RNA–Protein interactions for RNA: ENST00000602503.1

KDM1A-206, Transcript of lysine demethylase 1A, humanhuman

Gene KDM1A, Length 2,810 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-206ENST00000602503 MORC1Q86VD1 984 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 ITPRIPQ8IWB1 547 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 UBXN6Q9BZV1 441 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 ESF1Q9H501 851 aaKnown RBP9.18□□□□□ -0.94
KDM1A-206ENST00000602503 STK26Q9P289 416 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 STAG3Q9UJ98 1225 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 CAVIN2O95810 425 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 LIG1P18858 919 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 PTGS1P23219 599 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 CDC25BP30305 580 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 PLA2G4AP47712 749 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 CUL4AQ13619 759 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 FAM200AQ8TCP9 573 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 RTF1Q92541 710 aaKnown RBP9.18□□□□□ -0.94
KDM1A-206ENST00000602503 FUCA2Q9BTY2 467 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 ZRANB2O95218 330 aaKnown RBP eCLIP9.17□□□□□ -0.94
KDM1A-206ENST00000602503 ZSCAN25Q6NSZ9 544 aa9.17□□□□□ -0.94
KDM1A-206ENST00000602503 NYAP1Q6ZVC0 841 aa9.17□□□□□ -0.94
KDM1A-206ENST00000602503 USP48Q86UV5 1035 aa9.17□□□□□ -0.94
KDM1A-206ENST00000602503 ZGPATQ8N5A5 531 aaKnown RBP9.17□□□□□ -0.94
KDM1A-206ENST00000602503 NFATC2IPQ8NCF5 419 aa9.17□□□□□ -0.94
KDM1A-206ENST00000602503 SRRTQ9BXP5 876 aaKnown RBP9.17□□□□□ -0.94
KDM1A-206ENST00000602503 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.17□□□□□ -0.94
KDM1A-206ENST00000602503 ABCC11Q96J66 1382 aa9.17□□□□□ -0.94
KDM1A-206ENST00000602503 PREX1Q8TCU6 1659 aa9.17□□□□□ -0.94
KDM1A-206ENST00000602503 U2SURPO15042 1029 aaKnown RBP9.17□□□□□ -0.94
KDM1A-206ENST00000602503 GYS2P54840 703 aa9.17□□□□□ -0.94
KDM1A-206ENST00000602503 NBPF9Q3BBW0 867 aa9.17□□□□□ -0.94
KDM1A-206ENST00000602503 CCDC186Q7Z3E2 898 aa9.17□□□□□ -0.94
KDM1A-206ENST00000602503 DRC7Q8IY82 874 aa9.17□□□□□ -0.94
KDM1A-206ENST00000602503 EFCAB13Q8IY85 973 aa9.17□□□□□ -0.94
KDM1A-206ENST00000602503 SPC24Q8NBT2 197 aa9.17□□□□□ -0.94
KDM1A-206ENST00000602503 GTF3C6Q969F1 213 aa9.17□□□□□ -0.94
KDM1A-206ENST00000602503 CCDC9Q9Y3X0 531 aaKnown RBP9.17□□□□□ -0.94
KDM1A-206ENST00000602503 CDC42BPGQ6DT37 1551 aa9.16□□□□□ -0.94
KDM1A-206ENST00000602503 NAA30Q147X3 362 aaPredicted RBP9.16□□□□□ -0.94
KDM1A-206ENST00000602503 L2HGDHQ9H9P8 463 aa9.16□□□□□ -0.94
KDM1A-206ENST00000602503 TMEM131LA2VDJ0 1609 aa9.16□□□□□ -0.94
KDM1A-206ENST00000602503 ZKSCAN8Q15776 578 aaPredicted RBP9.16□□□□□ -0.94
KDM1A-206ENST00000602503 NBPF11Q86T75 865 aa9.16□□□□□ -0.94
KDM1A-206ENST00000602503 TBC1D22AQ8WUA7 517 aa9.16□□□□□ -0.94
KDM1A-206ENST00000602503 ST7Q9NRC1 585 aa9.16□□□□□ -0.94
KDM1A-206ENST00000602503 IL16Q14005 1332 aa9.15□□□□□ -0.94
KDM1A-206ENST00000602503 DLC1Q96QB1 1528 aa9.15□□□□□ -0.94
KDM1A-206ENST00000602503 ERCC3P19447 782 aa9.15□□□□□ -0.94
KDM1A-206ENST00000602503 CLCN6P51797 869 aa9.15□□□□□ -0.94
KDM1A-206ENST00000602503 ANKRD45Q5TZF3 282 aa9.15□□□□□ -0.94
KDM1A-206ENST00000602503 PACS2Q86VP3 889 aa9.15□□□□□ -0.94
KDM1A-206ENST00000602503 ZNF592Q92610 1267 aa9.15□□□□□ -0.94
KDM1A-206ENST00000602503 SMARCE1Q969G3 411 aa9.15□□□□□ -0.94
KDM1A-206ENST00000602503 CORO7P57737 925 aa9.15□□□□□ -0.94
KDM1A-206ENST00000602503 STAG1Q8WVM7 1258 aa9.15□□□□□ -0.94
KDM1A-206ENST00000602503 LCMT1Q9UIC8 334 aa9.15□□□□□ -0.94
KDM1A-206ENST00000602503 CCDC189A1A4V9 331 aa9.14□□□□□ -0.95
KDM1A-206ENST00000602503 TRIM27P14373 513 aa9.14□□□□□ -0.95
KDM1A-206ENST00000602503 SETQ01105 290 aaPredicted RBP9.14□□□□□ -0.95
KDM1A-206ENST00000602503 NBPF10Q6P3W6 841 aaKnown RBP9.14□□□□□ -0.95
KDM1A-206ENST00000602503 EP400NLQ6ZTU2 488 aa9.14□□□□□ -0.95
KDM1A-206ENST00000602503 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.14□□□□□ -0.95
KDM1A-206ENST00000602503 JMYQ8N9B5 988 aa9.14□□□□□ -0.95
KDM1A-206ENST00000602503 TRAK1Q9UPV9 953 aa9.14□□□□□ -0.95
KDM1A-206ENST00000602503 TNNQ9UQP3 1299 aa9.14□□□□□ -0.95
KDM1A-206ENST00000602503 KIF20BQ96Q89 1820 aa9.14□□□□□ -0.95
KDM1A-206ENST00000602503 POLR3GO15318 223 aaPredicted RBP9.14□□□□□ -0.95
KDM1A-206ENST00000602503 HMGB1P09429 215 aaKnown RBP9.14□□□□□ -0.95
KDM1A-206ENST00000602503 DNAAF4Q8WXU2 420 aa9.14□□□□□ -0.95
KDM1A-206ENST00000602503 UTP14AQ9BVJ6 771 aaKnown RBP9.14□□□□□ -0.95
KDM1A-206ENST00000602503 TTC36A6NLP5 189 aa9.13□□□□□ -0.95
KDM1A-206ENST00000602503 EIF3CLB5ME19 914 aaKnown RBP9.13□□□□□ -0.95
KDM1A-206ENST00000602503 SGSM2O43147 1006 aa9.13□□□□□ -0.95
KDM1A-206ENST00000602503 PLA2G4DQ86XP0 818 aa9.13□□□□□ -0.95
KDM1A-206ENST00000602503 ERC1Q8IUD2 1116 aa9.13□□□□□ -0.95
KDM1A-206ENST00000602503 TMX3Q96JJ7 454 aa9.13□□□□□ -0.95
KDM1A-206ENST00000602503 EIF3CQ99613 913 aaKnown RBP9.13□□□□□ -0.95
KDM1A-206ENST00000602503 COL3A1P02461 1466 aaPredicted RBP9.13□□□□□ -0.95
KDM1A-206ENST00000602503 A0A087WUV0 522 aaPredicted RBP9.13□□□□□ -0.95
KDM1A-206ENST00000602503 CCP110O43303 1012 aa9.13□□□□□ -0.95
KDM1A-206ENST00000602503 MKRN4PQ13434 485 aaPredicted RBP9.13□□□□□ -0.95
KDM1A-206ENST00000602503 JAKMIP3Q5VZ66 844 aa9.13□□□□□ -0.95
KDM1A-206ENST00000602503 MSL3Q8N5Y2 521 aaKnown RBP9.13□□□□□ -0.95
KDM1A-206ENST00000602503 UBXN4Q92575 508 aa9.13□□□□□ -0.95
KDM1A-206ENST00000602503 ZNF428Q96B54 188 aa9.13□□□□□ -0.95
KDM1A-206ENST00000602503 AGLP35573 1532 aa9.13□□□□□ -0.95
KDM1A-206ENST00000602503 GADD45BO75293 160 aaPredicted RBP9.13□□□□□ -0.95
KDM1A-206ENST00000602503 OAS2P29728 719 aaKnown RBP9.13□□□□□ -0.95
KDM1A-206ENST00000602503 ZNF75DP51815 510 aa9.13□□□□□ -0.95
KDM1A-206ENST00000602503 ANAPC15P60006 121 aa9.13□□□□□ -0.95
KDM1A-206ENST00000602503 SMC1AQ14683 1233 aaKnown RBP9.13□□□□□ -0.95
KDM1A-206ENST00000602503 RNF217Q8TC41 542 aa9.13□□□□□ -0.95
KDM1A-206ENST00000602503 A1CFQ9NQ94 594 aaKnown RBP9.13□□□□□ -0.95
KDM1A-206ENST00000602503 NRDCO43847 1150 aa9.12□□□□□ -0.95
KDM1A-206ENST00000602503 EIF5P55010 431 aaKnown RBP9.12□□□□□ -0.95
KDM1A-206ENST00000602503 C11orf91Q3C1V1 193 aa9.12□□□□□ -0.95
KDM1A-206ENST00000602503 TSGA10IPQ3SY00 556 aa9.12□□□□□ -0.95
KDM1A-206ENST00000602503 CCDC158Q5M9N0 1113 aa9.12□□□□□ -0.95
KDM1A-206ENST00000602503 RBM33Q96EV2 1170 aaKnown RBP9.12□□□□□ -0.95
KDM1A-206ENST00000602503 BCL2L13Q9BXK5 485 aa9.12□□□□□ -0.95
KDM1A-206ENST00000602503 TERF2IPQ9NYB0 399 aa9.12□□□□□ -0.95
KDM1A-206ENST00000602503 PTPRMP28827 1452 aa9.12□□□□□ -0.95
KDM1A-206ENST00000602503 C21orf2O43822 256 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms