RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-223ENST00000600872 CCDC184Q52MB2 194 aa16.81■□□□□ 0.28
FKRP-223ENST00000600872 TTLL7Q6ZT98 887 aa16.81■□□□□ 0.28
FKRP-223ENST00000600872 FER1L6Q2WGJ9 1857 aa16.81■□□□□ 0.28
FKRP-223ENST00000600872 CACNA1SQ13698 1873 aa16.8■□□□□ 0.28
FKRP-223ENST00000600872 H0YIN7 160 aa16.8■□□□□ 0.28
FKRP-223ENST00000600872 ZEB1P37275 1124 aaPredicted RBP16.8■□□□□ 0.28
FKRP-223ENST00000600872 TTLL6Q8N841 843 aa16.8■□□□□ 0.28
FKRP-223ENST00000600872 CNBD1Q8NA66 436 aa16.8■□□□□ 0.28
FKRP-223ENST00000600872 CEP350Q5VT06 3117 aa16.8■□□□□ 0.28
FKRP-223ENST00000600872 KLRG2A4D1S0 409 aaPredicted RBP16.79■□□□□ 0.28
FKRP-223ENST00000600872 ERVV-1B6SEH8 477 aa16.79■□□□□ 0.28
FKRP-223ENST00000600872 KIF3CO14782 793 aa16.79■□□□□ 0.28
FKRP-223ENST00000600872 LMOD3Q0VAK6 560 aa16.79■□□□□ 0.28
FKRP-223ENST00000600872 WDR43Q15061 677 aaKnown RBP eCLIP16.79■□□□□ 0.28
FKRP-223ENST00000600872 NEUROD2Q15784 382 aa16.79■□□□□ 0.28
FKRP-223ENST00000600872 C9orf131Q5VYM1 1079 aa16.79■□□□□ 0.28
FKRP-223ENST00000600872 NPM2Q86SE8 214 aaKnown RBP16.79■□□□□ 0.28
FKRP-223ENST00000600872 ZNF526Q8TF50 670 aaPredicted RBP16.79■□□□□ 0.28
FKRP-223ENST00000600872 GPBP1L1Q9HC44 474 aaPredicted RBP16.79■□□□□ 0.28
FKRP-223ENST00000600872 ERBB4Q15303 1308 aa16.78■□□□□ 0.28
FKRP-223ENST00000600872 MAP3K15Q6ZN16 1313 aa16.78■□□□□ 0.28
FKRP-223ENST00000600872 SRGNP10124 158 aa16.78■□□□□ 0.28
FKRP-223ENST00000600872 PDE6BP35913 854 aa16.78■□□□□ 0.28
FKRP-223ENST00000600872 RASSF7Q02833 373 aa16.78■□□□□ 0.28
FKRP-223ENST00000600872 KRT24Q2M2I5 525 aa16.78■□□□□ 0.28
FKRP-223ENST00000600872 PROSER3Q2NL68 480 aa16.78■□□□□ 0.28
FKRP-223ENST00000600872 PDZRN3Q9UPQ7 1066 aa16.78■□□□□ 0.28
FKRP-223ENST00000600872 NIP7Q9Y221 180 aaKnown RBP eCLIP16.78■□□□□ 0.28
FKRP-223ENST00000600872 ZNF652Q9Y2D9 606 aa16.78■□□□□ 0.28
FKRP-223ENST00000600872 TNRC6CQ9HCJ0 1690 aaKnown RBP16.78■□□□□ 0.28
FKRP-223ENST00000600872 NFKBIEO00221 500 aa16.77■□□□□ 0.28
FKRP-223ENST00000600872 DICER1Q9UPY3 1922 aaKnown RBP16.76■□□□□ 0.27
FKRP-223ENST00000600872 UBN2Q6ZU65 1347 aa16.76■□□□□ 0.27
FKRP-223ENST00000600872 MYL6BP14649 208 aa16.76■□□□□ 0.27
FKRP-223ENST00000600872 NBPF5PQ86XG9 351 aaPredicted RBP16.76■□□□□ 0.27
FKRP-223ENST00000600872 NGEFQ8N5V2 710 aa16.76■□□□□ 0.27
FKRP-223ENST00000600872 ANXA1P04083 346 aa16.75■□□□□ 0.27
FKRP-223ENST00000600872 ZNF853P0CG23 659 aa16.75■□□□□ 0.27
FKRP-223ENST00000600872 ST5P78524 1137 aa16.75■□□□□ 0.27
FKRP-223ENST00000600872 C7orf43Q8WVR3 580 aa16.75■□□□□ 0.27
FKRP-223ENST00000600872 APAF1O14727 1248 aa16.74■□□□□ 0.27
FKRP-223ENST00000600872 STYK1Q6J9G0 422 aa16.74■□□□□ 0.27
FKRP-223ENST00000600872 ZNF34Q8IZ26 560 aa16.74■□□□□ 0.27
FKRP-223ENST00000600872 ZNF622Q969S3 477 aaKnown RBP eCLIP16.74■□□□□ 0.27
FKRP-223ENST00000600872 RNF181Q9P0P0 153 aa16.74■□□□□ 0.27
FKRP-223ENST00000600872 ABCC12Q96J65 1359 aa16.74■□□□□ 0.27
FKRP-223ENST00000600872 EIF2S2P20042 333 aaKnown RBP16.73■□□□□ 0.27
FKRP-223ENST00000600872 TPTE2Q6XPS3 522 aa16.73■□□□□ 0.27
FKRP-223ENST00000600872 GIGYF2Q6Y7W6 1299 aaKnown RBP16.73■□□□□ 0.27
FKRP-223ENST00000600872 MASTLQ96GX5 879 aa16.73■□□□□ 0.27
FKRP-223ENST00000600872 ZBTB3Q9H5J0 574 aa16.73■□□□□ 0.27
FKRP-223ENST00000600872 ANKRD36CQ5JPF3 1778 aa16.73■□□□□ 0.27
FKRP-223ENST00000600872 TIAM2Q8IVF5 1701 aa16.73■□□□□ 0.27
FKRP-223ENST00000600872 ZNF316A6NFI3 1004 aaPredicted RBP16.72■□□□□ 0.27
FKRP-223ENST00000600872 C21orf2O43822 256 aa16.72■□□□□ 0.27
FKRP-223ENST00000600872 PRPF40BQ6NWY9 871 aaKnown RBP16.72■□□□□ 0.27
FKRP-223ENST00000600872 CFAP44Q96MT7 982 aa16.72■□□□□ 0.27
FKRP-223ENST00000600872 NMRK2Q9NPI5 230 aa16.72■□□□□ 0.27
FKRP-223ENST00000600872 IBTKQ9P2D0 1353 aaPredicted RBP16.72■□□□□ 0.27
FKRP-223ENST00000600872 RIC1Q4ADV7 1423 aa16.71■□□□□ 0.27
FKRP-223ENST00000600872 FAM177BA6PVY3 158 aa16.71■□□□□ 0.27
FKRP-223ENST00000600872 LMNB1P20700 586 aa16.71■□□□□ 0.27
FKRP-223ENST00000600872 CRY2Q49AN0 593 aa16.71■□□□□ 0.27
FKRP-223ENST00000600872 SUSD4Q5VX71 490 aa16.71■□□□□ 0.27
FKRP-223ENST00000600872 KIF6Q6ZMV9 814 aa16.71■□□□□ 0.27
FKRP-223ENST00000600872 CNKSR1Q969H4 720 aa16.71■□□□□ 0.27
FKRP-223ENST00000600872 SNED1Q8TER0 1413 aa16.7■□□□□ 0.26
FKRP-223ENST00000600872 NTSR2O95665 410 aa16.7■□□□□ 0.26
FKRP-223ENST00000600872 NPR1P16066 1061 aa16.7■□□□□ 0.26
FKRP-223ENST00000600872 GPTP24298 496 aa16.7■□□□□ 0.26
FKRP-223ENST00000600872 NUTM1Q86Y26 1132 aa16.7■□□□□ 0.26
FKRP-223ENST00000600872 NECTIN2Q92692 538 aa16.7■□□□□ 0.26
FKRP-223ENST00000600872 DDX21Q9NR30 783 aaKnown RBP eCLIP16.7■□□□□ 0.26
FKRP-223ENST00000600872 MBIPQ9NS73 344 aa16.7■□□□□ 0.26
FKRP-223ENST00000600872 LTBP3Q9NS15 1303 aa16.7■□□□□ 0.26
FKRP-223ENST00000600872 ZC3H4Q9UPT8 1303 aaKnown RBP16.7■□□□□ 0.26
FKRP-223ENST00000600872 HOXB7P09629 217 aa16.69■□□□□ 0.26
FKRP-223ENST00000600872 ERFEQ4G0M1 354 aa16.69■□□□□ 0.26
FKRP-223ENST00000600872 COPS6Q7L5N1 327 aa16.69■□□□□ 0.26
FKRP-223ENST00000600872 ZNF219Q9P2Y4 722 aaPredicted RBP16.69■□□□□ 0.26
FKRP-223ENST00000600872 LAS1LQ9Y4W2 734 aaKnown RBP16.69■□□□□ 0.26
FKRP-223ENST00000600872 SENP3-EIF4A1A0A087X0R7 540 aa16.68■□□□□ 0.26
FKRP-223ENST00000600872 NPHP1O15259 732 aa16.68■□□□□ 0.26
FKRP-223ENST00000600872 XAGE3Q8WTP9 111 aa16.68■□□□□ 0.26
FKRP-223ENST00000600872 LAMB2P55268 1798 aa16.68■□□□□ 0.26
FKRP-223ENST00000600872 OLFM4Q6UX06 510 aa16.67■□□□□ 0.26
FKRP-223ENST00000600872 C3orf67Q6ZVT6 689 aa16.67■□□□□ 0.26
FKRP-223ENST00000600872 NYXQ9GZU5 481 aa16.67■□□□□ 0.26
FKRP-223ENST00000600872 CHPF2Q9P2E5 772 aa16.67■□□□□ 0.26
FKRP-223ENST00000600872 DUSP27Q5VZP5 1158 aa16.66■□□□□ 0.26
FKRP-223ENST00000600872 IFT57Q9NWB7 429 aa16.66■□□□□ 0.26
FKRP-223ENST00000600872 TOMM70O94826 608 aa16.65■□□□□ 0.26
FKRP-223ENST00000600872 HOXA10P31260 410 aaPredicted RBP16.65■□□□□ 0.26
FKRP-223ENST00000600872 SLC51AQ86UW1 340 aa16.65■□□□□ 0.26
FKRP-223ENST00000600872 WDR90Q96KV7 1748 aa16.65■□□□□ 0.26
FKRP-223ENST00000600872 GLTPD2A6NH11 291 aa16.64■□□□□ 0.25
FKRP-223ENST00000600872 POTECB2RU33 542 aa16.64■□□□□ 0.25
FKRP-223ENST00000600872 AIMP1Q12904 312 aaKnown RBP16.64■□□□□ 0.25
FKRP-223ENST00000600872 PARP10Q53GL7 1025 aa16.64■□□□□ 0.25
FKRP-223ENST00000600872 SLC10A5Q5PT55 438 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms