RNA–Protein interactions for RNA: ENST00000592928.2

RAD51D-223, Transcript of RAD51 paralog D, humanhuman

TSL 1 (best)

Gene RAD51D, Length 207 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51D-223ENST00000592928 TTLL6Q8N841 843 aa12.66□□□□□ -0.38
RAD51D-223ENST00000592928 GPBP1L1Q9HC44 474 aaPredicted RBP12.66□□□□□ -0.38
RAD51D-223ENST00000592928 TRIM35Q9UPQ4 493 aa12.66□□□□□ -0.38
RAD51D-223ENST00000592928 RRP7AQ9Y3A4 280 aaKnown RBP12.66□□□□□ -0.38
RAD51D-223ENST00000592928 MAP3K15Q6ZN16 1313 aa12.65□□□□□ -0.38
RAD51D-223ENST00000592928 NUP98P52948 1817 aa12.65□□□□□ -0.38
RAD51D-223ENST00000592928 RIC1Q4ADV7 1423 aa12.65□□□□□ -0.38
RAD51D-223ENST00000592928 ERVV-1B6SEH8 477 aa12.65□□□□□ -0.38
RAD51D-223ENST00000592928 CHL1O00533 1208 aa12.65□□□□□ -0.38
RAD51D-223ENST00000592928 NIP7Q9Y221 180 aaKnown RBP eCLIP12.65□□□□□ -0.38
RAD51D-223ENST00000592928 SBF1O95248 1867 aa12.65□□□□□ -0.38
RAD51D-223ENST00000592928 ZC3H4Q9UPT8 1303 aaKnown RBP12.64□□□□□ -0.39
RAD51D-223ENST00000592928 KIF6Q6ZMV9 814 aa12.64□□□□□ -0.39
RAD51D-223ENST00000592928 LRP10Q7Z4F1 713 aa12.64□□□□□ -0.39
RAD51D-223ENST00000592928 NBPF5PQ86XG9 351 aaPredicted RBP12.64□□□□□ -0.39
RAD51D-223ENST00000592928 TNRC6CQ9HCJ0 1690 aaKnown RBP12.64□□□□□ -0.39
RAD51D-223ENST00000592928 TIAM2Q8IVF5 1701 aa12.63□□□□□ -0.39
RAD51D-223ENST00000592928 ZNF316A6NFI3 1004 aaPredicted RBP12.63□□□□□ -0.39
RAD51D-223ENST00000592928 NPHP1O15259 732 aa12.63□□□□□ -0.39
RAD51D-223ENST00000592928 HOXB7P09629 217 aa12.63□□□□□ -0.39
RAD51D-223ENST00000592928 NEUROD2Q15784 382 aa12.63□□□□□ -0.39
RAD51D-223ENST00000592928 HLFQ16534 295 aa12.63□□□□□ -0.39
RAD51D-223ENST00000592928 C9orf131Q5VYM1 1079 aa12.63□□□□□ -0.39
RAD51D-223ENST00000592928 STYK1Q6J9G0 422 aa12.63□□□□□ -0.39
RAD51D-223ENST00000592928 ANKRD36CQ5JPF3 1778 aa12.63□□□□□ -0.39
RAD51D-223ENST00000592928 FER1L6Q2WGJ9 1857 aa12.63□□□□□ -0.39
RAD51D-223ENST00000592928 CACNA1SQ13698 1873 aa12.62□□□□□ -0.39
RAD51D-223ENST00000592928 KLRG2A4D1S0 409 aaPredicted RBP12.62□□□□□ -0.39
RAD51D-223ENST00000592928 SRGNP10124 158 aa12.62□□□□□ -0.39
RAD51D-223ENST00000592928 MYL6BP14649 208 aa12.62□□□□□ -0.39
RAD51D-223ENST00000592928 PDIA6Q15084 440 aa12.62□□□□□ -0.39
RAD51D-223ENST00000592928 TPTE2Q6XPS3 522 aa12.62□□□□□ -0.39
RAD51D-223ENST00000592928 TTLL7Q6ZT98 887 aa12.62□□□□□ -0.39
RAD51D-223ENST00000592928 CCDC24Q8N4L8 307 aa12.62□□□□□ -0.39
RAD51D-223ENST00000592928 ABCC12Q96J65 1359 aa12.61□□□□□ -0.39
RAD51D-223ENST00000592928 NFKBIEO00221 500 aa12.61□□□□□ -0.39
RAD51D-223ENST00000592928 RASSF7Q02833 373 aa12.61□□□□□ -0.39
RAD51D-223ENST00000592928 ZNF526Q8TF50 670 aaPredicted RBP12.61□□□□□ -0.39
RAD51D-223ENST00000592928 CNKSR1Q969H4 720 aa12.61□□□□□ -0.39
RAD51D-223ENST00000592928 MASTLQ96GX5 879 aa12.61□□□□□ -0.39
RAD51D-223ENST00000592928 CFAP44Q96MT7 982 aa12.61□□□□□ -0.39
RAD51D-223ENST00000592928 NYXQ9GZU5 481 aa12.61□□□□□ -0.39
RAD51D-223ENST00000592928 RNF181Q9P0P0 153 aa12.61□□□□□ -0.39
RAD51D-223ENST00000592928 UBN2Q6ZU65 1347 aa12.61□□□□□ -0.39
RAD51D-223ENST00000592928 LTBP3Q9NS15 1303 aa12.61□□□□□ -0.39
RAD51D-223ENST00000592928 SLX4Q8IY92 1834 aa12.6□□□□□ -0.39
RAD51D-223ENST00000592928 APAF1O14727 1248 aa12.6□□□□□ -0.39
RAD51D-223ENST00000592928 KIF3CO14782 793 aa12.6□□□□□ -0.39
RAD51D-223ENST00000592928 CALD1Q05682 793 aaKnown RBP12.6□□□□□ -0.39
RAD51D-223ENST00000592928 GIGYF2Q6Y7W6 1299 aaKnown RBP12.6□□□□□ -0.39
RAD51D-223ENST00000592928 NGEFQ8N5V2 710 aa12.6□□□□□ -0.39
RAD51D-223ENST00000592928 ZNF622Q969S3 477 aaKnown RBP eCLIP12.6□□□□□ -0.39
RAD51D-223ENST00000592928 ZBTB3Q9H5J0 574 aa12.6□□□□□ -0.39
RAD51D-223ENST00000592928 ZNF853P0CG23 659 aa12.59□□□□□ -0.39
RAD51D-223ENST00000592928 NPR1P16066 1061 aa12.59□□□□□ -0.39
RAD51D-223ENST00000592928 EIF2S2P20042 333 aaKnown RBP12.59□□□□□ -0.39
RAD51D-223ENST00000592928 LMNB1P20700 586 aa12.59□□□□□ -0.39
RAD51D-223ENST00000592928 PROSER3Q2NL68 480 aa12.59□□□□□ -0.39
RAD51D-223ENST00000592928 SOGA3Q5TF21 947 aa12.59□□□□□ -0.39
RAD51D-223ENST00000592928 PRPF40BQ6NWY9 871 aaKnown RBP12.59□□□□□ -0.39
RAD51D-223ENST00000592928 DDX21Q9NR30 783 aaKnown RBP eCLIP12.59□□□□□ -0.39
RAD51D-223ENST00000592928 IFT57Q9NWB7 429 aa12.59□□□□□ -0.39
RAD51D-223ENST00000592928 RNF123Q5XPI4 1314 aa12.59□□□□□ -0.39
RAD51D-223ENST00000592928 DICER1Q9UPY3 1922 aaKnown RBP12.58□□□□□ -0.39
RAD51D-223ENST00000592928 PRELPP51888 382 aa12.58□□□□□ -0.4
RAD51D-223ENST00000592928 KRT24Q2M2I5 525 aa12.58□□□□□ -0.4
RAD51D-223ENST00000592928 CRY2Q49AN0 593 aa12.58□□□□□ -0.4
RAD51D-223ENST00000592928 PARP10Q53GL7 1025 aa12.58□□□□□ -0.4
RAD51D-223ENST00000592928 ZNF34Q8IZ26 560 aa12.58□□□□□ -0.4
RAD51D-223ENST00000592928 LAS1LQ9Y4W2 734 aaKnown RBP12.58□□□□□ -0.4
RAD51D-223ENST00000592928 KDM2BQ8NHM5 1336 aa12.58□□□□□ -0.4
RAD51D-223ENST00000592928 ANP32CO43423 234 aa12.57□□□□□ -0.4
RAD51D-223ENST00000592928 C21orf2O43822 256 aa12.57□□□□□ -0.4
RAD51D-223ENST00000592928 NTSR2O95665 410 aa12.57□□□□□ -0.4
RAD51D-223ENST00000592928 ANXA1P04083 346 aa12.57□□□□□ -0.4
RAD51D-223ENST00000592928 GPTP24298 496 aa12.57□□□□□ -0.4
RAD51D-223ENST00000592928 GNAI1P63096 354 aa12.57□□□□□ -0.4
RAD51D-223ENST00000592928 CCDC184Q52MB2 194 aa12.57□□□□□ -0.4
RAD51D-223ENST00000592928 HSP90AB3PQ58FF7 597 aa12.57□□□□□ -0.4
RAD51D-223ENST00000592928 HDGFL1Q5TGJ6 251 aa12.57□□□□□ -0.4
RAD51D-223ENST00000592928 MBIPQ9NS73 344 aa12.57□□□□□ -0.4
RAD51D-223ENST00000592928 CCDC88AQ3V6T2 1871 aa12.57□□□□□ -0.4
RAD51D-223ENST00000592928 SNED1Q8TER0 1413 aa12.56□□□□□ -0.4
RAD51D-223ENST00000592928 SENP3-EIF4A1A0A087X0R7 540 aa12.56□□□□□ -0.4
RAD51D-223ENST00000592928 FAM177BA6PVY3 158 aa12.56□□□□□ -0.4
RAD51D-223ENST00000592928 GTF2E1P29083 439 aaPredicted RBP12.56□□□□□ -0.4
RAD51D-223ENST00000592928 CCDC27Q2M243 656 aa12.56□□□□□ -0.4
RAD51D-223ENST00000592928 NCBP3Q53F19 620 aaKnown RBP12.56□□□□□ -0.4
RAD51D-223ENST00000592928 CCDC93Q567U6 631 aa12.56□□□□□ -0.4
RAD51D-223ENST00000592928 SUSD4Q5VX71 490 aa12.56□□□□□ -0.4
RAD51D-223ENST00000592928 NUTM1Q86Y26 1132 aa12.56□□□□□ -0.4
RAD51D-223ENST00000592928 XAGE3Q8WTP9 111 aa12.56□□□□□ -0.4
RAD51D-223ENST00000592928 C7orf43Q8WVR3 580 aa12.56□□□□□ -0.4
RAD51D-223ENST00000592928 TAOK3Q9H2K8 898 aa12.56□□□□□ -0.4
RAD51D-223ENST00000592928 CHPF2Q9P2E5 772 aa12.56□□□□□ -0.4
RAD51D-223ENST00000592928 ERFEQ4G0M1 354 aa12.55□□□□□ -0.4
RAD51D-223ENST00000592928 DUSP27Q5VZP5 1158 aa12.55□□□□□ -0.4
RAD51D-223ENST00000592928 COPS6Q7L5N1 327 aa12.55□□□□□ -0.4
RAD51D-223ENST00000592928 PPP1R42Q7Z4L9 355 aa12.55□□□□□ -0.4
RAD51D-223ENST00000592928 NECTIN2Q92692 538 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms