RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 HYPKQ9NX55 129 aa15.88■□□□□ 0.13
VRK3-209ENST00000594948 HDAC5Q9UQL6 1122 aa15.88■□□□□ 0.13
VRK3-209ENST00000594948 EID1Q9Y6B2 187 aa15.88■□□□□ 0.13
VRK3-209ENST00000594948 KDM4AO75164 1064 aa15.87■□□□□ 0.13
VRK3-209ENST00000594948 GTF2F1P35269 517 aaKnown RBP eCLIP15.87■□□□□ 0.13
VRK3-209ENST00000594948 NECTIN2Q92692 538 aa15.87■□□□□ 0.13
VRK3-209ENST00000594948 PKNOX2Q96KN3 472 aa15.87■□□□□ 0.13
VRK3-209ENST00000594948 FAM13BQ9NYF5 915 aa15.87■□□□□ 0.13
VRK3-209ENST00000594948 ADCY5O95622 1261 aa15.87■□□□□ 0.13
VRK3-209ENST00000594948 NLRP6P59044 892 aa15.87■□□□□ 0.13
VRK3-209ENST00000594948 ERC1Q8IUD2 1116 aa15.87■□□□□ 0.13
VRK3-209ENST00000594948 ZSWIM6Q9HCJ5 1215 aa15.87■□□□□ 0.13
VRK3-209ENST00000594948 USP25Q9UHP3 1055 aa15.87■□□□□ 0.13
VRK3-209ENST00000594948 OVOS2A0A0G2JMS6 1433 aa15.86■□□□□ 0.13
VRK3-209ENST00000594948 EIF4A1P60842 406 aaKnown RBP15.86■□□□□ 0.13
VRK3-209ENST00000594948 NOLC1Q14978 699 aaKnown RBP eCLIP15.86■□□□□ 0.13
VRK3-209ENST00000594948 GPATCH3Q96I76 525 aa15.86■□□□□ 0.13
VRK3-209ENST00000594948 DIAPH3Q9NSV4 1193 aa15.86■□□□□ 0.13
VRK3-209ENST00000594948 MTMR6Q9Y217 621 aa15.86■□□□□ 0.13
VRK3-209ENST00000594948 CCDC171Q6TFL3 1326 aa15.85■□□□□ 0.13
VRK3-209ENST00000594948 SNRKQ9NRH2 765 aa15.85■□□□□ 0.13
VRK3-209ENST00000594948 SIPA1L3O60292 1781 aaPredicted RBP15.85■□□□□ 0.13
VRK3-209ENST00000594948 NCAPD2Q15021 1401 aa15.85■□□□□ 0.13
VRK3-209ENST00000594948 HIP1O00291 1037 aa15.84■□□□□ 0.13
VRK3-209ENST00000594948 ALDH1L1O75891 902 aa15.84■□□□□ 0.13
VRK3-209ENST00000594948 MAP4K4O95819 1239 aaPredicted RBP15.84■□□□□ 0.13
VRK3-209ENST00000594948 HCLS1P14317 486 aaPredicted RBP15.84■□□□□ 0.13
VRK3-209ENST00000594948 CASTP20810 708 aaKnown RBP15.84■□□□□ 0.13
VRK3-209ENST00000594948 CLASRPQ8N2M8 674 aaKnown RBP15.84■□□□□ 0.13
VRK3-209ENST00000594948 ECHDC1Q9NTX5 307 aa15.84■□□□□ 0.13
VRK3-209ENST00000594948 PDRG1Q9NUG6 133 aa15.84■□□□□ 0.13
VRK3-209ENST00000594948 NFAT5O94916 1531 aa15.84■□□□□ 0.13
VRK3-209ENST00000594948 NBPF7P0C2Y1 421 aaPredicted RBP15.84■□□□□ 0.13
VRK3-209ENST00000594948 GJB2P29033 226 aa15.84■□□□□ 0.13
VRK3-209ENST00000594948 FOXD4L6Q3SYB3 417 aaPredicted RBP15.84■□□□□ 0.13
VRK3-209ENST00000594948 CWC27Q6UX04 472 aaKnown RBP15.84■□□□□ 0.13
VRK3-209ENST00000594948 FOXD4L3Q6VB84 417 aaPredicted RBP15.84■□□□□ 0.13
VRK3-209ENST00000594948 CYP46A1Q9Y6A2 500 aa15.84■□□□□ 0.13
VRK3-209ENST00000594948 RGPD2P0DJD1 1756 aa15.83■□□□□ 0.13
VRK3-209ENST00000594948 ADCY9O60503 1353 aa15.83■□□□□ 0.13
VRK3-209ENST00000594948 ELP1O95163 1332 aa15.83■□□□□ 0.12
VRK3-209ENST00000594948 EVI5LQ96CN4 794 aa15.83■□□□□ 0.12
VRK3-209ENST00000594948 ALDH8A1Q9H2A2 487 aaPredicted RBP15.83■□□□□ 0.12
VRK3-209ENST00000594948 LMTK3Q96Q04 1460 aa15.83■□□□□ 0.12
VRK3-209ENST00000594948 NECTIN1Q15223 517 aa15.82■□□□□ 0.12
VRK3-209ENST00000594948 SLC26A8Q96RN1 970 aa15.82■□□□□ 0.12
VRK3-209ENST00000594948 PI4KAP2A4QPH2 592 aa15.82■□□□□ 0.12
VRK3-209ENST00000594948 FIBPO43427 364 aa15.82■□□□□ 0.12
VRK3-209ENST00000594948 LARGE1O95461 756 aa15.82■□□□□ 0.12
VRK3-209ENST00000594948 DNTTIP2Q5QJE6 756 aaKnown RBP15.82■□□□□ 0.12
VRK3-209ENST00000594948 PI4KAP1Q8N8J0 262 aa15.82■□□□□ 0.12
VRK3-209ENST00000594948 JAKMIP1Q96N16 626 aaKnown RBP15.82■□□□□ 0.12
VRK3-209ENST00000594948 CHPF2Q9P2E5 772 aa15.82■□□□□ 0.12
VRK3-209ENST00000594948 SPG7Q9UQ90 795 aa15.82■□□□□ 0.12
VRK3-209ENST00000594948 ADAMTS7Q9UKP4 1686 aa15.81■□□□□ 0.12
VRK3-209ENST00000594948 ZKSCAN1P17029 563 aaPredicted RBP15.81■□□□□ 0.12
VRK3-209ENST00000594948 CCDC83Q8IWF9 413 aa15.81■□□□□ 0.12
VRK3-209ENST00000594948 CAMTA1Q9Y6Y1 1673 aa15.8■□□□□ 0.12
VRK3-209ENST00000594948 GOLGA6L6A8MZA4 724 aa15.8■□□□□ 0.12
VRK3-209ENST00000594948 CCDC192P0DO97 292 aa15.8■□□□□ 0.12
VRK3-209ENST00000594948 PDCP20941 246 aa15.8■□□□□ 0.12
VRK3-209ENST00000594948 PTH1RQ03431 593 aa15.8■□□□□ 0.12
VRK3-209ENST00000594948 OS9Q13438 667 aaPredicted RBP15.8■□□□□ 0.12
VRK3-209ENST00000594948 SMAP1Q8IYB5 467 aaPredicted RBP15.8■□□□□ 0.12
VRK3-209ENST00000594948 IP6K1Q92551 441 aa15.8■□□□□ 0.12
VRK3-209ENST00000594948 MYH15Q9Y2K3 1946 aa15.8■□□□□ 0.12
VRK3-209ENST00000594948 MRC1P22897 1456 aa15.8■□□□□ 0.12
VRK3-209ENST00000594948 PSMA5P28066 241 aa15.8■□□□□ 0.12
VRK3-209ENST00000594948 DNM1Q05193 864 aaKnown RBP15.8■□□□□ 0.12
VRK3-209ENST00000594948 ANKRD1Q15327 319 aa15.8■□□□□ 0.12
VRK3-209ENST00000594948 DBF4Q9UBU7 674 aaPredicted RBP15.8■□□□□ 0.12
VRK3-209ENST00000594948 KRT85P78386 507 aa15.79■□□□□ 0.12
VRK3-209ENST00000594948 ST3GAL1Q11201 340 aa15.79■□□□□ 0.12
VRK3-209ENST00000594948 PRPF40BQ6NWY9 871 aaKnown RBP15.79■□□□□ 0.12
VRK3-209ENST00000594948 KIAA1524Q8TCG1 905 aa15.79■□□□□ 0.12
VRK3-209ENST00000594948 MAP4K1Q92918 833 aa15.79■□□□□ 0.12
VRK3-209ENST00000594948 CCDC94Q9BW85 323 aaPredicted RBP15.79■□□□□ 0.12
VRK3-209ENST00000594948 JCADQ9P266 1359 aa15.79■□□□□ 0.12
VRK3-209ENST00000594948 UTYO14607 1347 aa15.78■□□□□ 0.12
VRK3-209ENST00000594948 IFIT2P09913 472 aaKnown RBP15.78■□□□□ 0.12
VRK3-209ENST00000594948 EIF2S2P20042 333 aaKnown RBP15.78■□□□□ 0.12
VRK3-209ENST00000594948 ME3Q16798 604 aa15.78■□□□□ 0.12
VRK3-209ENST00000594948 ADCK5Q3MIX3 580 aa15.78■□□□□ 0.12
VRK3-209ENST00000594948 AKAP4Q5JQC9 854 aa15.78■□□□□ 0.12
VRK3-209ENST00000594948 GIMAP6Q6P9H5 292 aa15.78■□□□□ 0.12
VRK3-209ENST00000594948 ABTB2Q8N961 1025 aa15.78■□□□□ 0.12
VRK3-209ENST00000594948 TTC12Q9H892 705 aaPredicted RBP15.78■□□□□ 0.12
VRK3-209ENST00000594948 HEG1Q9ULI3 1381 aa15.78■□□□□ 0.12
VRK3-209ENST00000594948 CREB3L3Q68CJ9 461 aa15.78■□□□□ 0.12
VRK3-209ENST00000594948 RBM8AQ9Y5S9 174 aaKnown RBP15.78■□□□□ 0.12
VRK3-209ENST00000594948 CPA1P15085 419 aa15.77■□□□□ 0.11
VRK3-209ENST00000594948 KSR2Q6VAB6 950 aa15.77■□□□□ 0.11
VRK3-209ENST00000594948 FAM200AQ8TCP9 573 aa15.77■□□□□ 0.11
VRK3-209ENST00000594948 ZNF830Q96NB3 372 aaPredicted RBP15.77■□□□□ 0.11
VRK3-209ENST00000594948 FER1L4A9Z1Z3 1794 aa15.76■□□□□ 0.11
VRK3-209ENST00000594948 TEFQ10587 303 aa15.76■□□□□ 0.11
VRK3-209ENST00000594948 TSGA10IPQ3SY00 556 aa15.76■□□□□ 0.11
VRK3-209ENST00000594948 RNF20Q5VTR2 975 aa15.76■□□□□ 0.11
VRK3-209ENST00000594948 LTV1Q96GA3 475 aaPredicted RBP15.76■□□□□ 0.11
VRK3-209ENST00000594948 MED23Q9ULK4 1368 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms