RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 ZNF652Q9Y2D9 606 aa22.9■■□□□ 1.26
USHBP1-209ENST00000598570 ZNF330Q9Y3S2 320 aaPredicted RBP22.9■■□□□ 1.26
USHBP1-209ENST00000598570 ATP10DQ9P241 1426 aa22.9■■□□□ 1.26
USHBP1-209ENST00000598570 SETDB2Q96T68 719 aa22.89■■□□□ 1.25
USHBP1-209ENST00000598570 CHMP4AQ9BY43 222 aa22.89■■□□□ 1.25
USHBP1-209ENST00000598570 DBF4Q9UBU7 674 aaPredicted RBP22.89■■□□□ 1.25
USHBP1-209ENST00000598570 MYL6BP14649 208 aa22.88■■□□□ 1.25
USHBP1-209ENST00000598570 HDGFL1Q5TGJ6 251 aa22.88■■□□□ 1.25
USHBP1-209ENST00000598570 GIGYF2Q6Y7W6 1299 aaKnown RBP22.88■■□□□ 1.25
USHBP1-209ENST00000598570 YBX3P16989 372 aaKnown RBP eCLIP22.87■■□□□ 1.25
USHBP1-209ENST00000598570 ZNF34Q8IZ26 560 aa22.87■■□□□ 1.25
USHBP1-209ENST00000598570 MIER1Q8N108 512 aa22.87■■□□□ 1.25
USHBP1-209ENST00000598570 SPINK5Q9NQ38 1064 aaPredicted RBP22.87■■□□□ 1.25
USHBP1-209ENST00000598570 UTRNP46939 3433 aa22.86■■□□□ 1.25
USHBP1-209ENST00000598570 KLRG2A4D1S0 409 aaPredicted RBP22.86■■□□□ 1.25
USHBP1-209ENST00000598570 PRR5LQ6MZQ0 368 aa22.86■■□□□ 1.25
USHBP1-209ENST00000598570 KLHL34Q8N239 644 aa22.86■■□□□ 1.25
USHBP1-209ENST00000598570 TSPYL6Q8N831 410 aa22.86■■□□□ 1.25
USHBP1-209ENST00000598570 TSR2Q969E8 191 aaKnown RBP22.86■■□□□ 1.25
USHBP1-209ENST00000598570 BRIP1Q9BX63 1249 aa22.86■■□□□ 1.25
USHBP1-209ENST00000598570 HYPKQ9NX55 129 aa22.86■■□□□ 1.25
USHBP1-209ENST00000598570 CHPF2Q9P2E5 772 aa22.86■■□□□ 1.25
USHBP1-209ENST00000598570 N4BP2Q86UW6 1770 aaPredicted RBP22.86■■□□□ 1.25
USHBP1-209ENST00000598570 ANKRD31Q8N7Z5 1873 aa22.85■■□□□ 1.25
USHBP1-209ENST00000598570 A0A0G2JLW4 131 aa22.85■■□□□ 1.25
USHBP1-209ENST00000598570 DCAF8L1A6NGE4 600 aa22.85■■□□□ 1.25
USHBP1-209ENST00000598570 DPEP1P16444 411 aa22.85■■□□□ 1.25
USHBP1-209ENST00000598570 COPS6Q7L5N1 327 aa22.85■■□□□ 1.25
USHBP1-209ENST00000598570 PDZRN3Q9UPQ7 1066 aa22.85■■□□□ 1.25
USHBP1-209ENST00000598570 FANCIQ9NVI1 1328 aa22.84■■□□□ 1.25
USHBP1-209ENST00000598570 ANXA1P04083 346 aa22.84■■□□□ 1.25
USHBP1-209ENST00000598570 KIF6Q6ZMV9 814 aa22.84■■□□□ 1.25
USHBP1-209ENST00000598570 BICDL1Q6ZP65 573 aa22.84■■□□□ 1.25
USHBP1-209ENST00000598570 IBTKQ9P2D0 1353 aaPredicted RBP22.84■■□□□ 1.25
USHBP1-209ENST00000598570 SENP3-EIF4A1A0A087X0R7 540 aa22.83■■□□□ 1.25
USHBP1-209ENST00000598570 GRIN3BO60391 1043 aa22.83■■□□□ 1.25
USHBP1-209ENST00000598570 XAGE3Q8WTP9 111 aa22.83■■□□□ 1.25
USHBP1-209ENST00000598570 DLEC1Q9Y238 1755 aa22.83■■□□□ 1.24
USHBP1-209ENST00000598570 NIP7Q9Y221 180 aaKnown RBP eCLIP22.82■■□□□ 1.24
USHBP1-209ENST00000598570 CACNA1FO60840 1977 aa22.81■■□□□ 1.24
USHBP1-209ENST00000598570 GPR162Q16538 588 aa22.81■■□□□ 1.24
USHBP1-209ENST00000598570 CCDC30Q5VVM6 783 aa22.81■■□□□ 1.24
USHBP1-209ENST00000598570 TPTE2Q6XPS3 522 aa22.81■■□□□ 1.24
USHBP1-209ENST00000598570 PLBD2Q8NHP8 589 aa22.81■■□□□ 1.24
USHBP1-209ENST00000598570 NECTIN2Q92692 538 aa22.81■■□□□ 1.24
USHBP1-209ENST00000598570 CHD4Q14839 1912 aa22.8■■□□□ 1.24
USHBP1-209ENST00000598570 ELL2O00472 640 aaPredicted RBP22.8■■□□□ 1.24
USHBP1-209ENST00000598570 VAMP4O75379 141 aa22.8■■□□□ 1.24
USHBP1-209ENST00000598570 TRMT2AQ8IZ69 625 aaKnown RBP22.8■■□□□ 1.24
USHBP1-209ENST00000598570 ZBTB3Q9H5J0 574 aa22.8■■□□□ 1.24
USHBP1-209ENST00000598570 RIC1Q4ADV7 1423 aa22.8■■□□□ 1.24
USHBP1-209ENST00000598570 ARFGEF1Q9Y6D6 1849 aa22.8■■□□□ 1.24
USHBP1-209ENST00000598570 UBN2Q6ZU65 1347 aa22.8■■□□□ 1.24
USHBP1-209ENST00000598570 GOLGA2Q08379 1002 aa22.79■■□□□ 1.24
USHBP1-209ENST00000598570 TRIM28Q13263 835 aaKnown RBP22.79■■□□□ 1.24
USHBP1-209ENST00000598570 TCIRG1Q13488 830 aa22.79■■□□□ 1.24
USHBP1-209ENST00000598570 TWISTNBQ3B726 338 aaPredicted RBP22.79■■□□□ 1.24
USHBP1-209ENST00000598570 ANKRD13DQ6ZTN6 518 aa22.79■■□□□ 1.24
USHBP1-209ENST00000598570 CNBD1Q8NA66 436 aa22.79■■□□□ 1.24
USHBP1-209ENST00000598570 MYH16Q9H6N6 1097 aa22.79■■□□□ 1.24
USHBP1-209ENST00000598570 PIM2Q9P1W9 311 aa22.79■■□□□ 1.24
USHBP1-209ENST00000598570 SALL2Q9Y467 1007 aaPredicted RBP22.79■■□□□ 1.24
USHBP1-209ENST00000598570 PDE6BP35913 854 aa22.78■■□□□ 1.24
USHBP1-209ENST00000598570 PARP10Q53GL7 1025 aa22.78■■□□□ 1.24
USHBP1-209ENST00000598570 NBPF5PQ86XG9 351 aaPredicted RBP22.78■■□□□ 1.24
USHBP1-209ENST00000598570 ANKRD36CQ5JPF3 1778 aa22.78■■□□□ 1.24
USHBP1-209ENST00000598570 CHRNA5P30532 468 aa22.77■■□□□ 1.24
USHBP1-209ENST00000598570 HSP90AB3PQ58FF7 597 aa22.77■■□□□ 1.24
USHBP1-209ENST00000598570 SLC10A5Q5PT55 438 aa22.77■■□□□ 1.24
USHBP1-209ENST00000598570 SUSD4Q5VX71 490 aa22.76■■□□□ 1.23
USHBP1-209ENST00000598570 ISCA1Q9BUE6 129 aa22.76■■□□□ 1.23
USHBP1-209ENST00000598570 NYXQ9GZU5 481 aa22.76■■□□□ 1.23
USHBP1-209ENST00000598570 RNF123Q5XPI4 1314 aa22.76■■□□□ 1.23
USHBP1-209ENST00000598570 NTSR2O95665 410 aa22.75■■□□□ 1.23
USHBP1-209ENST00000598570 SRGNP10124 158 aa22.75■■□□□ 1.23
USHBP1-209ENST00000598570 EXOSC9Q06265 439 aaKnown RBP22.75■■□□□ 1.23
USHBP1-209ENST00000598570 SLFN5Q08AF3 891 aa22.75■■□□□ 1.23
USHBP1-209ENST00000598570 PHAXQ9H814 394 aaKnown RBP22.75■■□□□ 1.23
USHBP1-209ENST00000598570 H0YIN7 160 aa22.74■■□□□ 1.23
USHBP1-209ENST00000598570 ST5P78524 1137 aa22.74■■□□□ 1.23
USHBP1-209ENST00000598570 AIMP1Q12904 312 aaKnown RBP22.74■■□□□ 1.23
USHBP1-209ENST00000598570 CRY2Q49AN0 593 aa22.74■■□□□ 1.23
USHBP1-209ENST00000598570 NLRP10Q86W26 655 aa22.74■■□□□ 1.23
USHBP1-209ENST00000598570 E9PSI1 815 aa22.73■■□□□ 1.23
USHBP1-209ENST00000598570 DALRD3Q5D0E6 543 aaKnown RBP22.73■■□□□ 1.23
USHBP1-209ENST00000598570 STYK1Q6J9G0 422 aa22.73■■□□□ 1.23
USHBP1-209ENST00000598570 C2CD5Q86YS7 1000 aa22.73■■□□□ 1.23
USHBP1-209ENST00000598570 COL11A2P13942 1736 aaPredicted RBP22.73■■□□□ 1.23
USHBP1-209ENST00000598570 PPP1R42Q7Z4L9 355 aa22.72■■□□□ 1.23
USHBP1-209ENST00000598570 TTLL6Q8N841 843 aa22.71■■□□□ 1.23
USHBP1-209ENST00000598570 ARFGEF2Q9Y6D5 1785 aa22.71■■□□□ 1.23
USHBP1-209ENST00000598570 GPTP24298 496 aa22.7■■□□□ 1.22
USHBP1-209ENST00000598570 HOXA10P31260 410 aaPredicted RBP22.7■■□□□ 1.22
USHBP1-209ENST00000598570 CCDC24Q8N4L8 307 aa22.7■■□□□ 1.22
USHBP1-209ENST00000598570 ABCC12Q96J65 1359 aa22.69■■□□□ 1.22
USHBP1-209ENST00000598570 SLC4A2P04920 1241 aa22.69■■□□□ 1.22
USHBP1-209ENST00000598570 ERFEQ4G0M1 354 aa22.69■■□□□ 1.22
USHBP1-209ENST00000598570 C7orf43Q8WVR3 580 aa22.69■■□□□ 1.22
USHBP1-209ENST00000598570 MASTLQ96GX5 879 aa22.69■■□□□ 1.22
USHBP1-209ENST00000598570 UTP14AQ9BVJ6 771 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms