RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 CCDC184Q52MB2 194 aa13.11□□□□□ -0.31
CTSA-215ENST00000607187 RYDENQ9NUL5 291 aaKnown RBP13.11□□□□□ -0.31
CTSA-215ENST00000607187 STK24Q9Y6E0 443 aa13.11□□□□□ -0.31
CTSA-215ENST00000607187 SCN7AQ01118 1682 aa13.11□□□□□ -0.31
CTSA-215ENST00000607187 N4BP2Q86UW6 1770 aaPredicted RBP13.1□□□□□ -0.31
CTSA-215ENST00000607187 ANP32CO43423 234 aa13.1□□□□□ -0.31
CTSA-215ENST00000607187 TM4SF1P30408 202 aa13.1□□□□□ -0.31
CTSA-215ENST00000607187 EIF4A1P60842 406 aaKnown RBP13.1□□□□□ -0.31
CTSA-215ENST00000607187 NEUROD2Q15784 382 aa13.1□□□□□ -0.31
CTSA-215ENST00000607187 BCL2L12Q9HB09 334 aa13.1□□□□□ -0.31
CTSA-215ENST00000607187 BABAM1Q9NWV8 329 aa13.1□□□□□ -0.31
CTSA-215ENST00000607187 TRIM35Q9UPQ4 493 aa13.1□□□□□ -0.31
CTSA-215ENST00000607187 PARP3Q9Y6F1 533 aa13.1□□□□□ -0.31
CTSA-215ENST00000607187 BCORQ6W2J9 1755 aa13.09□□□□□ -0.31
CTSA-215ENST00000607187 GIGYF1O75420 1035 aaPredicted RBP13.09□□□□□ -0.31
CTSA-215ENST00000607187 CHRM1P11229 460 aaPredicted RBP13.09□□□□□ -0.31
CTSA-215ENST00000607187 BRCA1P38398 1863 aaKnown RBP13.09□□□□□ -0.31
CTSA-215ENST00000607187 DDR1Q08345 913 aa13.09□□□□□ -0.31
CTSA-215ENST00000607187 GPR162Q16538 588 aa13.09□□□□□ -0.31
CTSA-215ENST00000607187 C10orf71Q711Q0 1435 aa13.09□□□□□ -0.31
CTSA-215ENST00000607187 NRXN2Q9P2S2 1712 aa13.09□□□□□ -0.31
CTSA-215ENST00000607187 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.08□□□□□ -0.32
CTSA-215ENST00000607187 POLRMTO00411 1230 aaKnown RBP13.08□□□□□ -0.32
CTSA-215ENST00000607187 ZFP91Q96JP5 570 aaPredicted RBP13.08□□□□□ -0.32
CTSA-215ENST00000607187 TSPYL4Q9UJ04 414 aa13.08□□□□□ -0.32
CTSA-215ENST00000607187 NBPF26B4DH59 902 aa13.07□□□□□ -0.32
CTSA-215ENST00000607187 APAF1O14727 1248 aa13.07□□□□□ -0.32
CTSA-215ENST00000607187 YBX3P16989 372 aaKnown RBP eCLIP13.07□□□□□ -0.32
CTSA-215ENST00000607187 PIP4K2AP48426 406 aaPredicted RBP13.07□□□□□ -0.32
CTSA-215ENST00000607187 NFIXQ14938 502 aa13.07□□□□□ -0.32
CTSA-215ENST00000607187 NBPF10Q6P3W6 841 aaKnown RBP13.07□□□□□ -0.32
CTSA-215ENST00000607187 NBPF15Q8N660 670 aa13.07□□□□□ -0.32
CTSA-215ENST00000607187 TBC1D2BQ9UPU7 963 aa13.07□□□□□ -0.32
CTSA-215ENST00000607187 ZNF330Q9Y3S2 320 aaPredicted RBP13.07□□□□□ -0.32
CTSA-215ENST00000607187 PXDNLA1KZ92 1463 aa13.07□□□□□ -0.32
CTSA-215ENST00000607187 CHL1O00533 1208 aa13.06□□□□□ -0.32
CTSA-215ENST00000607187 TGFB2P61812 414 aa13.06□□□□□ -0.32
CTSA-215ENST00000607187 NPM2Q86SE8 214 aaKnown RBP13.06□□□□□ -0.32
CTSA-215ENST00000607187 PELP1Q8IZL8 1130 aaKnown RBP13.06□□□□□ -0.32
CTSA-215ENST00000607187 CAMTA2O94983 1202 aa13.05□□□□□ -0.32
CTSA-215ENST00000607187 DZIP3Q86Y13 1208 aaKnown RBP13.05□□□□□ -0.32
CTSA-215ENST00000607187 MRS2Q9HD23 443 aa13.05□□□□□ -0.32
CTSA-215ENST00000607187 NUP98P52948 1817 aa13.04□□□□□ -0.32
CTSA-215ENST00000607187 GRIN3BO60391 1043 aa13.04□□□□□ -0.32
CTSA-215ENST00000607187 YY1P25490 414 aa13.04□□□□□ -0.32
CTSA-215ENST00000607187 TBC1D9BQ66K14 1250 aa13.04□□□□□ -0.32
CTSA-215ENST00000607187 A0A0G2JLW4 131 aa13.03□□□□□ -0.32
CTSA-215ENST00000607187 SERPINB2P05120 415 aa13.03□□□□□ -0.32
CTSA-215ENST00000607187 DPEP1P16444 411 aa13.03□□□□□ -0.32
CTSA-215ENST00000607187 CLEC4GQ6UXB4 293 aa13.03□□□□□ -0.32
CTSA-215ENST00000607187 ARFGEF1Q9Y6D6 1849 aa13.03□□□□□ -0.32
CTSA-215ENST00000607187 ANKRD31Q8N7Z5 1873 aa13.02□□□□□ -0.32
CTSA-215ENST00000607187 KCNA3P22001 575 aa13.02□□□□□ -0.33
CTSA-215ENST00000607187 BICDL1Q6ZP65 573 aa13.02□□□□□ -0.33
CTSA-215ENST00000607187 LAS1LQ9Y4W2 734 aaKnown RBP13.02□□□□□ -0.33
CTSA-215ENST00000607187 ERBB4Q15303 1308 aa13.02□□□□□ -0.33
CTSA-215ENST00000607187 DLEC1Q9Y238 1755 aa13.02□□□□□ -0.33
CTSA-215ENST00000607187 ZNF853P0CG23 659 aa13.01□□□□□ -0.33
CTSA-215ENST00000607187 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
CTSA-215ENST00000607187 SETDB2Q96T68 719 aa13.01□□□□□ -0.33
CTSA-215ENST00000607187 CREBZFQ9NS37 354 aa13.01□□□□□ -0.33
CTSA-215ENST00000607187 WWC3Q9ULE0 1092 aa13.01□□□□□ -0.33
CTSA-215ENST00000607187 ZNF652Q9Y2D9 606 aa13.01□□□□□ -0.33
CTSA-215ENST00000607187 CARMIL3Q8ND23 1372 aa13.01□□□□□ -0.33
CTSA-215ENST00000607187 CALD1Q05682 793 aaKnown RBP13□□□□□ -0.33
CTSA-215ENST00000607187 RASEFQ8IZ41 740 aa13□□□□□ -0.33
CTSA-215ENST00000607187 IFT57Q9NWB7 429 aa13□□□□□ -0.33
CTSA-215ENST00000607187 MYL6BP14649 208 aa12.99□□□□□ -0.33
CTSA-215ENST00000607187 EIF2S2P20042 333 aaKnown RBP12.99□□□□□ -0.33
CTSA-215ENST00000607187 CHRNA5P30532 468 aa12.99□□□□□ -0.33
CTSA-215ENST00000607187 PDIA6Q15084 440 aa12.99□□□□□ -0.33
CTSA-215ENST00000607187 CCDC27Q2M243 656 aa12.99□□□□□ -0.33
CTSA-215ENST00000607187 KRT24Q2M2I5 525 aa12.99□□□□□ -0.33
CTSA-215ENST00000607187 LRP10Q7Z4F1 713 aa12.99□□□□□ -0.33
CTSA-215ENST00000607187 NGEFQ8N5V2 710 aa12.99□□□□□ -0.33
CTSA-215ENST00000607187 SPDYE1Q8NFV5 336 aaPredicted RBP12.99□□□□□ -0.33
CTSA-215ENST00000607187 MBIPQ9NS73 344 aa12.99□□□□□ -0.33
CTSA-215ENST00000607187 MAP3K15Q6ZN16 1313 aa12.98□□□□□ -0.33
CTSA-215ENST00000607187 ERVV-1B6SEH8 477 aa12.98□□□□□ -0.33
CTSA-215ENST00000607187 HOXB7P09629 217 aa12.98□□□□□ -0.33
CTSA-215ENST00000607187 GNAI1P63096 354 aa12.98□□□□□ -0.33
CTSA-215ENST00000607187 HLFQ16534 295 aa12.98□□□□□ -0.33
CTSA-215ENST00000607187 PRR5LQ6MZQ0 368 aa12.98□□□□□ -0.33
CTSA-215ENST00000607187 TTLL7Q6ZT98 887 aa12.98□□□□□ -0.33
CTSA-215ENST00000607187 PIM2Q9P1W9 311 aa12.98□□□□□ -0.33
CTSA-215ENST00000607187 BCS1LQ9Y276 419 aa12.98□□□□□ -0.33
CTSA-215ENST00000607187 PROSER3Q2NL68 480 aa12.97□□□□□ -0.33
CTSA-215ENST00000607187 KIF6Q6ZMV9 814 aa12.97□□□□□ -0.33
CTSA-215ENST00000607187 BRIP1Q9BX63 1249 aa12.97□□□□□ -0.33
CTSA-215ENST00000607187 NIP7Q9Y221 180 aaKnown RBP eCLIP12.97□□□□□ -0.33
CTSA-215ENST00000607187 COL11A2P13942 1736 aaPredicted RBP12.96□□□□□ -0.33
CTSA-215ENST00000607187 ANXA1P04083 346 aa12.96□□□□□ -0.33
CTSA-215ENST00000607187 DALRD3Q5D0E6 543 aaKnown RBP12.96□□□□□ -0.33
CTSA-215ENST00000607187 DUSP27Q5VZP5 1158 aa12.96□□□□□ -0.33
CTSA-215ENST00000607187 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.96□□□□□ -0.33
CTSA-215ENST00000607187 WWC1Q8IX03 1113 aa12.96□□□□□ -0.33
CTSA-215ENST00000607187 CNBD1Q8NA66 436 aa12.96□□□□□ -0.33
CTSA-215ENST00000607187 KCNV2Q8TDN2 545 aa12.96□□□□□ -0.33
CTSA-215ENST00000607187 NECTIN2Q92692 538 aa12.96□□□□□ -0.33
CTSA-215ENST00000607187 PDZRN3Q9UPQ7 1066 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms