RNA–Protein interactions for RNA: ENST00000594597.5

GRAMD1A-204, Transcript of GRAM domain containing 1A, humanhuman

TSL 4

Gene GRAMD1A, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-204ENST00000594597 KDM3BQ7LBC6 1761 aa13.55□□□□□ -0.24
GRAMD1A-204ENST00000594597 CTCFP49711 727 aaPredicted RBP13.55□□□□□ -0.24
GRAMD1A-204ENST00000594597 WDR43Q15061 677 aaKnown RBP eCLIP13.55□□□□□ -0.24
GRAMD1A-204ENST00000594597 CCDC85CA6NKD9 419 aa13.54□□□□□ -0.24
GRAMD1A-204ENST00000594597 TTLL6Q8N841 843 aa13.54□□□□□ -0.24
GRAMD1A-204ENST00000594597 PLEKHF1Q96S99 279 aa13.54□□□□□ -0.24
GRAMD1A-204ENST00000594597 BRIP1Q9BX63 1249 aa13.54□□□□□ -0.24
GRAMD1A-204ENST00000594597 MKRN1Q9UHC7 482 aaKnown RBP13.54□□□□□ -0.24
GRAMD1A-204ENST00000594597 A1BGP04217 495 aa13.53□□□□□ -0.24
GRAMD1A-204ENST00000594597 DDX10Q13206 875 aaKnown RBP13.53□□□□□ -0.24
GRAMD1A-204ENST00000594597 SOGA3Q5TF21 947 aa13.53□□□□□ -0.24
GRAMD1A-204ENST00000594597 CNBD1Q8NA66 436 aa13.53□□□□□ -0.24
GRAMD1A-204ENST00000594597 BCL2L12Q9HB09 334 aa13.53□□□□□ -0.24
GRAMD1A-204ENST00000594597 TBC1D2BQ9UPU7 963 aa13.53□□□□□ -0.24
GRAMD1A-204ENST00000594597 ERBB4Q15303 1308 aa13.53□□□□□ -0.24
GRAMD1A-204ENST00000594597 KCNA3P22001 575 aa13.52□□□□□ -0.25
GRAMD1A-204ENST00000594597 LBX1P52954 281 aa13.52□□□□□ -0.25
GRAMD1A-204ENST00000594597 BICDL1Q6ZP65 573 aa13.52□□□□□ -0.25
GRAMD1A-204ENST00000594597 C2CD5Q86YS7 1000 aa13.52□□□□□ -0.25
GRAMD1A-204ENST00000594597 USP16Q9Y5T5 823 aa13.52□□□□□ -0.25
GRAMD1A-204ENST00000594597 SBF1O95248 1867 aa13.52□□□□□ -0.25
GRAMD1A-204ENST00000594597 CAMTA2O94983 1202 aa13.51□□□□□ -0.25
GRAMD1A-204ENST00000594597 DCTN1Q14203 1278 aa13.51□□□□□ -0.25
GRAMD1A-204ENST00000594597 TBC1D9BQ66K14 1250 aa13.51□□□□□ -0.25
GRAMD1A-204ENST00000594597 TPTE2Q6XPS3 522 aa13.51□□□□□ -0.25
GRAMD1A-204ENST00000594597 CNKSR1Q969H4 720 aa13.51□□□□□ -0.25
GRAMD1A-204ENST00000594597 KCNQ3O43525 872 aa13.5□□□□□ -0.25
GRAMD1A-204ENST00000594597 CHRNA5P30532 468 aa13.5□□□□□ -0.25
GRAMD1A-204ENST00000594597 RIPK4P57078 832 aa13.5□□□□□ -0.25
GRAMD1A-204ENST00000594597 KIF6Q6ZMV9 814 aa13.5□□□□□ -0.25
GRAMD1A-204ENST00000594597 NBPF5PQ86XG9 351 aaPredicted RBP13.5□□□□□ -0.25
GRAMD1A-204ENST00000594597 AIDAQ96BJ3 306 aa13.5□□□□□ -0.25
GRAMD1A-204ENST00000594597 NYXQ9GZU5 481 aa13.5□□□□□ -0.25
GRAMD1A-204ENST00000594597 ARFGEF2Q9Y6D5 1785 aa13.5□□□□□ -0.25
GRAMD1A-204ENST00000594597 ANKRD31Q8N7Z5 1873 aa13.49□□□□□ -0.25
GRAMD1A-204ENST00000594597 ERVV-1B6SEH8 477 aa13.49□□□□□ -0.25
GRAMD1A-204ENST00000594597 RNF181Q9P0P0 153 aa13.49□□□□□ -0.25
GRAMD1A-204ENST00000594597 TSPYL4Q9UJ04 414 aa13.49□□□□□ -0.25
GRAMD1A-204ENST00000594597 TNRC6CQ9HCJ0 1690 aaKnown RBP13.49□□□□□ -0.25
GRAMD1A-204ENST00000594597 LMNB1P20700 586 aa13.48□□□□□ -0.25
GRAMD1A-204ENST00000594597 GTF2E1P29083 439 aaPredicted RBP13.48□□□□□ -0.25
GRAMD1A-204ENST00000594597 EIF4A1P60842 406 aaKnown RBP13.48□□□□□ -0.25
GRAMD1A-204ENST00000594597 CALD1Q05682 793 aaKnown RBP13.48□□□□□ -0.25
GRAMD1A-204ENST00000594597 STYK1Q6J9G0 422 aa13.48□□□□□ -0.25
GRAMD1A-204ENST00000594597 PRR5LQ6MZQ0 368 aa13.48□□□□□ -0.25
GRAMD1A-204ENST00000594597 RUNDC1Q96C34 613 aa13.48□□□□□ -0.25
GRAMD1A-204ENST00000594597 CHMP4AQ9BY43 222 aa13.48□□□□□ -0.25
GRAMD1A-204ENST00000594597 CCDC88AQ3V6T2 1871 aa13.48□□□□□ -0.25
GRAMD1A-204ENST00000594597 NUP98P52948 1817 aa13.48□□□□□ -0.25
GRAMD1A-204ENST00000594597 DICER1Q9UPY3 1922 aaKnown RBP13.47□□□□□ -0.25
GRAMD1A-204ENST00000594597 VEGFAP15692 232 aaPredicted RBP13.47□□□□□ -0.25
GRAMD1A-204ENST00000594597 TMPOP42166 694 aaKnown RBP13.47□□□□□ -0.25
GRAMD1A-204ENST00000594597 ZNF622Q969S3 477 aaKnown RBP eCLIP13.47□□□□□ -0.252e-7■■■□□ 16.3
GRAMD1A-204ENST00000594597 MASTLQ96GX5 879 aa13.47□□□□□ -0.25
GRAMD1A-204ENST00000594597 NIP7Q9Y221 180 aaKnown RBP eCLIP13.47□□□□□ -0.25
GRAMD1A-204ENST00000594597 IBTKQ9P2D0 1353 aaPredicted RBP13.46□□□□□ -0.25
GRAMD1A-204ENST00000594597 CREBZFQ9NS37 354 aa13.46□□□□□ -0.25
GRAMD1A-204ENST00000594597 MAP3K15Q6ZN16 1313 aa13.45□□□□□ -0.26
GRAMD1A-204ENST00000594597 CACNA1SQ13698 1873 aa13.45□□□□□ -0.26
GRAMD1A-204ENST00000594597 FER1L6Q2WGJ9 1857 aa13.45□□□□□ -0.26
GRAMD1A-204ENST00000594597 ALDH1B1P30837 517 aa13.45□□□□□ -0.26
GRAMD1A-204ENST00000594597 GRIPAP1Q4V328 841 aa13.45□□□□□ -0.26
GRAMD1A-204ENST00000594597 DPY19L2Q6NUT2 758 aa13.45□□□□□ -0.26
GRAMD1A-204ENST00000594597 WBP1LQ9NX94 342 aa13.45□□□□□ -0.26
GRAMD1A-204ENST00000594597 LTBP3Q9NS15 1303 aa13.44□□□□□ -0.26
GRAMD1A-204ENST00000594597 NBPF26B4DH59 902 aa13.44□□□□□ -0.26
GRAMD1A-204ENST00000594597 SRGNP10124 158 aa13.44□□□□□ -0.26
GRAMD1A-204ENST00000594597 NPR1P16066 1061 aa13.44□□□□□ -0.26
GRAMD1A-204ENST00000594597 HSP90AB3PQ58FF7 597 aa13.44□□□□□ -0.26
GRAMD1A-204ENST00000594597 NBPF10Q6P3W6 841 aaKnown RBP13.44□□□□□ -0.26
GRAMD1A-204ENST00000594597 NBPF15Q8N660 670 aa13.44□□□□□ -0.26
GRAMD1A-204ENST00000594597 PRKRIP1Q9H875 184 aaPredicted RBP13.44□□□□□ -0.26
GRAMD1A-204ENST00000594597 MIS18AQ9NYP9 233 aa13.44□□□□□ -0.26
GRAMD1A-204ENST00000594597 COL11A2P13942 1736 aaPredicted RBP13.44□□□□□ -0.26
GRAMD1A-204ENST00000594597 RNF123Q5XPI4 1314 aa13.43□□□□□ -0.26
GRAMD1A-204ENST00000594597 PRAMEF22A3QJZ6 481 aa13.43□□□□□ -0.26
GRAMD1A-204ENST00000594597 HOXB7P09629 217 aa13.43□□□□□ -0.26
GRAMD1A-204ENST00000594597 HSPA8P11142 646 aaKnown RBP13.43□□□□□ -0.26
GRAMD1A-204ENST00000594597 RIC1Q4ADV7 1423 aa13.43□□□□□ -0.26
GRAMD1A-204ENST00000594597 PARP10Q53GL7 1025 aa13.43□□□□□ -0.26
GRAMD1A-204ENST00000594597 PPP1R42Q7Z4L9 355 aa13.43□□□□□ -0.26
GRAMD1A-204ENST00000594597 TIAM2Q8IVF5 1701 aa13.43□□□□□ -0.26
GRAMD1A-204ENST00000594597 TAOK3Q9H2K8 898 aa13.43□□□□□ -0.26
GRAMD1A-204ENST00000594597 RRP7AQ9Y3A4 280 aaKnown RBP13.43□□□□□ -0.26
GRAMD1A-204ENST00000594597 PIP4K2AP48426 406 aaPredicted RBP13.42□□□□□ -0.26
GRAMD1A-204ENST00000594597 CCDC93Q567U6 631 aa13.42□□□□□ -0.26
GRAMD1A-204ENST00000594597 CC2D2BQ6DHV5 1058 aa13.42□□□□□ -0.26
GRAMD1A-204ENST00000594597 TMX4Q9H1E5 349 aaPredicted RBP13.42□□□□□ -0.26
GRAMD1A-204ENST00000594597 KLRG2A4D1S0 409 aaPredicted RBP13.41□□□□□ -0.26
GRAMD1A-204ENST00000594597 GLTPD2A6NH11 291 aa13.41□□□□□ -0.26
GRAMD1A-204ENST00000594597 MYL6BP14649 208 aa13.41□□□□□ -0.26
GRAMD1A-204ENST00000594597 VEGFBP49765 207 aa13.41□□□□□ -0.26
GRAMD1A-204ENST00000594597 PRPF40BQ6NWY9 871 aaKnown RBP13.41□□□□□ -0.26
GRAMD1A-204ENST00000594597 GIGYF2Q6Y7W6 1299 aaKnown RBP13.41□□□□□ -0.26
GRAMD1A-204ENST00000594597 RTKN2Q8IZC4 609 aa13.41□□□□□ -0.26
GRAMD1A-204ENST00000594597 CFAP44Q96MT7 982 aa13.41□□□□□ -0.26
GRAMD1A-204ENST00000594597 THUMPD2Q9BTF0 503 aaKnown RBP13.41□□□□□ -0.26
GRAMD1A-204ENST00000594597 CNTNAP1P78357 1384 aa13.41□□□□□ -0.26
GRAMD1A-204ENST00000594597 C21orf2O43822 256 aa13.4□□□□□ -0.26
GRAMD1A-204ENST00000594597 NEUROD2Q15784 382 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms