RNA–Protein interactions for RNA: ENST00000597641.1

PRKD2-210, Transcript of protein kinase D2, humanhuman

TSL 4

Gene PRKD2, Length 456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-210ENST00000597641 U2AF1Q01081 240 aaKnown RBP eCLIP20.3■□□□□ 0.84
PRKD2-210ENST00000597641 SETDB2Q96T68 719 aa20.3■□□□□ 0.84
PRKD2-210ENST00000597641 NUP98P52948 1817 aa20.3■□□□□ 0.84
PRKD2-210ENST00000597641 LAMB4A4D0S4 1761 aa20.29■□□□□ 0.84
PRKD2-210ENST00000597641 VEGFAP15692 232 aaPredicted RBP20.29■□□□□ 0.84
PRKD2-210ENST00000597641 JMYQ8N9B5 988 aa20.29■□□□□ 0.84
PRKD2-210ENST00000597641 CNBD1Q8NA66 436 aa20.29■□□□□ 0.84
PRKD2-210ENST00000597641 SMC1BQ8NDV3 1235 aa20.29■□□□□ 0.84
PRKD2-210ENST00000597641 CFAP53Q96M91 514 aa20.29■□□□□ 0.84
PRKD2-210ENST00000597641 KDM3BQ7LBC6 1761 aa20.29■□□□□ 0.84
PRKD2-210ENST00000597641 SRGNP10124 158 aa20.28■□□□□ 0.84
PRKD2-210ENST00000597641 MIS18AQ9NYP9 233 aa20.28■□□□□ 0.84
PRKD2-210ENST00000597641 PRPF40BQ6NWY9 871 aaKnown RBP20.27■□□□□ 0.84
PRKD2-210ENST00000597641 OLFM4Q6UX06 510 aa20.26■□□□□ 0.83
PRKD2-210ENST00000597641 C7orf43Q8WVR3 580 aa20.26■□□□□ 0.83
PRKD2-210ENST00000597641 SNRPA1P09661 255 aaKnown RBP20.25■□□□□ 0.83
PRKD2-210ENST00000597641 POTEIP0CG38 1075 aa20.25■□□□□ 0.83
PRKD2-210ENST00000597641 POTEJP0CG39 1038 aa20.25■□□□□ 0.83
PRKD2-210ENST00000597641 HLFQ16534 295 aa20.25■□□□□ 0.83
PRKD2-210ENST00000597641 ERFEQ4G0M1 354 aa20.25■□□□□ 0.83
PRKD2-210ENST00000597641 STYK1Q6J9G0 422 aa20.25■□□□□ 0.83
PRKD2-210ENST00000597641 PDZRN3Q9UPQ7 1066 aa20.25■□□□□ 0.83
PRKD2-210ENST00000597641 NUDCQ9Y266 331 aa20.25■□□□□ 0.83
PRKD2-210ENST00000597641 COL13A1Q5TAT6 717 aaPredicted RBP20.24■□□□□ 0.83
PRKD2-210ENST00000597641 MASTLQ96GX5 879 aa20.24■□□□□ 0.83
PRKD2-210ENST00000597641 LTBP3Q9NS15 1303 aa20.24■□□□□ 0.83
PRKD2-210ENST00000597641 DDNO94850 711 aaPredicted RBP20.23■□□□□ 0.83
PRKD2-210ENST00000597641 ST5P78524 1137 aa20.23■□□□□ 0.83
PRKD2-210ENST00000597641 NBPF5PQ86XG9 351 aaPredicted RBP20.23■□□□□ 0.83
PRKD2-210ENST00000597641 RTF1Q92541 710 aaKnown RBP20.23■□□□□ 0.83
PRKD2-210ENST00000597641 CNKSR1Q969H4 720 aa20.23■□□□□ 0.83
PRKD2-210ENST00000597641 TAOK3Q9H2K8 898 aa20.23■□□□□ 0.83
PRKD2-210ENST00000597641 FAM177BA6PVY3 158 aa20.22■□□□□ 0.83
PRKD2-210ENST00000597641 CLEC4GQ6UXB4 293 aa20.22■□□□□ 0.83
PRKD2-210ENST00000597641 KLRG2A4D1S0 409 aaPredicted RBP20.21■□□□□ 0.83
PRKD2-210ENST00000597641 NPHP1O15259 732 aa20.21■□□□□ 0.83
PRKD2-210ENST00000597641 NPM2Q86SE8 214 aaKnown RBP20.21■□□□□ 0.83
PRKD2-210ENST00000597641 THUMPD2Q9BTF0 503 aaKnown RBP20.21■□□□□ 0.83
PRKD2-210ENST00000597641 NIP7Q9Y221 180 aaKnown RBP eCLIP20.21■□□□□ 0.83
PRKD2-210ENST00000597641 TAF7Q15545 349 aaPredicted RBP20.2■□□□□ 0.82
PRKD2-210ENST00000597641 SLC51AQ86UW1 340 aa20.2■□□□□ 0.82
PRKD2-210ENST00000597641 SCN4AP35499 1836 aa20.2■□□□□ 0.82
PRKD2-210ENST00000597641 HTATSF1O43719 755 aaKnown RBP20.19■□□□□ 0.82
PRKD2-210ENST00000597641 DPY19L2Q6NUT2 758 aa20.19■□□□□ 0.82
PRKD2-210ENST00000597641 PLEKHF1Q96S99 279 aa20.19■□□□□ 0.82
PRKD2-210ENST00000597641 ABCC12Q96J65 1359 aa20.18■□□□□ 0.82
PRKD2-210ENST00000597641 NGEFQ8N5V2 710 aa20.17■□□□□ 0.82
PRKD2-210ENST00000597641 SNED1Q8TER0 1413 aa20.17■□□□□ 0.82
PRKD2-210ENST00000597641 NPR1P16066 1061 aa20.16■□□□□ 0.82
PRKD2-210ENST00000597641 TTLL7Q6ZT98 887 aa20.16■□□□□ 0.82
PRKD2-210ENST00000597641 ZNF277Q9NRM2 450 aaPredicted RBP20.16■□□□□ 0.82
PRKD2-210ENST00000597641 ZNF652Q9Y2D9 606 aa20.16■□□□□ 0.82
PRKD2-210ENST00000597641 ZNF541Q9H0D2 1346 aa20.16■□□□□ 0.82
PRKD2-210ENST00000597641 COL4A5P29400 1685 aa20.16■□□□□ 0.82
PRKD2-210ENST00000597641 EIF4A1P60842 406 aaKnown RBP20.15■□□□□ 0.82
PRKD2-210ENST00000597641 TPTE2Q6XPS3 522 aa20.15■□□□□ 0.82
PRKD2-210ENST00000597641 NUTM1Q86Y26 1132 aa20.15■□□□□ 0.82
PRKD2-210ENST00000597641 ADAMTSL1Q8N6G6 1762 aa20.15■□□□□ 0.82
PRKD2-210ENST00000597641 CCDC93Q567U6 631 aa20.14■□□□□ 0.81
PRKD2-210ENST00000597641 FKBP4Q02790 459 aaKnown RBP eCLIP20.13■□□□□ 0.81
PRKD2-210ENST00000597641 CHADLQ6NUI6 762 aa20.13■□□□□ 0.81
PRKD2-210ENST00000597641 UBN2Q6ZU65 1347 aa20.12■□□□□ 0.81
PRKD2-210ENST00000597641 RGL2O15211 777 aa20.12■□□□□ 0.81
PRKD2-210ENST00000597641 HSPA1AP0DMV8 641 aaKnown RBP20.12■□□□□ 0.81
PRKD2-210ENST00000597641 HSPA1BP0DMV9 641 aaKnown RBP20.12■□□□□ 0.81
PRKD2-210ENST00000597641 SOGA3Q5TF21 947 aa20.12■□□□□ 0.81
PRKD2-210ENST00000597641 RRP7AQ9Y3A4 280 aaKnown RBP20.12■□□□□ 0.81
PRKD2-210ENST00000597641 LTBP1Q14766 1721 aa20.11■□□□□ 0.81
PRKD2-210ENST00000597641 MAP3K15Q6ZN16 1313 aa20.11■□□□□ 0.81
PRKD2-210ENST00000597641 NFE2L2Q16236 605 aa20.11■□□□□ 0.81
PRKD2-210ENST00000597641 L3MBTL3Q96JM7 780 aaPredicted RBP20.11■□□□□ 0.81
PRKD2-210ENST00000597641 TAF1DQ9H5J8 278 aaPredicted RBP20.11■□□□□ 0.81
PRKD2-210ENST00000597641 TAF1P21675 1872 aa20.1■□□□□ 0.81
PRKD2-210ENST00000597641 MYL6BP14649 208 aa20.1■□□□□ 0.81
PRKD2-210ENST00000597641 GPTP24298 496 aa20.1■□□□□ 0.81
PRKD2-210ENST00000597641 CRY2Q49AN0 593 aa20.1■□□□□ 0.81
PRKD2-210ENST00000597641 C3orf67Q6ZVT6 689 aa20.1■□□□□ 0.81
PRKD2-210ENST00000597641 MKRN1Q9UHC7 482 aaKnown RBP20.1■□□□□ 0.81
PRKD2-210ENST00000597641 LAMB2P55268 1798 aa20.1■□□□□ 0.81
PRKD2-210ENST00000597641 PASKQ96RG2 1323 aa20.09■□□□□ 0.81
PRKD2-210ENST00000597641 SUSD4Q5VX71 490 aa20.09■□□□□ 0.81
PRKD2-210ENST00000597641 LRP10Q7Z4F1 713 aa20.09■□□□□ 0.81
PRKD2-210ENST00000597641 SYNE4Q8N205 404 aa20.09■□□□□ 0.81
PRKD2-210ENST00000597641 ZBTB3Q9H5J0 574 aa20.09■□□□□ 0.81
PRKD2-210ENST00000597641 ERVV-1B6SEH8 477 aa20.08■□□□□ 0.81
PRKD2-210ENST00000597641 FZD9O00144 591 aa20.07■□□□□ 0.8
PRKD2-210ENST00000597641 ITGBL1O95965 494 aaPredicted RBP20.07■□□□□ 0.8
PRKD2-210ENST00000597641 IARSP41252 1262 aaKnown RBP20.07■□□□□ 0.8
PRKD2-210ENST00000597641 CREBZFQ9NS37 354 aa20.07■□□□□ 0.8
PRKD2-210ENST00000597641 ANKRD36CQ5JPF3 1778 aa20.06■□□□□ 0.8
PRKD2-210ENST00000597641 CAPN15O75808 1086 aa20.06■□□□□ 0.8
PRKD2-210ENST00000597641 ANXA1P04083 346 aa20.06■□□□□ 0.8
PRKD2-210ENST00000597641 GTF2E1P29083 439 aaPredicted RBP20.06■□□□□ 0.8
PRKD2-210ENST00000597641 PDIA6Q15084 440 aa20.06■□□□□ 0.8
PRKD2-210ENST00000597641 PROSER3Q2NL68 480 aa20.06■□□□□ 0.8
PRKD2-210ENST00000597641 LDHDQ86WU2 507 aa20.06■□□□□ 0.8
PRKD2-210ENST00000597641 ZNF34Q8IZ26 560 aa20.06■□□□□ 0.8
PRKD2-210ENST00000597641 RTKN2Q8IZC4 609 aa20.06■□□□□ 0.8
PRKD2-210ENST00000597641 PNISRQ8TF01 805 aaKnown RBP20.06■□□□□ 0.8
PRKD2-210ENST00000597641 RNF123Q5XPI4 1314 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms