RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 CPSF1Q10570 1443 aaKnown RBP7.55□□□□□ -1.2
ERCC1-216ENST00000592444 HMGB2P26583 209 aaKnown RBP7.55□□□□□ -1.2
ERCC1-216ENST00000592444 BRPF1P55201 1214 aaPredicted RBP7.55□□□□□ -1.2
ERCC1-216ENST00000592444 CIAPIN1Q6FI81 312 aa7.55□□□□□ -1.2
ERCC1-216ENST00000592444 TAF1DQ9H5J8 278 aaPredicted RBP7.55□□□□□ -1.2
ERCC1-216ENST00000592444 NLRP2Q9NX02 1062 aa7.55□□□□□ -1.2
ERCC1-216ENST00000592444 POLR3AO14802 1390 aaPredicted RBP7.55□□□□□ -1.2
ERCC1-216ENST00000592444 DOT1LQ8TEK3 1739 aa7.55□□□□□ -1.2
ERCC1-216ENST00000592444 NSD3Q9BZ95 1437 aa7.54□□□□□ -1.2
ERCC1-216ENST00000592444 IQCA1LA6NCM1 817 aa7.54□□□□□ -1.2
ERCC1-216ENST00000592444 TK2O00142 265 aa7.54□□□□□ -1.2
ERCC1-216ENST00000592444 PLA2G5P39877 138 aa7.54□□□□□ -1.2
ERCC1-216ENST00000592444 FOXK1P85037 733 aa7.54□□□□□ -1.2
ERCC1-216ENST00000592444 CTU1Q7Z7A3 348 aaKnown RBP7.54□□□□□ -1.2
ERCC1-216ENST00000592444 ARHGEF25Q86VW2 580 aa7.54□□□□□ -1.2
ERCC1-216ENST00000592444 PTCD2Q8WV60 388 aaKnown RBP7.54□□□□□ -1.2
ERCC1-216ENST00000592444 SNX27Q96L92 541 aa7.54□□□□□ -1.2
ERCC1-216ENST00000592444 GPHNQ9NQX3 736 aaPredicted RBP7.54□□□□□ -1.2
ERCC1-216ENST00000592444 DDX21Q9NR30 783 aaKnown RBP eCLIP7.54□□□□□ -1.2
ERCC1-216ENST00000592444 PIK3C2GO75747 1445 aa7.53□□□□□ -1.2
ERCC1-216ENST00000592444 SLIT3O75094 1523 aa7.53□□□□□ -1.2
ERCC1-216ENST00000592444 BRCA2P51587 3418 aa7.53□□□□□ -1.2
ERCC1-216ENST00000592444 FMR1Q06787 632 aaKnown RBP eCLIP7.53□□□□□ -1.2
ERCC1-216ENST00000592444 FAM50AQ14320 339 aaKnown RBP7.53□□□□□ -1.2
ERCC1-216ENST00000592444 RGL3Q3MIN7 710 aa7.53□□□□□ -1.2
ERCC1-216ENST00000592444 ERFEQ4G0M1 354 aa7.53□□□□□ -1.2
ERCC1-216ENST00000592444 PLPP6Q8IY26 295 aa7.53□□□□□ -1.2
ERCC1-216ENST00000592444 FAM122AQ96E09 287 aa7.53□□□□□ -1.2
ERCC1-216ENST00000592444 PARP3Q9Y6F1 533 aa7.53□□□□□ -1.2
ERCC1-216ENST00000592444 RANBP2P49792 3224 aaKnown RBP7.52□□□□□ -1.21
ERCC1-216ENST00000592444 NFKBIEO00221 500 aa7.52□□□□□ -1.21
ERCC1-216ENST00000592444 TMF1P82094 1093 aa7.52□□□□□ -1.21
ERCC1-216ENST00000592444 NBPF1Q3BBV0 1214 aa7.52□□□□□ -1.21
ERCC1-216ENST00000592444 CFAP70Q5T0N1 1121 aa7.52□□□□□ -1.21
ERCC1-216ENST00000592444 NLGN1Q8N2Q7 840 aa7.52□□□□□ -1.21
ERCC1-216ENST00000592444 C14orf93Q9H972 538 aaKnown RBP7.52□□□□□ -1.21
ERCC1-216ENST00000592444 TRAK1Q9UPV9 953 aa7.51□□□□□ -1.21
ERCC1-216ENST00000592444 TLL2Q9Y6L7 1015 aa7.51□□□□□ -1.21
ERCC1-216ENST00000592444 C4AP0C0L4 1744 aa7.51□□□□□ -1.21
ERCC1-216ENST00000592444 PALLDQ8WX93 1383 aa7.5□□□□□ -1.21
ERCC1-216ENST00000592444 PLEKHG3A1L390 1219 aa7.5□□□□□ -1.21
ERCC1-216ENST00000592444 DSG2Q14126 1118 aa7.5□□□□□ -1.21
ERCC1-216ENST00000592444 NKX1-1Q15270 411 aaPredicted RBP7.5□□□□□ -1.21
ERCC1-216ENST00000592444 PPP4R3BQ5MIZ7 849 aa7.5□□□□□ -1.21
ERCC1-216ENST00000592444 CST9Q5W186 159 aa7.5□□□□□ -1.21
ERCC1-216ENST00000592444 KCTD12Q96CX2 325 aaKnown RBP7.5□□□□□ -1.21
ERCC1-216ENST00000592444 GNPATO15228 680 aa7.49□□□□□ -1.21
ERCC1-216ENST00000592444 ZIC5Q96T25 663 aa7.49□□□□□ -1.21
ERCC1-216ENST00000592444 RYDENQ9NUL5 291 aaKnown RBP7.49□□□□□ -1.21
ERCC1-216ENST00000592444 ADAMTSL1Q8N6G6 1762 aa7.48□□□□□ -1.21
ERCC1-216ENST00000592444 SCN4AP35499 1836 aa7.48□□□□□ -1.21
ERCC1-216ENST00000592444 CEP290O15078 2479 aa7.48□□□□□ -1.21
ERCC1-216ENST00000592444 TBC1D12O60347 775 aa7.48□□□□□ -1.21
ERCC1-216ENST00000592444 EPHX2P34913 555 aa7.48□□□□□ -1.21
ERCC1-216ENST00000592444 CCDC24Q8N4L8 307 aa7.48□□□□□ -1.21
ERCC1-216ENST00000592444 LINC00116Q8NCU8 138 aa7.48□□□□□ -1.21
ERCC1-216ENST00000592444 HRO43593 1189 aa7.47□□□□□ -1.21
ERCC1-216ENST00000592444 GYS1P13807 737 aa7.47□□□□□ -1.21
ERCC1-216ENST00000592444 PSEN2P49810 448 aa7.47□□□□□ -1.21
ERCC1-216ENST00000592444 DMRTA1Q5VZB9 504 aa7.47□□□□□ -1.21
ERCC1-216ENST00000592444 CDK19Q9BWU1 502 aa7.47□□□□□ -1.21
ERCC1-216ENST00000592444 RBM27Q9P2N5 1060 aaKnown RBP7.47□□□□□ -1.21
ERCC1-216ENST00000592444 HACL1Q9UJ83 578 aa7.47□□□□□ -1.21
ERCC1-216ENST00000592444 H0YGN5 161 aa7.46□□□□□ -1.22
ERCC1-216ENST00000592444 TRAF5O00463 557 aa7.46□□□□□ -1.22
ERCC1-216ENST00000592444 TRPA1O75762 1119 aa7.46□□□□□ -1.22
ERCC1-216ENST00000592444 PKN2Q16513 984 aaKnown RBP7.46□□□□□ -1.22
ERCC1-216ENST00000592444 AKAP4Q5JQC9 854 aa7.46□□□□□ -1.22
ERCC1-216ENST00000592444 TRAPPC3LQ5T215 181 aa7.46□□□□□ -1.22
ERCC1-216ENST00000592444 SAPCD2Q86UD0 394 aa7.46□□□□□ -1.22
ERCC1-216ENST00000592444 PNMA8AQ86V59 439 aaPredicted RBP7.46□□□□□ -1.22
ERCC1-216ENST00000592444 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.46□□□□□ -1.22
ERCC1-216ENST00000592444 KCNH5Q8NCM2 988 aa7.46□□□□□ -1.22
ERCC1-216ENST00000592444 SAGE1Q9NXZ1 904 aa7.46□□□□□ -1.22
ERCC1-216ENST00000592444 DICER1Q9UPY3 1922 aaKnown RBP7.46□□□□□ -1.22
ERCC1-216ENST00000592444 NOGQ13253 232 aa7.44□□□□□ -1.22
ERCC1-216ENST00000592444 MPRIPQ6WCQ1 1025 aa7.44□□□□□ -1.22
ERCC1-216ENST00000592444 TTLL6Q8N841 843 aa7.44□□□□□ -1.22
ERCC1-216ENST00000592444 ANKRD24Q8TF21 1146 aa7.44□□□□□ -1.22
ERCC1-216ENST00000592444 CRISPLD2Q9H0B8 497 aa7.44□□□□□ -1.22
ERCC1-216ENST00000592444 RNF186Q9NXI6 227 aa7.44□□□□□ -1.22
ERCC1-216ENST00000592444 ERBB4Q15303 1308 aa7.44□□□□□ -1.22
ERCC1-216ENST00000592444 ROCK1Q13464 1354 aa7.44□□□□□ -1.22
ERCC1-216ENST00000592444 LAMA3Q16787 3333 aa7.44□□□□□ -1.22
ERCC1-216ENST00000592444 RGS20O76081 388 aa7.43□□□□□ -1.22
ERCC1-216ENST00000592444 DDR1Q08345 913 aa7.43□□□□□ -1.22
ERCC1-216ENST00000592444 SYNE4Q8N205 404 aa7.43□□□□□ -1.22
ERCC1-216ENST00000592444 ZCRB1Q8TBF4 217 aaKnown RBP7.43□□□□□ -1.22
ERCC1-216ENST00000592444 OXER1Q8TDS5 423 aa7.43□□□□□ -1.22
ERCC1-216ENST00000592444 ARHGEF1Q92888 912 aaKnown RBP7.43□□□□□ -1.22
ERCC1-216ENST00000592444 SMARCC1Q92922 1105 aaPredicted RBP7.43□□□□□ -1.22
ERCC1-216ENST00000592444 HHIPL1Q96JK4 782 aa7.43□□□□□ -1.22
ERCC1-216ENST00000592444 TRPM7Q96QT4 1865 aa7.43□□□□□ -1.22
ERCC1-216ENST00000592444 CENPFP49454 3210 aa7.42□□□□□ -1.22
ERCC1-216ENST00000592444 SOX1O00570 391 aaPredicted RBP7.42□□□□□ -1.22
ERCC1-216ENST00000592444 PTPN5P54829 565 aa7.42□□□□□ -1.22
ERCC1-216ENST00000592444 ITPK1Q13572 414 aa7.42□□□□□ -1.22
ERCC1-216ENST00000592444 LRCH3Q96II8 777 aa7.42□□□□□ -1.22
ERCC1-216ENST00000592444 KCNK17Q96T54 332 aa7.42□□□□□ -1.22
ERCC1-216ENST00000592444 HDAC9Q9UKV0 1011 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms