RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 NBPF6Q5VWK0 638 aa6.37□□□□□ -1.39
HERC3-213ENST00000598772 NBPF4Q96M43 638 aa6.37□□□□□ -1.39
HERC3-213ENST00000598772 MKI67P46013 3256 aaKnown RBP6.37□□□□□ -1.39
HERC3-213ENST00000598772 EPS15P42566 896 aa6.36□□□□□ -1.39
HERC3-213ENST00000598772 FAM122AQ96E09 287 aa6.36□□□□□ -1.39
HERC3-213ENST00000598772 GLIS2Q9BZE0 524 aaPredicted RBP6.36□□□□□ -1.39
HERC3-213ENST00000598772 SCUBE2Q9NQ36 999 aa6.36□□□□□ -1.39
HERC3-213ENST00000598772 SAGE1Q9NXZ1 904 aa6.36□□□□□ -1.39
HERC3-213ENST00000598772 RBM27Q9P2N5 1060 aaKnown RBP6.36□□□□□ -1.39
HERC3-213ENST00000598772 SCN4AP35499 1836 aa6.36□□□□□ -1.39
HERC3-213ENST00000598772 CGNL1Q0VF96 1302 aa6.35□□□□□ -1.39
HERC3-213ENST00000598772 USP42Q9H9J4 1324 aaKnown RBP6.35□□□□□ -1.39
HERC3-213ENST00000598772 CENPJQ9HC77 1338 aaPredicted RBP6.35□□□□□ -1.39
HERC3-213ENST00000598772 PTCD1O75127 700 aaKnown RBP6.35□□□□□ -1.39
HERC3-213ENST00000598772 TBC1D8O95759 1140 aa6.35□□□□□ -1.39
HERC3-213ENST00000598772 ZNF157P51786 506 aaPredicted RBP6.35□□□□□ -1.39
HERC3-213ENST00000598772 EIF6P56537 245 aaKnown RBP6.35□□□□□ -1.39
HERC3-213ENST00000598772 NFIXQ14938 502 aa6.35□□□□□ -1.39
HERC3-213ENST00000598772 FBXO46Q6PJ61 603 aaPredicted RBP6.35□□□□□ -1.39
HERC3-213ENST00000598772 TMC1Q8TDI8 760 aa6.35□□□□□ -1.39
HERC3-213ENST00000598772 ADAMTS7Q9UKP4 1686 aa6.35□□□□□ -1.39
HERC3-213ENST00000598772 PRR29P0C7W0 189 aa6.34□□□□□ -1.39
HERC3-213ENST00000598772 HOXC9P31274 260 aa6.34□□□□□ -1.39
HERC3-213ENST00000598772 PDE6BP35913 854 aa6.34□□□□□ -1.39
HERC3-213ENST00000598772 CRKLP46109 303 aaKnown RBP6.34□□□□□ -1.39
HERC3-213ENST00000598772 RGMBQ6NW40 437 aa6.34□□□□□ -1.39
HERC3-213ENST00000598772 GPC2Q8N158 579 aa6.34□□□□□ -1.39
HERC3-213ENST00000598772 ZNF296Q8WUU4 475 aaPredicted RBP6.34□□□□□ -1.39
HERC3-213ENST00000598772 DPF3Q92784 378 aa6.34□□□□□ -1.39
HERC3-213ENST00000598772 SLC4A9Q96Q91 983 aa6.34□□□□□ -1.39
HERC3-213ENST00000598772 THSD7BQ9C0I4 1608 aa6.34□□□□□ -1.39
HERC3-213ENST00000598772 USP31Q70CQ4 1352 aa6.33□□□□□ -1.4
HERC3-213ENST00000598772 DICER1Q9UPY3 1922 aaKnown RBP6.33□□□□□ -1.4
HERC3-213ENST00000598772 EVC2Q86UK5 1308 aa6.33□□□□□ -1.4
HERC3-213ENST00000598772 LTBP3Q9NS15 1303 aa6.33□□□□□ -1.4
HERC3-213ENST00000598772 SOGA3Q5TF21 947 aa6.33□□□□□ -1.4
HERC3-213ENST00000598772 PRPF40BQ6NWY9 871 aaKnown RBP6.33□□□□□ -1.4
HERC3-213ENST00000598772 DLK2Q6UY11 383 aa6.33□□□□□ -1.4
HERC3-213ENST00000598772 USP50Q70EL3 339 aaPredicted RBP6.33□□□□□ -1.4
HERC3-213ENST00000598772 JDP2Q8WYK2 163 aa6.33□□□□□ -1.4
HERC3-213ENST00000598772 CNKSR1Q969H4 720 aa6.33□□□□□ -1.4
HERC3-213ENST00000598772 CCDC102AQ96A19 550 aa6.33□□□□□ -1.4
HERC3-213ENST00000598772 LRCH3Q96II8 777 aa6.33□□□□□ -1.4
HERC3-213ENST00000598772 HHIPL1Q96JK4 782 aa6.33□□□□□ -1.4
HERC3-213ENST00000598772 CSRNP1Q96S65 589 aa6.33□□□□□ -1.4
HERC3-213ENST00000598772 SSUH2Q9Y2M2 353 aa6.33□□□□□ -1.4
HERC3-213ENST00000598772 LTN1O94822 1766 aa6.33□□□□□ -1.4
HERC3-213ENST00000598772 CNTNAP4Q9C0A0 1308 aa6.32□□□□□ -1.4
HERC3-213ENST00000598772 KIAA0100Q14667 2235 aaKnown RBP6.32□□□□□ -1.4
HERC3-213ENST00000598772 ST18O60284 1047 aa6.32□□□□□ -1.4
HERC3-213ENST00000598772 MYCP01106 439 aaPredicted RBP6.32□□□□□ -1.4
HERC3-213ENST00000598772 INTS3Q68E01 1043 aaKnown RBP6.32□□□□□ -1.4
HERC3-213ENST00000598772 USP48Q86UV5 1035 aa6.32□□□□□ -1.4
HERC3-213ENST00000598772 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.32□□□□□ -1.4
HERC3-213ENST00000598772 C2orf69Q8N8R5 385 aa6.32□□□□□ -1.4
HERC3-213ENST00000598772 TMEM106CQ9BVX2 250 aa6.32□□□□□ -1.4
HERC3-213ENST00000598772 SPG7Q9UQ90 795 aa6.32□□□□□ -1.4
HERC3-213ENST00000598772 CD163L1Q9NR16 1453 aa6.32□□□□□ -1.4
HERC3-213ENST00000598772 TRPM7Q96QT4 1865 aa6.32□□□□□ -1.4
HERC3-213ENST00000598772 ITGB4P16144 1822 aa6.32□□□□□ -1.4
HERC3-213ENST00000598772 MAP3K19Q56UN5 1328 aa6.31□□□□□ -1.4
HERC3-213ENST00000598772 UNC80Q8N2C7 3258 aa6.31□□□□□ -1.4
HERC3-213ENST00000598772 PLA2G5P39877 138 aa6.31□□□□□ -1.4
HERC3-213ENST00000598772 IARSP41252 1262 aaKnown RBP6.31□□□□□ -1.4
HERC3-213ENST00000598772 FKBP4Q02790 459 aaKnown RBP eCLIP6.31□□□□□ -1.4
HERC3-213ENST00000598772 CCDC93Q567U6 631 aa6.31□□□□□ -1.4
HERC3-213ENST00000598772 OLFM4Q6UX06 510 aa6.31□□□□□ -1.4
HERC3-213ENST00000598772 DEFB123Q8N688 67 aa6.31□□□□□ -1.4
HERC3-213ENST00000598772 CARMIL3Q8ND23 1372 aa6.31□□□□□ -1.4
HERC3-213ENST00000598772 FAM155AB1AL88 458 aaPredicted RBP6.3□□□□□ -1.4
HERC3-213ENST00000598772 FZD9O00144 591 aa6.3□□□□□ -1.4
HERC3-213ENST00000598772 SOX1O00570 391 aaPredicted RBP6.3□□□□□ -1.4
HERC3-213ENST00000598772 RRS1Q15050 365 aaKnown RBP6.3□□□□□ -1.4
HERC3-213ENST00000598772 ANKRD13DQ6ZTN6 518 aa6.3□□□□□ -1.4
HERC3-213ENST00000598772 Q7L0L9 218 aa6.3□□□□□ -1.4
HERC3-213ENST00000598772 HDGFL2Q7Z4V5 671 aaPredicted RBP6.3□□□□□ -1.4
HERC3-213ENST00000598772 BRIP1Q9BX63 1249 aa6.3□□□□□ -1.4
HERC3-213ENST00000598772 RGPD2P0DJD1 1756 aa6.3□□□□□ -1.4
HERC3-213ENST00000598772 MAP2P11137 1827 aaKnown RBP6.29□□□□□ -1.4
HERC3-213ENST00000598772 AKAP11Q9UKA4 1901 aa6.29□□□□□ -1.4
HERC3-213ENST00000598772 GPR25O00155 361 aa6.29□□□□□ -1.4
HERC3-213ENST00000598772 C7P10643 843 aa6.29□□□□□ -1.4
HERC3-213ENST00000598772 SCNN1DP51172 638 aa6.29□□□□□ -1.4
HERC3-213ENST00000598772 CABP4P57796 275 aa6.29□□□□□ -1.4
HERC3-213ENST00000598772 NKX1-1Q15270 411 aaPredicted RBP6.29□□□□□ -1.4
HERC3-213ENST00000598772 SLC4A8Q2Y0W8 1093 aa6.29□□□□□ -1.4
HERC3-213ENST00000598772 CDC37L1Q7L3B6 337 aa6.29□□□□□ -1.4
HERC3-213ENST00000598772 SMG6Q86US8 1419 aaKnown RBP6.29□□□□□ -1.4
HERC3-213ENST00000598772 COG3Q96JB2 828 aa6.29□□□□□ -1.4
HERC3-213ENST00000598772 GBA2Q9HCG7 927 aaPredicted RBP6.29□□□□□ -1.4
HERC3-213ENST00000598772 ADARB2Q9NS39 739 aaKnown RBP6.29□□□□□ -1.4
HERC3-213ENST00000598772 PDZRN3Q9UPQ7 1066 aa6.29□□□□□ -1.4
HERC3-213ENST00000598772 TRIM17Q9Y577 477 aa6.29□□□□□ -1.4
HERC3-213ENST00000598772 ADAMTSL1Q8N6G6 1762 aa6.29□□□□□ -1.4
HERC3-213ENST00000598772 FER1L6Q2WGJ9 1857 aa6.28□□□□□ -1.4
HERC3-213ENST00000598772 TMEM265A0A087WTH1 108 aa6.28□□□□□ -1.4
HERC3-213ENST00000598772 FKTNO75072 461 aa6.28□□□□□ -1.4
HERC3-213ENST00000598772 KCNA4P22459 653 aa6.28□□□□□ -1.4
HERC3-213ENST00000598772 STYK1Q6J9G0 422 aa6.28□□□□□ -1.4
HERC3-213ENST00000598772 INTS5Q6P9B9 1019 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms