RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 KCNA3P22001 575 aa27.45■■□□□ 1.98
PNKP-209ENST00000596726 NGEFQ8N5V2 710 aa27.45■■□□□ 1.98
PNKP-209ENST00000596726 SETDB2Q96T68 719 aa27.45■■□□□ 1.98
PNKP-209ENST00000596726 ERVV-1B6SEH8 477 aa27.44■■□□□ 1.98
PNKP-209ENST00000596726 TTLL7Q6ZT98 887 aa27.44■■□□□ 1.98
PNKP-209ENST00000596726 FAM9BQ8IZU0 186 aa27.44■■□□□ 1.98
PNKP-209ENST00000596726 HLFQ16534 295 aa27.43■■□□□ 1.98
PNKP-209ENST00000596726 MAP3K15Q6ZN16 1313 aa27.42■■□□□ 1.98
PNKP-209ENST00000596726 ANKRD31Q8N7Z5 1873 aa27.42■■□□□ 1.98
PNKP-209ENST00000596726 PROSER3Q2NL68 480 aa27.42■■□□□ 1.98
PNKP-209ENST00000596726 DUSP27Q5VZP5 1158 aa27.41■■□□□ 1.98
PNKP-209ENST00000596726 WWC3Q9ULE0 1092 aa27.41■■□□□ 1.98
PNKP-209ENST00000596726 ANXA1P04083 346 aa27.4■■□□□ 1.98
PNKP-209ENST00000596726 YY1P25490 414 aa27.4■■□□□ 1.98
PNKP-209ENST00000596726 PRR5LQ6MZQ0 368 aa27.4■■□□□ 1.98
PNKP-209ENST00000596726 NECTIN2Q92692 538 aa27.4■■□□□ 1.98
PNKP-209ENST00000596726 DDX21Q9NR30 783 aaKnown RBP eCLIP27.4■■□□□ 1.98
PNKP-209ENST00000596726 KIF6Q6ZMV9 814 aa27.39■■□□□ 1.98
PNKP-209ENST00000596726 DLEC1Q9Y238 1755 aa27.39■■□□□ 1.98
PNKP-209ENST00000596726 IL16Q14005 1332 aa27.39■■□□□ 1.97
PNKP-209ENST00000596726 CHRNA5P30532 468 aa27.38■■□□□ 1.97
PNKP-209ENST00000596726 HDGFL1Q5TGJ6 251 aa27.38■■□□□ 1.97
PNKP-209ENST00000596726 NIP7Q9Y221 180 aaKnown RBP eCLIP27.38■■□□□ 1.97
PNKP-209ENST00000596726 ARFGEF1Q9Y6D6 1849 aa27.38■■□□□ 1.97
PNKP-209ENST00000596726 PIM2Q9P1W9 311 aa27.37■■□□□ 1.97
PNKP-209ENST00000596726 ATP10DQ9P241 1426 aa27.36■■□□□ 1.97
PNKP-209ENST00000596726 CNBD1Q8NA66 436 aa27.36■■□□□ 1.97
PNKP-209ENST00000596726 BRIP1Q9BX63 1249 aa27.36■■□□□ 1.97
PNKP-209ENST00000596726 ZBTB3Q9H5J0 574 aa27.36■■□□□ 1.97
PNKP-209ENST00000596726 CHPF2Q9P2E5 772 aa27.36■■□□□ 1.97
PNKP-209ENST00000596726 WDR63Q8IWG1 891 aa27.35■■□□□ 1.97
PNKP-209ENST00000596726 C8orf58Q8NAV2 365 aa27.35■■□□□ 1.97
PNKP-209ENST00000596726 BCS1LQ9Y276 419 aa27.35■■□□□ 1.97
PNKP-209ENST00000596726 GIGYF2Q6Y7W6 1299 aaKnown RBP27.34■■□□□ 1.97
PNKP-209ENST00000596726 COPS6Q7L5N1 327 aa27.34■■□□□ 1.97
PNKP-209ENST00000596726 NBPF5PQ86XG9 351 aaPredicted RBP27.34■■□□□ 1.97
PNKP-209ENST00000596726 CCDC24Q8N4L8 307 aa27.34■■□□□ 1.97
PNKP-209ENST00000596726 DBF4Q9UBU7 674 aaPredicted RBP27.34■■□□□ 1.97
PNKP-209ENST00000596726 SALL2Q9Y467 1007 aaPredicted RBP27.34■■□□□ 1.97
PNKP-209ENST00000596726 CCER2I3L3R5 266 aa27.33■■□□□ 1.97
PNKP-209ENST00000596726 XAGE3Q8WTP9 111 aa27.33■■□□□ 1.97
PNKP-209ENST00000596726 TSR2Q969E8 191 aaKnown RBP27.33■■□□□ 1.97
PNKP-209ENST00000596726 PDZRN3Q9UPQ7 1066 aa27.33■■□□□ 1.97
PNKP-209ENST00000596726 ELL2O00472 640 aaPredicted RBP27.32■■□□□ 1.96
PNKP-209ENST00000596726 C2CD5Q86YS7 1000 aa27.32■■□□□ 1.96
PNKP-209ENST00000596726 ZNF34Q8IZ26 560 aa27.32■■□□□ 1.96
PNKP-209ENST00000596726 COL11A2P13942 1736 aaPredicted RBP27.31■■□□□ 1.96
PNKP-209ENST00000596726 H0YIN7 160 aa27.31■■□□□ 1.96
PNKP-209ENST00000596726 PDE6BP35913 854 aa27.31■■□□□ 1.96
PNKP-209ENST00000596726 ST5P78524 1137 aa27.31■■□□□ 1.96
PNKP-209ENST00000596726 DALRD3Q5D0E6 543 aaKnown RBP27.31■■□□□ 1.96
PNKP-209ENST00000596726 TPTE2Q6XPS3 522 aa27.31■■□□□ 1.96
PNKP-209ENST00000596726 TSPYL6Q8N831 410 aa27.3■■□□□ 1.96
PNKP-209ENST00000596726 ANKRD36CQ5JPF3 1778 aa27.3■■□□□ 1.96
PNKP-209ENST00000596726 NPHP1O15259 732 aa27.29■■□□□ 1.96
PNKP-209ENST00000596726 AIMP1Q12904 312 aaKnown RBP27.29■■□□□ 1.96
PNKP-209ENST00000596726 HYPKQ9NX55 129 aa27.29■■□□□ 1.96
PNKP-209ENST00000596726 UBN2Q6ZU65 1347 aa27.29■■□□□ 1.96
PNKP-209ENST00000596726 IBTKQ9P2D0 1353 aaPredicted RBP27.27■■□□□ 1.96
PNKP-209ENST00000596726 FAM177BA6PVY3 158 aa27.27■■□□□ 1.96
PNKP-209ENST00000596726 GPTP24298 496 aa27.27■■□□□ 1.96
PNKP-209ENST00000596726 KLRG2A4D1S0 409 aaPredicted RBP27.26■■□□□ 1.95
PNKP-209ENST00000596726 CHMP4AQ9BY43 222 aa27.26■■□□□ 1.95
PNKP-209ENST00000596726 NYXQ9GZU5 481 aa27.26■■□□□ 1.95
PNKP-209ENST00000596726 FANCIQ9NVI1 1328 aa27.25■■□□□ 1.95
PNKP-209ENST00000596726 SUSD4Q5VX71 490 aa27.25■■□□□ 1.95
PNKP-209ENST00000596726 TTLL6Q8N841 843 aa27.25■■□□□ 1.95
PNKP-209ENST00000596726 ZNF521Q96K83 1311 aa27.24■■□□□ 1.95
PNKP-209ENST00000596726 HSP90AB3PQ58FF7 597 aa27.24■■□□□ 1.95
PNKP-209ENST00000596726 CCDC30Q5VVM6 783 aa27.24■■□□□ 1.95
PNKP-209ENST00000596726 PLBD2Q8NHP8 589 aa27.24■■□□□ 1.95
PNKP-209ENST00000596726 SPINK5Q9NQ38 1064 aaPredicted RBP27.24■■□□□ 1.95
PNKP-209ENST00000596726 SRGNP10124 158 aa27.23■■□□□ 1.95
PNKP-209ENST00000596726 TCIRG1Q13488 830 aa27.23■■□□□ 1.95
PNKP-209ENST00000596726 PARP10Q53GL7 1025 aa27.23■■□□□ 1.95
PNKP-209ENST00000596726 DIEXFQ68CQ4 756 aaKnown RBP27.23■■□□□ 1.95
PNKP-209ENST00000596726 ANKRD13DQ6ZTN6 518 aa27.23■■□□□ 1.95
PNKP-209ENST00000596726 NTSR2O95665 410 aa27.22■■□□□ 1.95
PNKP-209ENST00000596726 TWISTNBQ3B726 338 aaPredicted RBP27.22■■□□□ 1.95
PNKP-209ENST00000596726 ARHGAP27Q6ZUM4 889 aa27.22■■□□□ 1.95
PNKP-209ENST00000596726 ZNF622Q969S3 477 aaKnown RBP eCLIP27.22■■□□□ 1.95
PNKP-209ENST00000596726 ARFGEF2Q9Y6D5 1785 aa27.22■■□□□ 1.95
PNKP-209ENST00000596726 GTF2E1P29083 439 aaPredicted RBP27.21■■□□□ 1.95
PNKP-209ENST00000596726 ERFEQ4G0M1 354 aa27.21■■□□□ 1.95
PNKP-209ENST00000596726 STYK1Q6J9G0 422 aa27.21■■□□□ 1.95
PNKP-209ENST00000596726 PPP1R42Q7Z4L9 355 aa27.21■■□□□ 1.95
PNKP-209ENST00000596726 NUTM1Q86Y26 1132 aa27.21■■□□□ 1.95
PNKP-209ENST00000596726 MASTLQ96GX5 879 aa27.21■■□□□ 1.95
PNKP-209ENST00000596726 PHAXQ9H814 394 aaKnown RBP27.21■■□□□ 1.95
PNKP-209ENST00000596726 RIC1Q4ADV7 1423 aa27.21■■□□□ 1.95
PNKP-209ENST00000596726 ABCC12Q96J65 1359 aa27.21■■□□□ 1.95
PNKP-209ENST00000596726 TNRC6CQ9HCJ0 1690 aaKnown RBP27.21■■□□□ 1.95
PNKP-209ENST00000596726 CACNA1SQ13698 1873 aa27.19■■□□□ 1.94
PNKP-209ENST00000596726 SLX4Q8IY92 1834 aa27.19■■□□□ 1.94
PNKP-209ENST00000596726 ZNF784Q8NCA9 323 aaPredicted RBP27.19■■□□□ 1.94
PNKP-209ENST00000596726 CACNA1FO60840 1977 aa27.18■■□□□ 1.94
PNKP-209ENST00000596726 GOLGA2Q08379 1002 aa27.18■■□□□ 1.94
PNKP-209ENST00000596726 NLRP10Q86W26 655 aa27.18■■□□□ 1.94
PNKP-209ENST00000596726 CNKSR1Q969H4 720 aa27.18■■□□□ 1.94
PNKP-209ENST00000596726 SBF1O95248 1867 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms