RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 NEUROD2Q15784 382 aa30.84■■■□□ 2.53
LSM4-204ENST00000594828 NBPF5PQ86XG9 351 aaPredicted RBP30.84■■■□□ 2.53
LSM4-204ENST00000594828 NGEFQ8N5V2 710 aa30.84■■■□□ 2.53
LSM4-204ENST00000594828 DLEC1Q9Y238 1755 aa30.84■■■□□ 2.53
LSM4-204ENST00000594828 ZEB1P37275 1124 aaPredicted RBP30.83■■■□□ 2.53
LSM4-204ENST00000594828 BABAM1Q9NWV8 329 aa30.83■■■□□ 2.53
LSM4-204ENST00000594828 ADAMTS8Q9UP79 889 aa30.83■■■□□ 2.53
LSM4-204ENST00000594828 NIP7Q9Y221 180 aaKnown RBP eCLIP30.83■■■□□ 2.53
LSM4-204ENST00000594828 RNF181Q9P0P0 153 aa30.82■■■□□ 2.52
LSM4-204ENST00000594828 ANKRD31Q8N7Z5 1873 aa30.82■■■□□ 2.52
LSM4-204ENST00000594828 HLFQ16534 295 aa30.81■■■□□ 2.52
LSM4-204ENST00000594828 MYL6BP14649 208 aa30.8■■■□□ 2.52
LSM4-204ENST00000594828 TPTE2Q6XPS3 522 aa30.8■■■□□ 2.52
LSM4-204ENST00000594828 ERVV-1B6SEH8 477 aa30.78■■■□□ 2.52
LSM4-204ENST00000594828 KIF3CO14782 793 aa30.78■■■□□ 2.52
LSM4-204ENST00000594828 RASSF7Q02833 373 aa30.77■■■□□ 2.52
LSM4-204ENST00000594828 SRGNP10124 158 aa30.76■■■□□ 2.51
LSM4-204ENST00000594828 KIF6Q6ZMV9 814 aa30.76■■■□□ 2.51
LSM4-204ENST00000594828 TTLL7Q6ZT98 887 aa30.76■■■□□ 2.51
LSM4-204ENST00000594828 CNKSR1Q969H4 720 aa30.76■■■□□ 2.51
LSM4-204ENST00000594828 TRIM35Q9UPQ4 493 aa30.76■■■□□ 2.51
LSM4-204ENST00000594828 ERBB4Q15303 1308 aa30.75■■■□□ 2.51
LSM4-204ENST00000594828 MAP3K15Q6ZN16 1313 aa30.75■■■□□ 2.51
LSM4-204ENST00000594828 FAM177BA6PVY3 158 aa30.75■■■□□ 2.51
LSM4-204ENST00000594828 EIF2S2P20042 333 aaKnown RBP30.75■■■□□ 2.51
LSM4-204ENST00000594828 STYK1Q6J9G0 422 aa30.75■■■□□ 2.51
LSM4-204ENST00000594828 C21orf2O43822 256 aa30.74■■■□□ 2.51
LSM4-204ENST00000594828 LMNB1P20700 586 aa30.74■■■□□ 2.51
LSM4-204ENST00000594828 MASTLQ96GX5 879 aa30.74■■■□□ 2.51
LSM4-204ENST00000594828 ZNF219Q9P2Y4 722 aaPredicted RBP30.74■■■□□ 2.51
LSM4-204ENST00000594828 SBF1O95248 1867 aa30.73■■■□□ 2.51
LSM4-204ENST00000594828 CHL1O00533 1208 aa30.72■■■□□ 2.51
LSM4-204ENST00000594828 GTF2E1P29083 439 aaPredicted RBP30.72■■■□□ 2.51
LSM4-204ENST00000594828 NMRK2Q9NPI5 230 aa30.72■■■□□ 2.51
LSM4-204ENST00000594828 LAS1LQ9Y4W2 734 aaKnown RBP30.72■■■□□ 2.51
LSM4-204ENST00000594828 COL11A2P13942 1736 aaPredicted RBP30.72■■■□□ 2.51
LSM4-204ENST00000594828 ZBTB3Q9H5J0 574 aa30.71■■■□□ 2.51
LSM4-204ENST00000594828 NFKBIEO00221 500 aa30.7■■■□□ 2.51
LSM4-204ENST00000594828 KDM2BQ8NHM5 1336 aa30.7■■■□□ 2.5
LSM4-204ENST00000594828 KLRG2A4D1S0 409 aaPredicted RBP30.69■■■□□ 2.5
LSM4-204ENST00000594828 PRELPP51888 382 aa30.69■■■□□ 2.5
LSM4-204ENST00000594828 PDIA6Q15084 440 aa30.69■■■□□ 2.5
LSM4-204ENST00000594828 NYXQ9GZU5 481 aa30.69■■■□□ 2.5
LSM4-204ENST00000594828 NPR1P16066 1061 aa30.68■■■□□ 2.5
LSM4-204ENST00000594828 PRPF40BQ6NWY9 871 aaKnown RBP30.68■■■□□ 2.5
LSM4-204ENST00000594828 ZC3H4Q9UPT8 1303 aaKnown RBP30.68■■■□□ 2.5
LSM4-204ENST00000594828 TOMM70O94826 608 aa30.66■■■□□ 2.5
LSM4-204ENST00000594828 LRP10Q7Z4F1 713 aa30.66■■■□□ 2.5
LSM4-204ENST00000594828 NUP98P52948 1817 aa30.66■■■□□ 2.5
LSM4-204ENST00000594828 GPTP24298 496 aa30.65■■■□□ 2.5
LSM4-204ENST00000594828 SOGA3Q5TF21 947 aa30.65■■■□□ 2.5
LSM4-204ENST00000594828 GIGYF2Q6Y7W6 1299 aaKnown RBP30.65■■■□□ 2.5
LSM4-204ENST00000594828 NECTIN2Q92692 538 aa30.65■■■□□ 2.5
LSM4-204ENST00000594828 SLX4Q8IY92 1834 aa30.64■■■□□ 2.5
LSM4-204ENST00000594828 ANXA1P04083 346 aa30.64■■■□□ 2.5
LSM4-204ENST00000594828 PROSER3Q2NL68 480 aa30.64■■■□□ 2.5
LSM4-204ENST00000594828 NUTM1Q86Y26 1132 aa30.64■■■□□ 2.5
LSM4-204ENST00000594828 ZNF34Q8IZ26 560 aa30.64■■■□□ 2.5
LSM4-204ENST00000594828 APAF1O14727 1248 aa30.63■■■□□ 2.49
LSM4-204ENST00000594828 KRT24Q2M2I5 525 aa30.63■■■□□ 2.49
LSM4-204ENST00000594828 RRAGCQ9HB90 399 aa30.63■■■□□ 2.49
LSM4-204ENST00000594828 HSPA6P17066 643 aa30.62■■■□□ 2.49
LSM4-204ENST00000594828 CFAP44Q96MT7 982 aa30.62■■■□□ 2.49
LSM4-204ENST00000594828 TAOK3Q9H2K8 898 aa30.62■■■□□ 2.49
LSM4-204ENST00000594828 UBN2Q6ZU65 1347 aa30.62■■■□□ 2.49
LSM4-204ENST00000594828 ERFEQ4G0M1 354 aa30.61■■■□□ 2.49
LSM4-204ENST00000594828 SUSD4Q5VX71 490 aa30.61■■■□□ 2.49
LSM4-204ENST00000594828 C16orf71Q8IYS4 520 aaPredicted RBP30.61■■■□□ 2.49
LSM4-204ENST00000594828 GLTPD2A6NH11 291 aa30.6■■■□□ 2.49
LSM4-204ENST00000594828 ALDH1B1P30837 517 aa30.6■■■□□ 2.49
LSM4-204ENST00000594828 COPS6Q7L5N1 327 aa30.6■■■□□ 2.49
LSM4-204ENST00000594828 C7orf43Q8WVR3 580 aa30.6■■■□□ 2.49
LSM4-204ENST00000594828 LTBP3Q9NS15 1303 aa30.6■■■□□ 2.49
LSM4-204ENST00000594828 CCDC88AQ3V6T2 1871 aa30.59■■■□□ 2.49
LSM4-204ENST00000594828 DDX21Q9NR30 783 aaKnown RBP eCLIP30.59■■■□□ 2.49
LSM4-204ENST00000594828 CACNA1SQ13698 1873 aa30.59■■■□□ 2.49
LSM4-204ENST00000594828 FER1L6Q2WGJ9 1857 aa30.59■■■□□ 2.49
LSM4-204ENST00000594828 IBTKQ9P2D0 1353 aaPredicted RBP30.58■■■□□ 2.49
LSM4-204ENST00000594828 AIMP1Q12904 312 aaKnown RBP30.58■■■□□ 2.49
LSM4-204ENST00000594828 PARP10Q53GL7 1025 aa30.58■■■□□ 2.49
LSM4-204ENST00000594828 PPP1R42Q7Z4L9 355 aa30.58■■■□□ 2.49
LSM4-204ENST00000594828 ABCC12Q96J65 1359 aa30.57■■■□□ 2.48
LSM4-204ENST00000594828 ARFGEF2Q9Y6D5 1785 aa30.57■■■□□ 2.48
LSM4-204ENST00000594828 ZNF316A6NFI3 1004 aaPredicted RBP30.57■■■□□ 2.48
LSM4-204ENST00000594828 XAGE3Q8WTP9 111 aa30.57■■■□□ 2.48
LSM4-204ENST00000594828 HOXB7P09629 217 aa30.56■■■□□ 2.48
LSM4-204ENST00000594828 CRY2Q49AN0 593 aa30.56■■■□□ 2.48
LSM4-204ENST00000594828 CCDC93Q567U6 631 aa30.56■■■□□ 2.48
LSM4-204ENST00000594828 MBIPQ9NS73 344 aa30.56■■■□□ 2.48
LSM4-204ENST00000594828 NTSR2O95665 410 aa30.55■■■□□ 2.48
LSM4-204ENST00000594828 CALD1Q05682 793 aaKnown RBP30.55■■■□□ 2.48
LSM4-204ENST00000594828 CCDC184Q52MB2 194 aa30.55■■■□□ 2.48
LSM4-204ENST00000594828 HDGFL1Q5TGJ6 251 aa30.55■■■□□ 2.48
LSM4-204ENST00000594828 DPY19L2Q6NUT2 758 aa30.55■■■□□ 2.48
LSM4-204ENST00000594828 RBM46Q8TBY0 533 aaKnown RBP30.55■■■□□ 2.48
LSM4-204ENST00000594828 CHPF2Q9P2E5 772 aa30.54■■■□□ 2.48
LSM4-204ENST00000594828 ZNF853P0CG23 659 aa30.53■■■□□ 2.48
LSM4-204ENST00000594828 HSP90AB3PQ58FF7 597 aa30.53■■■□□ 2.48
LSM4-204ENST00000594828 RPGRQ92834 1020 aaKnown RBP30.53■■■□□ 2.48
LSM4-204ENST00000594828 TNRC6CQ9HCJ0 1690 aaKnown RBP30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms