RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 ST5P78524 1137 aa23.76■■□□□ 1.39
CCDC12-208ENST00000603885 TTLL6Q8N841 843 aa23.76■■□□□ 1.39
CCDC12-208ENST00000603885 CCDC24Q8N4L8 307 aa23.75■■□□□ 1.39
CCDC12-208ENST00000603885 NBPF5PQ86XG9 351 aaPredicted RBP23.74■■□□□ 1.39
CCDC12-208ENST00000603885 NGEFQ8N5V2 710 aa23.74■■□□□ 1.39
CCDC12-208ENST00000603885 C9orf131Q5VYM1 1079 aa23.73■■□□□ 1.39
CCDC12-208ENST00000603885 NIP7Q9Y221 180 aaKnown RBP eCLIP23.73■■□□□ 1.39
CCDC12-208ENST00000603885 ERBB4Q15303 1308 aa23.73■■□□□ 1.39
CCDC12-208ENST00000603885 MYL6BP14649 208 aa23.72■■□□□ 1.39
CCDC12-208ENST00000603885 ZNF622Q969S3 477 aaKnown RBP eCLIP23.72■■□□□ 1.393e-8■■□□□ 12.2
CCDC12-208ENST00000603885 COL11A2P13942 1736 aaPredicted RBP23.71■■□□□ 1.39
CCDC12-208ENST00000603885 HLFQ16534 295 aa23.71■■□□□ 1.39
CCDC12-208ENST00000603885 KIF6Q6ZMV9 814 aa23.71■■□□□ 1.39
CCDC12-208ENST00000603885 TRIM35Q9UPQ4 493 aa23.71■■□□□ 1.39
CCDC12-208ENST00000603885 MAP3K15Q6ZN16 1313 aa23.7■■□□□ 1.38
CCDC12-208ENST00000603885 ERVV-1B6SEH8 477 aa23.7■■□□□ 1.38
CCDC12-208ENST00000603885 TPTE2Q6XPS3 522 aa23.7■■□□□ 1.38
CCDC12-208ENST00000603885 RNF181Q9P0P0 153 aa23.69■■□□□ 1.38
CCDC12-208ENST00000603885 EIF2S2P20042 333 aaKnown RBP23.68■■□□□ 1.38
CCDC12-208ENST00000603885 TTLL7Q6ZT98 887 aa23.68■■□□□ 1.38
CCDC12-208ENST00000603885 CHL1O00533 1208 aa23.67■■□□□ 1.38
CCDC12-208ENST00000603885 RASSF7Q02833 373 aa23.67■■□□□ 1.38
CCDC12-208ENST00000603885 STYK1Q6J9G0 422 aa23.67■■□□□ 1.38
CCDC12-208ENST00000603885 CNKSR1Q969H4 720 aa23.67■■□□□ 1.38
CCDC12-208ENST00000603885 LAS1LQ9Y4W2 734 aaKnown RBP23.67■■□□□ 1.38
CCDC12-208ENST00000603885 SBF1O95248 1867 aa23.66■■□□□ 1.38
CCDC12-208ENST00000603885 FAM177BA6PVY3 158 aa23.66■■□□□ 1.38
CCDC12-208ENST00000603885 SRGNP10124 158 aa23.66■■□□□ 1.38
CCDC12-208ENST00000603885 MASTLQ96GX5 879 aa23.66■■□□□ 1.38
CCDC12-208ENST00000603885 ZBTB3Q9H5J0 574 aa23.66■■□□□ 1.38
CCDC12-208ENST00000603885 NUP98P52948 1817 aa23.66■■□□□ 1.38
CCDC12-208ENST00000603885 SENP3-EIF4A1A0A087X0R7 540 aa23.65■■□□□ 1.38
CCDC12-208ENST00000603885 ZNF316A6NFI3 1004 aaPredicted RBP23.65■■□□□ 1.38
CCDC12-208ENST00000603885 GTF2E1P29083 439 aaPredicted RBP23.64■■□□□ 1.37
CCDC12-208ENST00000603885 NYXQ9GZU5 481 aa23.64■■□□□ 1.37
CCDC12-208ENST00000603885 APAF1O14727 1248 aa23.63■■□□□ 1.37
CCDC12-208ENST00000603885 KIF3CO14782 793 aa23.63■■□□□ 1.37
CCDC12-208ENST00000603885 C21orf2O43822 256 aa23.63■■□□□ 1.37
CCDC12-208ENST00000603885 LMNB1P20700 586 aa23.63■■□□□ 1.37
CCDC12-208ENST00000603885 PDIA6Q15084 440 aa23.63■■□□□ 1.37
CCDC12-208ENST00000603885 ZNF219Q9P2Y4 722 aaPredicted RBP23.63■■□□□ 1.37
CCDC12-208ENST00000603885 PRPF40BQ6NWY9 871 aaKnown RBP23.62■■□□□ 1.37
CCDC12-208ENST00000603885 LRP10Q7Z4F1 713 aa23.62■■□□□ 1.37
CCDC12-208ENST00000603885 CFAP44Q96MT7 982 aa23.62■■□□□ 1.37
CCDC12-208ENST00000603885 ZC3H4Q9UPT8 1303 aaKnown RBP23.61■■□□□ 1.37
CCDC12-208ENST00000603885 ARFGEF2Q9Y6D5 1785 aa23.61■■□□□ 1.37
CCDC12-208ENST00000603885 KLRG2A4D1S0 409 aaPredicted RBP23.61■■□□□ 1.37
CCDC12-208ENST00000603885 NFKBIEO00221 500 aa23.61■■□□□ 1.37
CCDC12-208ENST00000603885 NPR1P16066 1061 aa23.61■■□□□ 1.37
CCDC12-208ENST00000603885 KRT24Q2M2I5 525 aa23.61■■□□□ 1.37
CCDC12-208ENST00000603885 PROSER3Q2NL68 480 aa23.61■■□□□ 1.37
CCDC12-208ENST00000603885 GIGYF2Q6Y7W6 1299 aaKnown RBP23.61■■□□□ 1.37
CCDC12-208ENST00000603885 NECTIN2Q92692 538 aa23.61■■□□□ 1.37
CCDC12-208ENST00000603885 CACNA1SQ13698 1873 aa23.6■■□□□ 1.37
CCDC12-208ENST00000603885 ANXA1P04083 346 aa23.6■■□□□ 1.37
CCDC12-208ENST00000603885 GPTP24298 496 aa23.6■■□□□ 1.37
CCDC12-208ENST00000603885 SLX4Q8IY92 1834 aa23.6■■□□□ 1.37
CCDC12-208ENST00000603885 IBTKQ9P2D0 1353 aaPredicted RBP23.6■■□□□ 1.37
CCDC12-208ENST00000603885 UBN2Q6ZU65 1347 aa23.59■■□□□ 1.37
CCDC12-208ENST00000603885 KDM2BQ8NHM5 1336 aa23.59■■□□□ 1.37
CCDC12-208ENST00000603885 CALD1Q05682 793 aaKnown RBP23.59■■□□□ 1.37
CCDC12-208ENST00000603885 SOGA3Q5TF21 947 aa23.59■■□□□ 1.37
CCDC12-208ENST00000603885 NMRK2Q9NPI5 230 aa23.59■■□□□ 1.37
CCDC12-208ENST00000603885 HOXB7P09629 217 aa23.58■■□□□ 1.37
CCDC12-208ENST00000603885 PRELPP51888 382 aa23.58■■□□□ 1.37
CCDC12-208ENST00000603885 NUTM1Q86Y26 1132 aa23.58■■□□□ 1.37
CCDC12-208ENST00000603885 ZNF34Q8IZ26 560 aa23.58■■□□□ 1.37
CCDC12-208ENST00000603885 FER1L6Q2WGJ9 1857 aa23.58■■□□□ 1.36
CCDC12-208ENST00000603885 ABCC12Q96J65 1359 aa23.57■■□□□ 1.36
CCDC12-208ENST00000603885 CCDC184Q52MB2 194 aa23.57■■□□□ 1.36
CCDC12-208ENST00000603885 HDGFL1Q5TGJ6 251 aa23.57■■□□□ 1.36
CCDC12-208ENST00000603885 DDX21Q9NR30 783 aaKnown RBP eCLIP23.57■■□□□ 1.36
CCDC12-208ENST00000603885 ANP32CO43423 234 aa23.56■■□□□ 1.36
CCDC12-208ENST00000603885 ERFEQ4G0M1 354 aa23.56■■□□□ 1.36
CCDC12-208ENST00000603885 PARP10Q53GL7 1025 aa23.56■■□□□ 1.36
CCDC12-208ENST00000603885 SUSD4Q5VX71 490 aa23.56■■□□□ 1.36
CCDC12-208ENST00000603885 COPS6Q7L5N1 327 aa23.56■■□□□ 1.36
CCDC12-208ENST00000603885 XAGE3Q8WTP9 111 aa23.56■■□□□ 1.36
CCDC12-208ENST00000603885 TAOK3Q9H2K8 898 aa23.56■■□□□ 1.36
CCDC12-208ENST00000603885 MBIPQ9NS73 344 aa23.56■■□□□ 1.36
CCDC12-208ENST00000603885 IFT57Q9NWB7 429 aa23.56■■□□□ 1.36
CCDC12-208ENST00000603885 TNRC6CQ9HCJ0 1690 aaKnown RBP23.56■■□□□ 1.36
CCDC12-208ENST00000603885 LTBP3Q9NS15 1303 aa23.56■■□□□ 1.36
CCDC12-208ENST00000603885 CCDC88AQ3V6T2 1871 aa23.56■■□□□ 1.36
CCDC12-208ENST00000603885 ZNF853P0CG23 659 aa23.55■■□□□ 1.36
CCDC12-208ENST00000603885 GNAI1P63096 354 aa23.55■■□□□ 1.36
CCDC12-208ENST00000603885 AIMP1Q12904 312 aaKnown RBP23.55■■□□□ 1.36
CCDC12-208ENST00000603885 PPP1R42Q7Z4L9 355 aa23.55■■□□□ 1.36
CCDC12-208ENST00000603885 RIC1Q4ADV7 1423 aa23.55■■□□□ 1.36
CCDC12-208ENST00000603885 TIAM2Q8IVF5 1701 aa23.55■■□□□ 1.36
CCDC12-208ENST00000603885 TOMM70O94826 608 aa23.54■■□□□ 1.36
CCDC12-208ENST00000603885 ALDH1B1P30837 517 aa23.54■■□□□ 1.36
CCDC12-208ENST00000603885 HSP90AB3PQ58FF7 597 aa23.54■■□□□ 1.36
CCDC12-208ENST00000603885 CHPF2Q9P2E5 772 aa23.54■■□□□ 1.36
CCDC12-208ENST00000603885 NTSR2O95665 410 aa23.53■■□□□ 1.36
CCDC12-208ENST00000603885 CRY2Q49AN0 593 aa23.53■■□□□ 1.36
CCDC12-208ENST00000603885 CCDC93Q567U6 631 aa23.53■■□□□ 1.36
CCDC12-208ENST00000603885 DUSP27Q5VZP5 1158 aa23.53■■□□□ 1.36
CCDC12-208ENST00000603885 C7orf43Q8WVR3 580 aa23.53■■□□□ 1.36
CCDC12-208ENST00000603885 C16orf71Q8IYS4 520 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms