□□□ -0.02
MSH6-212ENST00000607272 GLRX3O76003 335 aaKnown RBP14.9□□□□□ -0.02
MSH6-212ENST00000607272 PLCD3Q8N3E9 789 aa14.9□□□□□ -0.02
MSH6-212ENST00000607272 PDRG1Q9NUG6 133 aa14.9□□□□□ -0.02
MSH6-212ENST00000607272 SPG7Q9UQ90 795 aa14.9□□□□□ -0.02
MSH6-212ENST00000607272 N4BP2Q86UW6 1770 aaPredicted RBP14.9□□□□□ -0.02
MSH6-212ENST00000607272 HDGFL1Q5TGJ6 251 aa14.89□□□□□ -0.03
MSH6-212ENST00000607272 CCDC83Q8IWF9 413 aa14.89□□□□□ -0.03
MSH6-212ENST00000607272 TSC1Q92574 1164 aa14.89□□□□□ -0.03
MSH6-212ENST00000607272 LARP6Q9BRS8 491 aaKnown RBP14.89□□□□□ -0.03
MSH6-212ENST00000607272 ZSWIM6Q9HCJ5 1215 aa14.89□□□□□ -0.03
MSH6-212ENST00000607272 CYP46A1Q9Y6A2 500 aa14.89□□□□□ -0.03
MSH6-212ENST00000607272 TOPAZ1Q8N9V7 1692 aa14.89□□□□□ -0.03
MSH6-212ENST00000607272 LRRC37A3O60309 1634 aa14.89□□□□□ -0.03
MSH6-212ENST00000607272 DMTNQ08495 405 aa14.89□□□□□ -0.03
MSH6-212ENST00000607272 JARID2Q92833 1246 aaPredicted RBP14.89□□□□□ -0.03
MSH6-212ENST00000607272 KCNB2Q92953 911 aa14.89□□□□□ -0.03
MSH6-212ENST00000607272 CHMP4AQ9BY43 222 aa14.89□□□□□ -0.03
MSH6-212ENST00000607272 BCL2L12Q9HB09 334 aa14.89□□□□□ -0.03
MSH6-212ENST00000607272 NUTM2FA1L443 756 aa14.88□□□□□ -0.03
MSH6-212ENST00000607272 AP5Z1O43299 807 aa14.88□□□□□ -0.03
MSH6-212ENST00000607272 IL17REQ8NFR9 667 aa14.88□□□□□ -0.03
MSH6-212ENST00000607272 FAM200AQ8TCP9 573 aa14.88□□□□□ -0.03
MSH6-212ENST00000607272 KCNF1Q9H3M0 494 aa14.88□□□□□ -0.03
MSH6-212ENST00000607272 CEP170BQ9Y4F5 1589 aaPredicted RBP14.88□□□□□ -0.03
MSH6-212ENST00000607272 LARGE1O95461 756 aa14.88□□□□□ -0.03
MSH6-212ENST00000607272 ZSCAN20P17040 1043 aaPredicted RBP14.88□□□□□ -0.03
MSH6-212ENST00000607272 JAKMIP1Q96N16 626 aaKnown RBP14.88□□□□□ -0.03
MSH6-212ENST00000607272 FMN2Q9NZ56 1722 aa14.87□□□□□ -0.03
MSH6-212ENST00000607272 ZKSCAN1P17029 563 aaPredicted RBP14.87□□□□□ -0.03
MSH6-212ENST00000607272 KRT85P78386 507 aa14.87□□□□□ -0.03
MSH6-212ENST00000607272 PPP4R3BQ5MIZ7 849 aa14.87□□□□□ -0.03
MSH6-212ENST00000607272 RNF25Q96BH1 459 aaPredicted RBP14.87□□□□□ -0.03
MSH6-212ENST00000607272 PHAXQ9H814 394 aaKnown RBP14.87□□□□□ -0.03
MSH6-212ENST00000607272 PYCARDQ9ULZ3 195 aa14.87□□□□□ -0.03
MSH6-212ENST00000607272 RIMS1Q86UR5 1692 aaKnown RBP14.87□□□□□ -0.03
MSH6-212ENST00000607272 ELP1O95163 1332 aa14.87□□□□□ -0.03
MSH6-212ENST00000607272 VPS37CA5D8V6 355 aaPredicted RBP14.86□□□□□ -0.03
MSH6-212ENST00000607272 CPA1P15085 419 aa14.86□□□□□ -0.03
MSH6-212ENST00000607272 PDCP20941 246 aa14.86□□□□□ -0.03
MSH6-212ENST00000607272 MAP3K11Q16584 847 aa14.86□□□□□ -0.03
MSH6-212ENST00000607272 PTPRUQ92729 1446 aa14.86□□□□□ -0.03
MSH6-212ENST00000607272 MLECQ14165 292 aa14.86□□□□□ -0.03
MSH6-212ENST00000607272 CLASRPQ8N2M8 674 aaKnown RBP14.86□□□□□ -0.03
MSH6-212ENST00000607272 PDCL2Q8N4E4 241 aa14.86□□□□□ -0.03
MSH6-212ENST00000607272 GPATCH3Q96I76 525 aa14.86□□□□□ -0.03
MSH6-212ENST00000607272 GTPBP4Q9BZE4 634 aaKnown RBP14.86□□□□□ -0.03
MSH6-212ENST00000607272 PRDM10Q9NQV6 1147 aa14.86□□□□□ -0.03
MSH6-212ENST00000607272 CCDC171Q6TFL3 1326 aa14.86□□□□□ -0.03
MSH6-212ENST00000607272 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.85□□□□□ -0.03
MSH6-212ENST00000607272 CTIFO43310 598 aaKnown RBP14.85□□□□□ -0.03
MSH6-212ENST00000607272 NBPF7P0C2Y1 421 aaPredicted RBP14.85□□□□□ -0.03
MSH6-212ENST00000607272 PRPF40BQ6NWY9 871 aaKnown RBP14.85□□□□□ -0.03
MSH6-212ENST00000607272 SPC24Q8NBT2 197 aa14.85□□□□□ -0.03
MSH6-212ENST00000607272 NUP62CLQ9H1M0 184 aa14.85□□□□□ -0.03
MSH6-212ENST00000607272 TMEM2Q9UHN6 1383 aa14.85□□□□□ -0.03
MSH6-212ENST00000607272 RIOK3O14730 519 aaKnown RBP14.85□□□□□ -0.03
MSH6-212ENST00000607272 PTH1RQ03431 593 aa14.85□□□□□ -0.03
MSH6-212ENST00000607272 OS9Q13438 667 aaPredicted RBP14.85□□□□□ -0.03
MSH6-212ENST00000607272 ADCK5Q3MIX3 580 aa14.85□□□□□ -0.03
MSH6-212ENST00000607272 LARP1BQ659C4 914 aaKnown RBP14.85□□□□□ -0.03
MSH6-212ENST00000607272 ESF1Q9H501 851 aaKnown RBP14.85□□□□□ -0.03
MSH6-212ENST00000607272 GTPBP6O43824 516 aaPredicted RBP14.84□□□□□ -0.03
MSH6-212ENST00000607272 HOXB7P09629 217 aa14.84□□□□□ -0.03
MSH6-212ENST00000607272 NECTIN1Q15223 517 aa14.84□□□□□ -0.03
MSH6-212ENST00000607272 ME3Q16798 604 aa14.84□□□□□ -0.03
MSH6-212ENST00000607272 BEND3Q5T5X7 828 aa14.84□□□□□ -0.03
MSH6-212ENST00000607272 DNAAF4Q8WXU2 420 aa14.84□□□□□ -0.03
MSH6-212ENST00000607272 ANKRD7Q92527 254 aa14.84□□□□□ -0.03
MSH6-212ENST00000607272 ECHDC1Q9NTX5 307 aa14.84□□□□□ -0.03
MSH6-212ENST00000607272 CRYBG1Q9Y4K1 1723 aa14.84□□□□□ -0.03
MSH6-212ENST00000607272 PSMA5P28066 241 aa14.84□□□□□ -0.03
MSH6-212ENST00000607272 CBX1P83916 185 aa14.84□□□□□ -0.03
MSH6-212ENST00000607272 TYRO3Q06418 890 aa14.84□□□□□ -0.03
MSH6-212ENST00000607272 MTX1Q13505 466 aa14.84□□□□□ -0.03
MSH6-212ENST00000607272 EVI5LQ96CN4 794 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms