RNA–Protein interactions for RNA: ENST00000606055.1

LINC00458-204, long intergenic non-protein coding RNA 458, humanhuman

TSL 3

Gene LINC00458, Length 425 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-204ENST00000606055 N4BP2Q86UW6 1770 aaPredicted RBP9.18□□□□□ -0.94
LINC00458-204ENST00000606055 KLHL34Q8N239 644 aa9.18□□□□□ -0.94
LINC00458-204ENST00000606055 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.18□□□□□ -0.94
LINC00458-204ENST00000606055 SSH1Q8WYL5 1049 aa9.18□□□□□ -0.94
LINC00458-204ENST00000606055 SGIP1Q9BQI5 828 aa9.18□□□□□ -0.94
LINC00458-204ENST00000606055 ZNF330Q9Y3S2 320 aaPredicted RBP9.18□□□□□ -0.94
LINC00458-204ENST00000606055 CACNA1SQ13698 1873 aa9.17□□□□□ -0.94
LINC00458-204ENST00000606055 ANKRD36CQ5JPF3 1778 aa9.17□□□□□ -0.94
LINC00458-204ENST00000606055 PXDNLA1KZ92 1463 aa9.17□□□□□ -0.94
LINC00458-204ENST00000606055 NBPF26B4DH59 902 aa9.17□□□□□ -0.94
LINC00458-204ENST00000606055 TRIM28Q13263 835 aaKnown RBP9.17□□□□□ -0.94
LINC00458-204ENST00000606055 NBPF10Q6P3W6 841 aaKnown RBP9.17□□□□□ -0.94
LINC00458-204ENST00000606055 NLGN1Q8N2Q7 840 aa9.17□□□□□ -0.94
LINC00458-204ENST00000606055 MRPL50Q8N5N7 158 aaKnown RBP9.17□□□□□ -0.94
LINC00458-204ENST00000606055 NBPF15Q8N660 670 aa9.17□□□□□ -0.94
LINC00458-204ENST00000606055 API5Q9BZZ5 524 aaKnown RBP9.17□□□□□ -0.94
LINC00458-204ENST00000606055 CHPF2Q9P2E5 772 aa9.17□□□□□ -0.94
LINC00458-204ENST00000606055 USP42Q9H9J4 1324 aaKnown RBP9.16□□□□□ -0.94
LINC00458-204ENST00000606055 PRAMEF22A3QJZ6 481 aa9.16□□□□□ -0.94
LINC00458-204ENST00000606055 DCAF8L1A6NGE4 600 aa9.16□□□□□ -0.94
LINC00458-204ENST00000606055 A1BGP04217 495 aa9.16□□□□□ -0.94
LINC00458-204ENST00000606055 EIF2S2P20042 333 aaKnown RBP9.16□□□□□ -0.94
LINC00458-204ENST00000606055 FLIIQ13045 1269 aa9.16□□□□□ -0.94
LINC00458-204ENST00000606055 AAMPQ13685 434 aa9.16□□□□□ -0.94
LINC00458-204ENST00000606055 PDE3AQ14432 1141 aa9.16□□□□□ -0.94
LINC00458-204ENST00000606055 HSP90AB3PQ58FF7 597 aa9.16□□□□□ -0.94
LINC00458-204ENST00000606055 PLBD2Q8NHP8 589 aa9.16□□□□□ -0.94
LINC00458-204ENST00000606055 SMC4Q9NTJ3 1288 aa9.16□□□□□ -0.94
LINC00458-204ENST00000606055 SRP68Q9UHB9 627 aaKnown RBP9.16□□□□□ -0.94
LINC00458-204ENST00000606055 BRCA1P38398 1863 aaKnown RBP9.16□□□□□ -0.94
LINC00458-204ENST00000606055 ATP10DQ9P241 1426 aa9.15□□□□□ -0.94
LINC00458-204ENST00000606055 MAP3K15Q6ZN16 1313 aa9.15□□□□□ -0.94
LINC00458-204ENST00000606055 NRXN2Q9P2S2 1712 aa9.15□□□□□ -0.94
LINC00458-204ENST00000606055 SENP3-EIF4A1A0A087X0R7 540 aa9.15□□□□□ -0.94
LINC00458-204ENST00000606055 ELL2O00472 640 aaPredicted RBP9.15□□□□□ -0.94
LINC00458-204ENST00000606055 MMP10P09238 476 aa9.15□□□□□ -0.94
LINC00458-204ENST00000606055 GYS1P13807 737 aa9.15□□□□□ -0.94
LINC00458-204ENST00000606055 USPL1Q5W0Q7 1092 aa9.15□□□□□ -0.94
LINC00458-204ENST00000606055 KSR2Q6VAB6 950 aa9.15□□□□□ -0.94
LINC00458-204ENST00000606055 ANKRD13DQ6ZTN6 518 aa9.15□□□□□ -0.94
LINC00458-204ENST00000606055 FHDC1Q9C0D6 1143 aaPredicted RBP9.15□□□□□ -0.94
LINC00458-204ENST00000606055 NARFQ9UHQ1 456 aa9.15□□□□□ -0.94
LINC00458-204ENST00000606055 ZNF652Q9Y2D9 606 aa9.15□□□□□ -0.94
LINC00458-204ENST00000606055 PARP3Q9Y6F1 533 aa9.15□□□□□ -0.94
LINC00458-204ENST00000606055 DLEC1Q9Y238 1755 aa9.14□□□□□ -0.95
LINC00458-204ENST00000606055 PIP4K2AP48426 406 aaPredicted RBP9.14□□□□□ -0.95
LINC00458-204ENST00000606055 ZKSCAN2Q63HK3 967 aa9.14□□□□□ -0.95
LINC00458-204ENST00000606055 ATF7IPQ6VMQ6 1270 aa9.14□□□□□ -0.95
LINC00458-204ENST00000606055 GIGYF2Q6Y7W6 1299 aaKnown RBP9.14□□□□□ -0.95
LINC00458-204ENST00000606055 SYT17Q9BSW7 474 aa9.14□□□□□ -0.95
LINC00458-204ENST00000606055 CHMP4BQ9H444 224 aaKnown RBP9.14□□□□□ -0.95
LINC00458-204ENST00000606055 ARFGEF1Q9Y6D6 1849 aa9.14□□□□□ -0.95
LINC00458-204ENST00000606055 KIAA1551Q9HCM1 1747 aa9.14□□□□□ -0.95
LINC00458-204ENST00000606055 ANKRD31Q8N7Z5 1873 aa9.13□□□□□ -0.95
LINC00458-204ENST00000606055 ABCC4O15439 1325 aa9.13□□□□□ -0.95
LINC00458-204ENST00000606055 FKBP8Q14318 412 aa9.13□□□□□ -0.95
LINC00458-204ENST00000606055 PROSER3Q2NL68 480 aa9.13□□□□□ -0.95
LINC00458-204ENST00000606055 INTS3Q68E01 1043 aaKnown RBP9.13□□□□□ -0.95
LINC00458-204ENST00000606055 KIF6Q6ZMV9 814 aa9.13□□□□□ -0.95
LINC00458-204ENST00000606055 COPS6Q7L5N1 327 aa9.13□□□□□ -0.95
LINC00458-204ENST00000606055 DZIP3Q86Y13 1208 aaKnown RBP9.13□□□□□ -0.95
LINC00458-204ENST00000606055 TBC1D2BQ9UPU7 963 aa9.13□□□□□ -0.95
LINC00458-204ENST00000606055 HDAC5Q9UQL6 1122 aa9.13□□□□□ -0.95
LINC00458-204ENST00000606055 CCDC88AQ3V6T2 1871 aa9.13□□□□□ -0.95
LINC00458-204ENST00000606055 ARFGEF2Q9Y6D5 1785 aa9.12□□□□□ -0.95
LINC00458-204ENST00000606055 BCAR3O75815 825 aa9.12□□□□□ -0.95
LINC00458-204ENST00000606055 ALDH1L1O75891 902 aa9.12□□□□□ -0.95
LINC00458-204ENST00000606055 CAMTA2O94983 1202 aa9.12□□□□□ -0.95
LINC00458-204ENST00000606055 HSP90B1P14625 803 aaKnown RBP9.12□□□□□ -0.95
LINC00458-204ENST00000606055 CCT4P50991 539 aaKnown RBP9.12□□□□□ -0.95
LINC00458-204ENST00000606055 FKBP5Q13451 457 aaPredicted RBP9.12□□□□□ -0.95
LINC00458-204ENST00000606055 PARP10Q53GL7 1025 aa9.12□□□□□ -0.95
LINC00458-204ENST00000606055 CCDC191Q8NCU4 936 aa9.12□□□□□ -0.95
LINC00458-204ENST00000606055 LINS1Q8NG48 757 aa9.12□□□□□ -0.95
LINC00458-204ENST00000606055 XAGE3Q8WTP9 111 aa9.12□□□□□ -0.95
LINC00458-204ENST00000606055 DNAAF4Q8WXU2 420 aa9.12□□□□□ -0.95
LINC00458-204ENST00000606055 METTL22Q9BUU2 404 aaPredicted RBP9.12□□□□□ -0.95
LINC00458-204ENST00000606055 CD2APQ9Y5K6 639 aa9.12□□□□□ -0.95
LINC00458-204ENST00000606055 ADCY9O60503 1353 aa9.12□□□□□ -0.95
LINC00458-204ENST00000606055 PI4KAP2A4QPH2 592 aa9.11□□□□□ -0.95
LINC00458-204ENST00000606055 TRIM27P14373 513 aa9.11□□□□□ -0.95
LINC00458-204ENST00000606055 MYL6BP14649 208 aa9.11□□□□□ -0.95
LINC00458-204ENST00000606055 RRP1P56182 461 aaKnown RBP9.11□□□□□ -0.95
LINC00458-204ENST00000606055 NEXNQ0ZGT2 675 aa9.11□□□□□ -0.95
LINC00458-204ENST00000606055 TCIRG1Q13488 830 aa9.11□□□□□ -0.95
LINC00458-204ENST00000606055 DZIP1LQ8IYY4 767 aaKnown RBP9.11□□□□□ -0.95
LINC00458-204ENST00000606055 PI4KAP1Q8N8J0 262 aa9.11□□□□□ -0.95
LINC00458-204ENST00000606055 NECTIN2Q92692 538 aa9.11□□□□□ -0.95
LINC00458-204ENST00000606055 PHAXQ9H814 394 aaKnown RBP9.11□□□□□ -0.95
LINC00458-204ENST00000606055 NOB1Q9ULX3 412 aaKnown RBP9.11□□□□□ -0.95
LINC00458-204ENST00000606055 NPHP1O15259 732 aa9.1□□□□□ -0.95
LINC00458-204ENST00000606055 TM4SF1P30408 202 aa9.1□□□□□ -0.95
LINC00458-204ENST00000606055 NFIXQ14938 502 aa9.1□□□□□ -0.95
LINC00458-204ENST00000606055 ERICH6BQ5W0A0 696 aa9.1□□□□□ -0.95
LINC00458-204ENST00000606055 BICDL1Q6ZP65 573 aa9.1□□□□□ -0.95
LINC00458-204ENST00000606055 G2E3Q7L622 706 aa9.1□□□□□ -0.95
LINC00458-204ENST00000606055 RIC3Q7Z5B4 369 aa9.1□□□□□ -0.95
LINC00458-204ENST00000606055 ZNF34Q8IZ26 560 aa9.1□□□□□ -0.95
LINC00458-204ENST00000606055 ISCA1Q9BUE6 129 aa9.1□□□□□ -0.95
LINC00458-204ENST00000606055 RIC1Q4ADV7 1423 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms