RNA–Protein interactions for RNA: ENST00000593330.1

SOX2-OT-219, SOX2 overlapping transcript, humanhuman

TSL 3

Gene SOX2-OT, Length 468 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-219ENST00000593330 ZNF587Q96SQ5 575 aaPredicted RBP10.68□□□□□ -0.7
SOX2-OT-219ENST00000593330 STRN4Q9NRL3 753 aa10.68□□□□□ -0.7
SOX2-OT-219ENST00000593330 HCN2Q9UL51 889 aa10.68□□□□□ -0.7
SOX2-OT-219ENST00000593330 EML1O00423 815 aa10.67□□□□□ -0.7
SOX2-OT-219ENST00000593330 ITGB7P26010 798 aa10.67□□□□□ -0.7
SOX2-OT-219ENST00000593330 GTF2IP78347 998 aa10.67□□□□□ -0.7
SOX2-OT-219ENST00000593330 NKAPLQ5M9Q1 402 aa10.67□□□□□ -0.7
SOX2-OT-219ENST00000593330 LRRC69Q6ZNQ3 347 aa10.67□□□□□ -0.7
SOX2-OT-219ENST00000593330 TRIM50Q86XT4 487 aa10.67□□□□□ -0.7
SOX2-OT-219ENST00000593330 MDFIQ99750 246 aa10.67□□□□□ -0.7
SOX2-OT-219ENST00000593330 SERTM1A2A2V5 107 aa10.66□□□□□ -0.7
SOX2-OT-219ENST00000593330 PARP3Q9Y6F1 533 aa10.66□□□□□ -0.7
SOX2-OT-219ENST00000593330 C9orf172C9J069 976 aa10.65□□□□□ -0.7
SOX2-OT-219ENST00000593330 SKIP12755 728 aa10.65□□□□□ -0.7
SOX2-OT-219ENST00000593330 TXLNAP40222 546 aa10.65□□□□□ -0.7
SOX2-OT-219ENST00000593330 C1orf53Q5VUE5 145 aa10.65□□□□□ -0.7
SOX2-OT-219ENST00000593330 TPSG1Q9NRR2 321 aa10.65□□□□□ -0.7
SOX2-OT-219ENST00000593330 USP3Q9Y6I4 520 aa10.65□□□□□ -0.7
SOX2-OT-219ENST00000593330 RHPN1Q8TCX5 695 aa10.64□□□□□ -0.71
SOX2-OT-219ENST00000593330 EFCC1Q9HA90 598 aa10.64□□□□□ -0.71
SOX2-OT-219ENST00000593330 ZNF358Q9NW07 568 aa10.64□□□□□ -0.71
SOX2-OT-219ENST00000593330 DYRK3O43781 588 aa10.63□□□□□ -0.71
SOX2-OT-219ENST00000593330 ADH7P40394 386 aa10.63□□□□□ -0.71
SOX2-OT-219ENST00000593330 SPEM2Q0P670 501 aa10.63□□□□□ -0.71
SOX2-OT-219ENST00000593330 SLC9A9Q8IVB4 645 aa10.63□□□□□ -0.71
SOX2-OT-219ENST00000593330 MICALL1Q8N3F8 863 aa10.63□□□□□ -0.71
SOX2-OT-219ENST00000593330 ZFP64Q9NPA5 681 aa10.63□□□□□ -0.71
SOX2-OT-219ENST00000593330 NRG1Q02297 640 aaPredicted RBP10.62□□□□□ -0.71
SOX2-OT-219ENST00000593330 HIF1AQ16665 826 aa10.62□□□□□ -0.71
SOX2-OT-219ENST00000593330 NBPF11Q86T75 865 aa10.62□□□□□ -0.71
SOX2-OT-219ENST00000593330 ZDHHC1Q8WTX9 485 aa10.62□□□□□ -0.71
SOX2-OT-219ENST00000593330 LILRB5O75023 590 aa10.61□□□□□ -0.71
SOX2-OT-219ENST00000593330 H2AFB1P0C5Y9 115 aa10.61□□□□□ -0.71
SOX2-OT-219ENST00000593330 H2AFB2P0C5Z0 115 aa10.61□□□□□ -0.71
SOX2-OT-219ENST00000593330 ATP1A2P50993 1020 aa10.61□□□□□ -0.71
SOX2-OT-219ENST00000593330 PSMA6P60900 246 aaKnown RBP10.61□□□□□ -0.71
SOX2-OT-219ENST00000593330 ARTNQ5T4W7 220 aa10.61□□□□□ -0.71
SOX2-OT-219ENST00000593330 HIRAP54198 1017 aaPredicted RBP10.6□□□□□ -0.71
SOX2-OT-219ENST00000593330 KCNQ4P56696 695 aa10.6□□□□□ -0.71
SOX2-OT-219ENST00000593330 RAC1P63000 192 aa10.6□□□□□ -0.71
SOX2-OT-219ENST00000593330 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.6□□□□□ -0.71
SOX2-OT-219ENST00000593330 ELNP15502 786 aa10.59□□□□□ -0.71
SOX2-OT-219ENST00000593330 NCOA4Q13772 614 aa10.59□□□□□ -0.71
SOX2-OT-219ENST00000593330 TRAPPC3LQ5T215 181 aa10.59□□□□□ -0.71
SOX2-OT-219ENST00000593330 CEP63Q96MT8 703 aa10.59□□□□□ -0.71
SOX2-OT-219ENST00000593330 BRD7Q9NPI1 651 aa10.59□□□□□ -0.71
SOX2-OT-219ENST00000593330 ALBP02768 609 aa10.58□□□□□ -0.72
SOX2-OT-219ENST00000593330 NID1P14543 1247 aa10.58□□□□□ -0.72
SOX2-OT-219ENST00000593330 EPHA4P54764 986 aa10.58□□□□□ -0.72
SOX2-OT-219ENST00000593330 SFSWAPQ12872 951 aaKnown RBP10.58□□□□□ -0.72
SOX2-OT-219ENST00000593330 SLC30A3Q99726 388 aa10.58□□□□□ -0.72
SOX2-OT-219ENST00000593330 KCNH4Q9UQ05 1017 aa10.58□□□□□ -0.72
SOX2-OT-219ENST00000593330 STARD13Q9Y3M8 1113 aa10.57□□□□□ -0.72
SOX2-OT-219ENST00000593330 RBM19Q9Y4C8 960 aaKnown RBP10.57□□□□□ -0.72
SOX2-OT-219ENST00000593330 PIK3CDO00329 1044 aa10.56□□□□□ -0.72
SOX2-OT-219ENST00000593330 COL9A3Q14050 684 aaPredicted RBP10.56□□□□□ -0.72
SOX2-OT-219ENST00000593330 PRSS36Q5K4E3 855 aa10.56□□□□□ -0.72
SOX2-OT-219ENST00000593330 USP17L5A8MUK1 530 aa10.55□□□□□ -0.72
SOX2-OT-219ENST00000593330 FAM229AH3BQW9 127 aa10.55□□□□□ -0.72
SOX2-OT-219ENST00000593330 M0R2N6 131 aa10.55□□□□□ -0.72
SOX2-OT-219ENST00000593330 MCM6Q14566 821 aa10.55□□□□□ -0.72
SOX2-OT-219ENST00000593330 TNS4Q8IZW8 715 aa10.55□□□□□ -0.72
SOX2-OT-219ENST00000593330 C7orf43Q8WVR3 580 aa10.55□□□□□ -0.72
SOX2-OT-219ENST00000593330 ALG2Q9H553 416 aa10.55□□□□□ -0.72
SOX2-OT-219ENST00000593330 C20orf204Q6ZNR8 217 aa10.54□□□□□ -0.72
SOX2-OT-219ENST00000593330 TXNRD3Q86VQ6 643 aa10.54□□□□□ -0.72
SOX2-OT-219ENST00000593330 ADGRE1Q14246 886 aa10.53□□□□□ -0.72
SOX2-OT-219ENST00000593330 GRIK4Q16099 956 aa10.53□□□□□ -0.72
SOX2-OT-219ENST00000593330 PCSK7Q16549 785 aa10.53□□□□□ -0.72
SOX2-OT-219ENST00000593330 LENG1Q96BZ8 264 aaPredicted RBP10.53□□□□□ -0.72
SOX2-OT-219ENST00000593330 SFI1A8K8P3 1242 aa10.52□□□□□ -0.73
SOX2-OT-219ENST00000593330 LRP8Q14114 963 aa10.52□□□□□ -0.73
SOX2-OT-219ENST00000593330 PLEKHM2Q8IWE5 1019 aa10.52□□□□□ -0.73
SOX2-OT-219ENST00000593330 TPCN2Q8NHX9 752 aa10.52□□□□□ -0.73
SOX2-OT-219ENST00000593330 UBE2OQ9C0C9 1292 aaKnown RBP10.52□□□□□ -0.73
SOX2-OT-219ENST00000593330 TYRO3Q06418 890 aa10.51□□□□□ -0.73
SOX2-OT-219ENST00000593330 MBTPS1Q14703 1052 aa10.51□□□□□ -0.73
SOX2-OT-219ENST00000593330 CCDC102BQ68D86 513 aa10.51□□□□□ -0.73
SOX2-OT-219ENST00000593330 POTEAQ6S8J7 498 aa10.51□□□□□ -0.73
SOX2-OT-219ENST00000593330 PHACTR1Q9C0D0 580 aa10.51□□□□□ -0.73
SOX2-OT-219ENST00000593330 A0A0A0MRY4 1105 aa10.5□□□□□ -0.73
SOX2-OT-219ENST00000593330 PALM3A6NDB9 673 aaPredicted RBP10.5□□□□□ -0.73
SOX2-OT-219ENST00000593330 TBCELQ5QJ74 424 aa10.5□□□□□ -0.73
SOX2-OT-219ENST00000593330 LARGE2Q8N3Y3 721 aa10.5□□□□□ -0.73
SOX2-OT-219ENST00000593330 BHMTQ93088 406 aa10.5□□□□□ -0.73
SOX2-OT-219ENST00000593330 KRTAP9-2Q9BYQ4 174 aa10.5□□□□□ -0.73
SOX2-OT-219ENST00000593330 RAD21O60216 631 aa10.49□□□□□ -0.73
SOX2-OT-219ENST00000593330 FOXD4L6Q3SYB3 417 aaPredicted RBP10.49□□□□□ -0.73
SOX2-OT-219ENST00000593330 FOXD4L3Q6VB84 417 aaPredicted RBP10.49□□□□□ -0.73
SOX2-OT-219ENST00000593330 C8orf86Q6ZUL3 223 aa10.49□□□□□ -0.73
SOX2-OT-219ENST00000593330 GAS2L2Q8NHY3 880 aa10.49□□□□□ -0.73
SOX2-OT-219ENST00000593330 SUSD3Q96L08 255 aa10.49□□□□□ -0.73
SOX2-OT-219ENST00000593330 PNMA5Q96PV4 448 aa10.49□□□□□ -0.73
SOX2-OT-219ENST00000593330 JPH1Q9HDC5 661 aaPredicted RBP10.49□□□□□ -0.73
SOX2-OT-219ENST00000593330 COG6Q9Y2V7 657 aa10.49□□□□□ -0.73
SOX2-OT-219ENST00000593330 RAB44Q7Z6P3 723 aaPredicted RBP10.48□□□□□ -0.73
SOX2-OT-219ENST00000593330 STAG2Q8N3U4 1231 aa10.48□□□□□ -0.73
SOX2-OT-219ENST00000593330 USP21Q9UK80 565 aa10.48□□□□□ -0.73
SOX2-OT-219ENST00000593330 SLC6A14Q9UN76 642 aa10.48□□□□□ -0.73
SOX2-OT-219ENST00000593330 HCN4Q9Y3Q4 1203 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms