RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 SETD1BQ9UPS6 1966 aaKnown RBP11.67□□□□□ -0.54
LINC00343-209ENST00000601607 RANGAP1P46060 587 aaPredicted RBP11.66□□□□□ -0.54
LINC00343-209ENST00000601607 TLR1Q15399 786 aa11.66□□□□□ -0.54
LINC00343-209ENST00000601607 AFAP1Q8N556 730 aa11.66□□□□□ -0.54
LINC00343-209ENST00000601607 ZSCAN10Q96SZ4 725 aaPredicted RBP11.66□□□□□ -0.54
LINC00343-209ENST00000601607 FHDC1Q9C0D6 1143 aaPredicted RBP11.66□□□□□ -0.54
LINC00343-209ENST00000601607 MKRN1Q9UHC7 482 aaKnown RBP11.66□□□□□ -0.54
LINC00343-209ENST00000601607 SERTAD1Q9UHV2 236 aa11.66□□□□□ -0.54
LINC00343-209ENST00000601607 CAMSAP1Q5T5Y3 1602 aa11.65□□□□□ -0.54
LINC00343-209ENST00000601607 SENP3-EIF4A1A0A087X0R7 540 aa11.65□□□□□ -0.54
LINC00343-209ENST00000601607 SLC35F4A4IF30 521 aa11.65□□□□□ -0.54
LINC00343-209ENST00000601607 TMEM229AB2RXF0 380 aa11.65□□□□□ -0.54
LINC00343-209ENST00000601607 EFCAB2Q5VUJ9 269 aa11.64□□□□□ -0.55
LINC00343-209ENST00000601607 NBPF10Q6P3W6 841 aaKnown RBP11.64□□□□□ -0.55
LINC00343-209ENST00000601607 NBPF15Q8N660 670 aa11.64□□□□□ -0.55
LINC00343-209ENST00000601607 C3P01024 1663 aa11.64□□□□□ -0.55
LINC00343-209ENST00000601607 ZNF518AQ6AHZ1 1483 aa11.63□□□□□ -0.55
LINC00343-209ENST00000601607 SPATA31C2B4DYI2 1134 aa11.63□□□□□ -0.55
LINC00343-209ENST00000601607 WASLO00401 505 aaPredicted RBP11.63□□□□□ -0.55
LINC00343-209ENST00000601607 GTF2E1P29083 439 aaPredicted RBP11.63□□□□□ -0.55
LINC00343-209ENST00000601607 LMOD1P29536 600 aaPredicted RBP11.63□□□□□ -0.55
LINC00343-209ENST00000601607 ATP1A2P50993 1020 aa11.63□□□□□ -0.55
LINC00343-209ENST00000601607 CLDN10P78369 228 aa11.63□□□□□ -0.55
LINC00343-209ENST00000601607 TMEM214Q6NUQ4 689 aaKnown RBP11.63□□□□□ -0.55
LINC00343-209ENST00000601607 OGFOD1Q8N543 542 aa11.63□□□□□ -0.55
LINC00343-209ENST00000601607 RNF225M0QZC1 329 aaPredicted RBP11.62□□□□□ -0.55
LINC00343-209ENST00000601607 KCNMA1Q12791 1236 aa11.62□□□□□ -0.55
LINC00343-209ENST00000601607 TAS1R3Q7RTX0 852 aa11.62□□□□□ -0.55
LINC00343-209ENST00000601607 CNTNAP3BQ96NU0 1288 aa11.62□□□□□ -0.55
LINC00343-209ENST00000601607 CNTNAP3Q9BZ76 1288 aa11.62□□□□□ -0.55
LINC00343-209ENST00000601607 DNAAF2Q9NVR5 837 aaKnown RBP11.62□□□□□ -0.55
LINC00343-209ENST00000601607 KIAA1024Q9UPX6 916 aa11.62□□□□□ -0.55
LINC00343-209ENST00000601607 DIP2CQ9Y2E4 1556 aa11.62□□□□□ -0.55
LINC00343-209ENST00000601607 ITGA6P23229 1130 aa11.61□□□□□ -0.55
LINC00343-209ENST00000601607 KRT76Q01546 638 aa11.61□□□□□ -0.55
LINC00343-209ENST00000601607 GNASQ5JWF2 1037 aa11.61□□□□□ -0.55
LINC00343-209ENST00000601607 GPR161Q8N6U8 529 aaKnown RBP11.61□□□□□ -0.55
LINC00343-209ENST00000601607 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.61□□□□□ -0.55
LINC00343-209ENST00000601607 TPCN2Q8NHX9 752 aa11.61□□□□□ -0.55
LINC00343-209ENST00000601607 ZNF594Q96JF6 807 aaPredicted RBP11.61□□□□□ -0.55
LINC00343-209ENST00000601607 CDK13Q14004 1512 aaKnown RBP11.6□□□□□ -0.55
LINC00343-209ENST00000601607 KDM5CP41229 1560 aa11.6□□□□□ -0.55
LINC00343-209ENST00000601607 ZBTB7BO15156 539 aaPredicted RBP11.6□□□□□ -0.55
LINC00343-209ENST00000601607 SMTNP53814 917 aa11.6□□□□□ -0.55
LINC00343-209ENST00000601607 CCDC102BQ68D86 513 aa11.6□□□□□ -0.55
LINC00343-209ENST00000601607 COL25A1Q9BXS0 654 aaPredicted RBP11.6□□□□□ -0.55
LINC00343-209ENST00000601607 ZNF358Q9NW07 568 aa11.6□□□□□ -0.55
LINC00343-209ENST00000601607 CNTLNQ9NXG0 1405 aa11.6□□□□□ -0.55
LINC00343-209ENST00000601607 TOM1O60784 492 aa11.59□□□□□ -0.55
LINC00343-209ENST00000601607 RASA1P20936 1047 aa11.59□□□□□ -0.55
LINC00343-209ENST00000601607 PHKA2P46019 1235 aa11.59□□□□□ -0.55
LINC00343-209ENST00000601607 WDR44Q5JSH3 913 aa11.59□□□□□ -0.55
LINC00343-209ENST00000601607 CFAP70Q5T0N1 1121 aa11.59□□□□□ -0.55
LINC00343-209ENST00000601607 PPARGC1BQ86YN6 1023 aaKnown RBP11.59□□□□□ -0.55
LINC00343-209ENST00000601607 SLC4A9Q96Q91 983 aa11.59□□□□□ -0.55
LINC00343-209ENST00000601607 TIMMDC1Q9NPL8 285 aa11.59□□□□□ -0.55
LINC00343-209ENST00000601607 NPATQ14207 1427 aa11.59□□□□□ -0.55
LINC00343-209ENST00000601607 REREQ9P2R6 1566 aa11.58□□□□□ -0.55
LINC00343-209ENST00000601607 BACH1O14867 736 aa11.58□□□□□ -0.56
LINC00343-209ENST00000601607 C4orf17Q53FE4 359 aa11.58□□□□□ -0.56
LINC00343-209ENST00000601607 KANK4Q5T7N3 995 aaPredicted RBP11.58□□□□□ -0.56
LINC00343-209ENST00000601607 SV2AQ7L0J3 742 aa11.58□□□□□ -0.56
LINC00343-209ENST00000601607 LARGE2Q8N3Y3 721 aa11.58□□□□□ -0.56
LINC00343-209ENST00000601607 DYRK1BQ9Y463 629 aa11.58□□□□□ -0.56
LINC00343-209ENST00000601607 AGLP35573 1532 aa11.58□□□□□ -0.56
LINC00343-209ENST00000601607 PLA2R1Q13018 1463 aa11.57□□□□□ -0.56
LINC00343-209ENST00000601607 TCOF1Q13428 1488 aaKnown RBP11.57□□□□□ -0.56
LINC00343-209ENST00000601607 RHBDD1Q8TEB9 315 aa11.57□□□□□ -0.56
LINC00343-209ENST00000601607 GAS2L1Q99501 681 aaPredicted RBP11.57□□□□□ -0.56
LINC00343-209ENST00000601607 ABCA6Q8N139 1617 aa11.57□□□□□ -0.56
LINC00343-209ENST00000601607 A6NJY4 79 aa11.56□□□□□ -0.56
LINC00343-209ENST00000601607 RFX1P22670 979 aa11.56□□□□□ -0.56
LINC00343-209ENST00000601607 LARP1Q6PKG0 1096 aaKnown RBP11.56□□□□□ -0.56
LINC00343-209ENST00000601607 RIPOR1Q6ZS17 1223 aa11.56□□□□□ -0.56
LINC00343-209ENST00000601607 VRTNQ9H8Y1 702 aa11.56□□□□□ -0.56
LINC00343-209ENST00000601607 MLH3Q9UHC1 1453 aa11.56□□□□□ -0.56
LINC00343-209ENST00000601607 ZMYM3Q14202 1370 aa11.55□□□□□ -0.56
LINC00343-209ENST00000601607 CDC14CA4D256 554 aa11.55□□□□□ -0.56
LINC00343-209ENST00000601607 SIX5Q8N196 739 aa11.55□□□□□ -0.56
LINC00343-209ENST00000601607 VWA5B2Q8N398 1253 aa11.55□□□□□ -0.56
LINC00343-209ENST00000601607 RBM19Q9Y4C8 960 aaKnown RBP11.55□□□□□ -0.56
LINC00343-209ENST00000601607 ARHGAP5Q13017 1502 aa11.55□□□□□ -0.56
LINC00343-209ENST00000601607 MTFR1Q15390 333 aa11.54□□□□□ -0.56
LINC00343-209ENST00000601607 CRTC2Q53ET0 693 aaPredicted RBP11.54□□□□□ -0.56
LINC00343-209ENST00000601607 CCDC97Q96F63 343 aaPredicted RBP11.54□□□□□ -0.56
LINC00343-209ENST00000601607 CUEDC1Q9NWM3 386 aaPredicted RBP11.54□□□□□ -0.56
LINC00343-209ENST00000601607 RGS17Q9UGC6 210 aaPredicted RBP11.54□□□□□ -0.56
LINC00343-209ENST00000601607 USP3Q9Y6I4 520 aa11.54□□□□□ -0.56
LINC00343-209ENST00000601607 SFI1A8K8P3 1242 aa11.53□□□□□ -0.56
LINC00343-209ENST00000601607 CDK2AP1O14519 115 aa11.53□□□□□ -0.56
LINC00343-209ENST00000601607 SLURP2P0DP57 97 aa11.53□□□□□ -0.56
LINC00343-209ENST00000601607 PLA2G4AP47712 749 aa11.53□□□□□ -0.56
LINC00343-209ENST00000601607 CDCA8Q53HL2 280 aa11.53□□□□□ -0.56
LINC00343-209ENST00000601607 TNS4Q8IZW8 715 aa11.53□□□□□ -0.56
LINC00343-209ENST00000601607 SVOPQ8N4V2 548 aa11.53□□□□□ -0.56
LINC00343-209ENST00000601607 NIFKQ9BYG3 293 aaKnown RBP11.53□□□□□ -0.56
LINC00343-209ENST00000601607 SCHIP1Q9P0W5 487 aaPredicted RBP11.53□□□□□ -0.56
LINC00343-209ENST00000601607 ADAMTS8Q9UP79 889 aa11.53□□□□□ -0.56
LINC00343-209ENST00000601607 IQSEC3Q9UPP2 1182 aaPredicted RBP11.53□□□□□ -0.56
LINC00343-209ENST00000601607 RNFT1Q5M7Z0 435 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms