RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 ERVV-1B6SEH8 477 aa20.58■□□□□ 0.89
ZNF550-207ENST00000595560 ZNF853P0CG23 659 aa20.58■□□□□ 0.89
ZNF550-207ENST00000595560 PDIA6Q15084 440 aa20.58■□□□□ 0.89
ZNF550-207ENST00000595560 CNBD1Q8NA66 436 aa20.58■□□□□ 0.89
ZNF550-207ENST00000595560 IFT57Q9NWB7 429 aa20.58■□□□□ 0.89
ZNF550-207ENST00000595560 HOXB7P09629 217 aa20.57■□□□□ 0.88
ZNF550-207ENST00000595560 EIF2S2P20042 333 aaKnown RBP20.57■□□□□ 0.88
ZNF550-207ENST00000595560 HLFQ16534 295 aa20.57■□□□□ 0.88
ZNF550-207ENST00000595560 KRT24Q2M2I5 525 aa20.57■□□□□ 0.88
ZNF550-207ENST00000595560 DALRD3Q5D0E6 543 aaKnown RBP20.57■□□□□ 0.88
ZNF550-207ENST00000595560 KIF6Q6ZMV9 814 aa20.57■□□□□ 0.88
ZNF550-207ENST00000595560 LRP10Q7Z4F1 713 aa20.57■□□□□ 0.88
ZNF550-207ENST00000595560 NGEFQ8N5V2 710 aa20.57■□□□□ 0.88
ZNF550-207ENST00000595560 ZNF784Q8NCA9 323 aaPredicted RBP20.57■□□□□ 0.88
ZNF550-207ENST00000595560 BRIP1Q9BX63 1249 aa20.57■□□□□ 0.88
ZNF550-207ENST00000595560 MBIPQ9NS73 344 aa20.57■□□□□ 0.88
ZNF550-207ENST00000595560 ATP10DQ9P241 1426 aa20.57■□□□□ 0.88
ZNF550-207ENST00000595560 GNAI1P63096 354 aa20.56■□□□□ 0.88
ZNF550-207ENST00000595560 TTLL7Q6ZT98 887 aa20.56■□□□□ 0.88
ZNF550-207ENST00000595560 PDZRN3Q9UPQ7 1066 aa20.56■□□□□ 0.88
ZNF550-207ENST00000595560 NIP7Q9Y221 180 aaKnown RBP eCLIP20.56■□□□□ 0.88
ZNF550-207ENST00000595560 PDE6BP35913 854 aa20.55■□□□□ 0.88
ZNF550-207ENST00000595560 ST5P78524 1137 aa20.55■□□□□ 0.88
ZNF550-207ENST00000595560 CCDC27Q2M243 656 aa20.55■□□□□ 0.88
ZNF550-207ENST00000595560 NBPF5PQ86XG9 351 aaPredicted RBP20.55■□□□□ 0.88
ZNF550-207ENST00000595560 C2CD5Q86YS7 1000 aa20.55■□□□□ 0.88
ZNF550-207ENST00000595560 H0YIN7 160 aa20.54■□□□□ 0.88
ZNF550-207ENST00000595560 NPHP1O15259 732 aa20.54■□□□□ 0.88
ZNF550-207ENST00000595560 PROSER3Q2NL68 480 aa20.54■□□□□ 0.88
ZNF550-207ENST00000595560 NCBP3Q53F19 620 aaKnown RBP20.54■□□□□ 0.88
ZNF550-207ENST00000595560 ADCY9O60503 1353 aa20.54■□□□□ 0.88
ZNF550-207ENST00000595560 ANKRD36CQ5JPF3 1778 aa20.54■□□□□ 0.88
ZNF550-207ENST00000595560 ZBTB3Q9H5J0 574 aa20.53■□□□□ 0.88
ZNF550-207ENST00000595560 DDX21Q9NR30 783 aaKnown RBP eCLIP20.53■□□□□ 0.88
ZNF550-207ENST00000595560 ARFGEF2Q9Y6D5 1785 aa20.53■□□□□ 0.88
ZNF550-207ENST00000595560 HDGFL1Q5TGJ6 251 aa20.52■□□□□ 0.88
ZNF550-207ENST00000595560 CCDC24Q8N4L8 307 aa20.52■□□□□ 0.88
ZNF550-207ENST00000595560 NECTIN2Q92692 538 aa20.52■□□□□ 0.88
ZNF550-207ENST00000595560 IBTKQ9P2D0 1353 aaPredicted RBP20.51■□□□□ 0.87
ZNF550-207ENST00000595560 ANXA1P04083 346 aa20.51■□□□□ 0.87
ZNF550-207ENST00000595560 DUSP27Q5VZP5 1158 aa20.51■□□□□ 0.87
ZNF550-207ENST00000595560 TPTE2Q6XPS3 522 aa20.51■□□□□ 0.87
ZNF550-207ENST00000595560 GIGYF2Q6Y7W6 1299 aaKnown RBP20.51■□□□□ 0.87
ZNF550-207ENST00000595560 WWC1Q8IX03 1113 aa20.51■□□□□ 0.87
ZNF550-207ENST00000595560 TTLL6Q8N841 843 aa20.51■□□□□ 0.87
ZNF550-207ENST00000595560 CACNA1SQ13698 1873 aa20.51■□□□□ 0.87
ZNF550-207ENST00000595560 ARHGAP27Q6ZUM4 889 aa20.5■□□□□ 0.87
ZNF550-207ENST00000595560 CHPF2Q9P2E5 772 aa20.5■□□□□ 0.87
ZNF550-207ENST00000595560 SBF1O95248 1867 aa20.5■□□□□ 0.87
ZNF550-207ENST00000595560 UBN2Q6ZU65 1347 aa20.49■□□□□ 0.87
ZNF550-207ENST00000595560 TNRC6CQ9HCJ0 1690 aaKnown RBP20.48■□□□□ 0.87
ZNF550-207ENST00000595560 COPS6Q7L5N1 327 aa20.48■□□□□ 0.87
ZNF550-207ENST00000595560 ZNF34Q8IZ26 560 aa20.48■□□□□ 0.87
ZNF550-207ENST00000595560 XAGE3Q8WTP9 111 aa20.48■□□□□ 0.87
ZNF550-207ENST00000595560 NYXQ9GZU5 481 aa20.48■□□□□ 0.87
ZNF550-207ENST00000595560 DBF4Q9UBU7 674 aaPredicted RBP20.48■□□□□ 0.87
ZNF550-207ENST00000595560 RIC1Q4ADV7 1423 aa20.47■□□□□ 0.87
ZNF550-207ENST00000595560 SRGNP10124 158 aa20.47■□□□□ 0.87
ZNF550-207ENST00000595560 STYK1Q6J9G0 422 aa20.47■□□□□ 0.87
ZNF550-207ENST00000595560 IL16Q14005 1332 aa20.47■□□□□ 0.87
ZNF550-207ENST00000595560 SLX4Q8IY92 1834 aa20.46■□□□□ 0.87
ZNF550-207ENST00000595560 SENP3-EIF4A1A0A087X0R7 540 aa20.46■□□□□ 0.87
ZNF550-207ENST00000595560 KLRG2A4D1S0 409 aaPredicted RBP20.46■□□□□ 0.87
ZNF550-207ENST00000595560 FAM177BA6PVY3 158 aa20.46■□□□□ 0.87
ZNF550-207ENST00000595560 GPTP24298 496 aa20.46■□□□□ 0.87
ZNF550-207ENST00000595560 ZNF622Q969S3 477 aaKnown RBP eCLIP20.46■□□□□ 0.87
ZNF550-207ENST00000595560 GTF2E1P29083 439 aaPredicted RBP20.45■□□□□ 0.86
ZNF550-207ENST00000595560 AIMP1Q12904 312 aaKnown RBP20.45■□□□□ 0.86
ZNF550-207ENST00000595560 PARP10Q53GL7 1025 aa20.45■□□□□ 0.86
ZNF550-207ENST00000595560 FAM9BQ8IZU0 186 aa20.45■□□□□ 0.86
ZNF550-207ENST00000595560 MASTLQ96GX5 879 aa20.45■□□□□ 0.86
ZNF550-207ENST00000595560 HYPKQ9NX55 129 aa20.45■□□□□ 0.86
ZNF550-207ENST00000595560 FER1L6Q2WGJ9 1857 aa20.45■□□□□ 0.86
ZNF550-207ENST00000595560 ABCC12Q96J65 1359 aa20.45■□□□□ 0.86
ZNF550-207ENST00000595560 HSP90AB3PQ58FF7 597 aa20.44■□□□□ 0.86
ZNF550-207ENST00000595560 C8orf58Q8NAV2 365 aa20.44■□□□□ 0.86
ZNF550-207ENST00000595560 CNKSR1Q969H4 720 aa20.44■□□□□ 0.86
ZNF550-207ENST00000595560 NTSR2O95665 410 aa20.43■□□□□ 0.86
ZNF550-207ENST00000595560 NPR1P16066 1061 aa20.43■□□□□ 0.86
ZNF550-207ENST00000595560 SUSD4Q5VX71 490 aa20.43■□□□□ 0.86
ZNF550-207ENST00000595560 PPP1R42Q7Z4L9 355 aa20.43■□□□□ 0.86
ZNF550-207ENST00000595560 NUTM1Q86Y26 1132 aa20.43■□□□□ 0.86
ZNF550-207ENST00000595560 TSR2Q969E8 191 aaKnown RBP20.43■□□□□ 0.86
ZNF550-207ENST00000595560 CHMP4AQ9BY43 222 aa20.43■□□□□ 0.86
ZNF550-207ENST00000595560 CCDC88AQ3V6T2 1871 aa20.43■□□□□ 0.86
ZNF550-207ENST00000595560 ELL2O00472 640 aaPredicted RBP20.42■□□□□ 0.86
ZNF550-207ENST00000595560 WDR63Q8IWG1 891 aa20.42■□□□□ 0.86
ZNF550-207ENST00000595560 PLBD2Q8NHP8 589 aa20.42■□□□□ 0.86
ZNF550-207ENST00000595560 CRY2Q49AN0 593 aa20.41■□□□□ 0.86
ZNF550-207ENST00000595560 ERFEQ4G0M1 354 aa20.41■□□□□ 0.86
ZNF550-207ENST00000595560 C9orf131Q5VYM1 1079 aa20.41■□□□□ 0.86
ZNF550-207ENST00000595560 PRPF40BQ6NWY9 871 aaKnown RBP20.41■□□□□ 0.86
ZNF550-207ENST00000595560 RNF123Q5XPI4 1314 aa20.41■□□□□ 0.86
ZNF550-207ENST00000595560 TCIRG1Q13488 830 aa20.4■□□□□ 0.86
ZNF550-207ENST00000595560 TSPYL6Q8N831 410 aa20.4■□□□□ 0.86
ZNF550-207ENST00000595560 TIAM2Q8IVF5 1701 aa20.39■□□□□ 0.86
ZNF550-207ENST00000595560 C21orf2O43822 256 aa20.39■□□□□ 0.85
ZNF550-207ENST00000595560 RASSF7Q02833 373 aa20.39■□□□□ 0.85
ZNF550-207ENST00000595560 CCDC30Q5VVM6 783 aa20.39■□□□□ 0.85
ZNF550-207ENST00000595560 ANKRD13DQ6ZTN6 518 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms