RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 SETDB2Q96T68 719 aa16.59■□□□□ 0.25
USE1-209ENST00000601592 CARMIL3Q8ND23 1372 aa16.59■□□□□ 0.25
USE1-209ENST00000601592 HOXB7P09629 217 aa16.58■□□□□ 0.24
USE1-209ENST00000601592 NCBP3Q53F19 620 aaKnown RBP16.58■□□□□ 0.24
USE1-209ENST00000601592 ZBTB3Q9H5J0 574 aa16.58■□□□□ 0.24
USE1-209ENST00000601592 CHPF2Q9P2E5 772 aa16.58■□□□□ 0.24
USE1-209ENST00000601592 ANKRD36CQ5JPF3 1778 aa16.58■□□□□ 0.24
USE1-209ENST00000601592 CHD4Q14839 1912 aa16.57■□□□□ 0.24
USE1-209ENST00000601592 BRCA1P38398 1863 aaKnown RBP16.57■□□□□ 0.24
USE1-209ENST00000601592 ANKRD31Q8N7Z5 1873 aa16.57■□□□□ 0.24
USE1-209ENST00000601592 PXDNLA1KZ92 1463 aa16.57■□□□□ 0.24
USE1-209ENST00000601592 IL16Q14005 1332 aa16.57■□□□□ 0.24
USE1-209ENST00000601592 MAP3K15Q6ZN16 1313 aa16.57■□□□□ 0.24
USE1-209ENST00000601592 AIMP1Q12904 312 aaKnown RBP16.57■□□□□ 0.24
USE1-209ENST00000601592 C8orf58Q8NAV2 365 aa16.57■□□□□ 0.24
USE1-209ENST00000601592 FAM177BA6PVY3 158 aa16.56■□□□□ 0.24
USE1-209ENST00000601592 PDIA6Q15084 440 aa16.56■□□□□ 0.24
USE1-209ENST00000601592 HLFQ16534 295 aa16.56■□□□□ 0.24
USE1-209ENST00000601592 CLEC4GQ6UXB4 293 aa16.56■□□□□ 0.24
USE1-209ENST00000601592 WDR63Q8IWG1 891 aa16.56■□□□□ 0.24
USE1-209ENST00000601592 DDX21Q9NR30 783 aaKnown RBP eCLIP16.56■□□□□ 0.24
USE1-209ENST00000601592 NIP7Q9Y221 180 aaKnown RBP eCLIP16.56■□□□□ 0.24
USE1-209ENST00000601592 CACNA1SQ13698 1873 aa16.56■□□□□ 0.24
USE1-209ENST00000601592 FANCIQ9NVI1 1328 aa16.55■□□□□ 0.24
USE1-209ENST00000601592 A0A0G2JLW4 131 aa16.55■□□□□ 0.24
USE1-209ENST00000601592 CCDC24Q8N4L8 307 aa16.55■□□□□ 0.24
USE1-209ENST00000601592 XAGE3Q8WTP9 111 aa16.55■□□□□ 0.24
USE1-209ENST00000601592 DLEC1Q9Y238 1755 aa16.54■□□□□ 0.24
USE1-209ENST00000601592 ERVV-1B6SEH8 477 aa16.54■□□□□ 0.24
USE1-209ENST00000601592 DPEP1P16444 411 aa16.54■□□□□ 0.24
USE1-209ENST00000601592 TGFB2P61812 414 aa16.54■□□□□ 0.24
USE1-209ENST00000601592 COPS6Q7L5N1 327 aa16.54■□□□□ 0.24
USE1-209ENST00000601592 NBPF5PQ86XG9 351 aaPredicted RBP16.54■□□□□ 0.24
USE1-209ENST00000601592 TSPYL6Q8N831 410 aa16.54■□□□□ 0.24
USE1-209ENST00000601592 CNBD1Q8NA66 436 aa16.54■□□□□ 0.24
USE1-209ENST00000601592 DBF4Q9UBU7 674 aaPredicted RBP16.54■□□□□ 0.24
USE1-209ENST00000601592 ARFGEF2Q9Y6D5 1785 aa16.54■□□□□ 0.24
USE1-209ENST00000601592 YBX3P16989 372 aaKnown RBP eCLIP16.53■□□□□ 0.24
USE1-209ENST00000601592 GPTP24298 496 aa16.53■□□□□ 0.24
USE1-209ENST00000601592 ST5P78524 1137 aa16.53■□□□□ 0.24
USE1-209ENST00000601592 LRP10Q7Z4F1 713 aa16.53■□□□□ 0.24
USE1-209ENST00000601592 COL11A2P13942 1736 aaPredicted RBP16.53■□□□□ 0.24
USE1-209ENST00000601592 CACNA1FO60840 1977 aa16.52■□□□□ 0.24
USE1-209ENST00000601592 RGL2O15211 777 aa16.52■□□□□ 0.24
USE1-209ENST00000601592 CHRNA5P30532 468 aa16.52■□□□□ 0.24
USE1-209ENST00000601592 GOLGA2Q08379 1002 aa16.52■□□□□ 0.24
USE1-209ENST00000601592 TWISTNBQ3B726 338 aaPredicted RBP16.52■□□□□ 0.24
USE1-209ENST00000601592 PRR5LQ6MZQ0 368 aa16.52■□□□□ 0.24
USE1-209ENST00000601592 HYPKQ9NX55 129 aa16.52■□□□□ 0.24
USE1-209ENST00000601592 TCERG1O14776 1098 aaKnown RBP16.51■□□□□ 0.23
USE1-209ENST00000601592 CCDC30Q5VVM6 783 aa16.51■□□□□ 0.23
USE1-209ENST00000601592 MYH16Q9H6N6 1097 aa16.51■□□□□ 0.23
USE1-209ENST00000601592 SPINK5Q9NQ38 1064 aaPredicted RBP16.51■□□□□ 0.23
USE1-209ENST00000601592 BCS1LQ9Y276 419 aa16.51■□□□□ 0.23
USE1-209ENST00000601592 ARFGEF1Q9Y6D6 1849 aa16.51■□□□□ 0.23
USE1-209ENST00000601592 ATP10DQ9P241 1426 aa16.51■□□□□ 0.23
USE1-209ENST00000601592 GTF2E1P29083 439 aaPredicted RBP16.5■□□□□ 0.23
USE1-209ENST00000601592 EXOSC9Q06265 439 aaKnown RBP16.5■□□□□ 0.23
USE1-209ENST00000601592 GIGYF2Q6Y7W6 1299 aaKnown RBP16.5■□□□□ 0.23
USE1-209ENST00000601592 STK31Q9BXU1 1019 aa16.5■□□□□ 0.23
USE1-209ENST00000601592 CHMP4AQ9BY43 222 aa16.5■□□□□ 0.23
USE1-209ENST00000601592 GOLGB1Q14789 3259 aaKnown RBP16.5■□□□□ 0.23
USE1-209ENST00000601592 C2CD5Q86YS7 1000 aa16.49■□□□□ 0.23
USE1-209ENST00000601592 ZNF521Q96K83 1311 aa16.48■□□□□ 0.23
USE1-209ENST00000601592 H0YIN7 160 aa16.48■□□□□ 0.23
USE1-209ENST00000601592 GRIN3BO60391 1043 aa16.48■□□□□ 0.23
USE1-209ENST00000601592 PDE6BP35913 854 aa16.48■□□□□ 0.23
USE1-209ENST00000601592 TPTE2Q6XPS3 522 aa16.48■□□□□ 0.23
USE1-209ENST00000601592 NYXQ9GZU5 481 aa16.48■□□□□ 0.23
USE1-209ENST00000601592 PIM2Q9P1W9 311 aa16.48■□□□□ 0.23
USE1-209ENST00000601592 UBN2Q6ZU65 1347 aa16.47■□□□□ 0.23
USE1-209ENST00000601592 TNRC6CQ9HCJ0 1690 aaKnown RBP16.47■□□□□ 0.23
USE1-209ENST00000601592 KCNA3P22001 575 aa16.47■□□□□ 0.23
USE1-209ENST00000601592 HSP90AB3PQ58FF7 597 aa16.47■□□□□ 0.23
USE1-209ENST00000601592 ANKRD13DQ6ZTN6 518 aa16.47■□□□□ 0.23
USE1-209ENST00000601592 NUTM1Q86Y26 1132 aa16.47■□□□□ 0.23
USE1-209ENST00000601592 BRIP1Q9BX63 1249 aa16.47■□□□□ 0.23
USE1-209ENST00000601592 PHAXQ9H814 394 aaKnown RBP16.47■□□□□ 0.23
USE1-209ENST00000601592 DALRD3Q5D0E6 543 aaKnown RBP16.46■□□□□ 0.23
USE1-209ENST00000601592 RIC3Q7Z5B4 369 aa16.46■□□□□ 0.23
USE1-209ENST00000601592 ZNF34Q8IZ26 560 aa16.46■□□□□ 0.23
USE1-209ENST00000601592 PLBD2Q8NHP8 589 aa16.46■□□□□ 0.23
USE1-209ENST00000601592 ZNF622Q969S3 477 aaKnown RBP eCLIP16.46■□□□□ 0.23
USE1-209ENST00000601592 ZNF428Q96B54 188 aa16.46■□□□□ 0.23
USE1-209ENST00000601592 SUSD4Q5VX71 490 aa16.45■□□□□ 0.22
USE1-209ENST00000601592 PPP1R42Q7Z4L9 355 aa16.45■□□□□ 0.22
USE1-209ENST00000601592 ABCC12Q96J65 1359 aa16.44■□□□□ 0.22
USE1-209ENST00000601592 IBTKQ9P2D0 1353 aaPredicted RBP16.44■□□□□ 0.22
USE1-209ENST00000601592 E9PSI1 815 aa16.44■□□□□ 0.22
USE1-209ENST00000601592 DDX58O95786 925 aaKnown RBP16.44■□□□□ 0.22
USE1-209ENST00000601592 YY1P25490 414 aa16.44■□□□□ 0.22
USE1-209ENST00000601592 TCIRG1Q13488 830 aa16.44■□□□□ 0.22
USE1-209ENST00000601592 ERFEQ4G0M1 354 aa16.44■□□□□ 0.22
USE1-209ENST00000601592 PARP10Q53GL7 1025 aa16.44■□□□□ 0.22
USE1-209ENST00000601592 PDZRN3Q9UPQ7 1066 aa16.44■□□□□ 0.22
USE1-209ENST00000601592 LAMB2P55268 1798 aa16.43■□□□□ 0.22
USE1-209ENST00000601592 ATP5J2-PTCD1G3V325 749 aa16.43■□□□□ 0.22
USE1-209ENST00000601592 VAMP4O75379 141 aa16.43■□□□□ 0.22
USE1-209ENST00000601592 NTSR2O95665 410 aa16.43■□□□□ 0.22
USE1-209ENST00000601592 SLC4A2P04920 1241 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms